RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 CFAP44Q96MT7 982 aa13.46□□□□□ -0.25
CHKB-211ENST00000489453 RPS8P62241 208 aaKnown RBP13.45□□□□□ -0.26
CHKB-211ENST00000489453 CALD1Q05682 793 aaKnown RBP13.45□□□□□ -0.26
CHKB-211ENST00000489453 NOGQ13253 232 aa13.45□□□□□ -0.26
CHKB-211ENST00000489453 C2orf69Q8N8R5 385 aa13.45□□□□□ -0.26
CHKB-211ENST00000489453 ZC3H12CQ9C0D7 883 aaKnown RBP13.45□□□□□ -0.26
CHKB-211ENST00000489453 ANKIB1Q9P2G1 1089 aa13.45□□□□□ -0.26
CHKB-211ENST00000489453 POLLQ9UGP5 575 aa13.45□□□□□ -0.26
CHKB-211ENST00000489453 COL4A1P02462 1669 aa13.44□□□□□ -0.26
CHKB-211ENST00000489453 UFL1O94874 794 aa13.44□□□□□ -0.26
CHKB-211ENST00000489453 FAM161AQ3B820 660 aa13.44□□□□□ -0.26
CHKB-211ENST00000489453 ZBTB38Q8NAP3 1195 aaPredicted RBP13.44□□□□□ -0.26
CHKB-211ENST00000489453 TBC1D16Q8TBP0 767 aa13.44□□□□□ -0.26
CHKB-211ENST00000489453 MBIPQ9NS73 344 aa13.44□□□□□ -0.26
CHKB-211ENST00000489453 ADAMTS8Q9UP79 889 aa13.44□□□□□ -0.26
CHKB-211ENST00000489453 TRIM28Q13263 835 aaKnown RBP13.43□□□□□ -0.26
CHKB-211ENST00000489453 KIF4BQ2VIQ3 1234 aa13.43□□□□□ -0.26
CHKB-211ENST00000489453 CCDC152Q4G0S7 254 aa13.43□□□□□ -0.26
CHKB-211ENST00000489453 SULF1Q8IWU6 871 aa13.43□□□□□ -0.26
CHKB-211ENST00000489453 MYD88Q99836 296 aa13.43□□□□□ -0.26
CHKB-211ENST00000489453 GBA2Q9HCG7 927 aaPredicted RBP13.43□□□□□ -0.26
CHKB-211ENST00000489453 GGA1Q9UJY5 639 aa13.43□□□□□ -0.26
CHKB-211ENST00000489453 ADM5C9JUS6 153 aa13.42□□□□□ -0.26
CHKB-211ENST00000489453 DDX58O95786 925 aaKnown RBP13.42□□□□□ -0.26
CHKB-211ENST00000489453 GNAI1P63096 354 aa13.42□□□□□ -0.26
CHKB-211ENST00000489453 RGMBQ6NW40 437 aa13.42□□□□□ -0.26
CHKB-211ENST00000489453 CHMP4AQ9BY43 222 aa13.42□□□□□ -0.26
CHKB-211ENST00000489453 MCOLN1Q9GZU1 580 aa13.42□□□□□ -0.26
CHKB-211ENST00000489453 IFT57Q9NWB7 429 aa13.42□□□□□ -0.26
CHKB-211ENST00000489453 RTL9Q8NET4 1388 aa13.42□□□□□ -0.26
CHKB-211ENST00000489453 ELL2O00472 640 aaPredicted RBP13.41□□□□□ -0.26
CHKB-211ENST00000489453 ZNF157P51786 506 aaPredicted RBP13.41□□□□□ -0.26
CHKB-211ENST00000489453 MLLT1Q03111 559 aaPredicted RBP13.41□□□□□ -0.26
CHKB-211ENST00000489453 DGKZQ13574 1117 aa13.41□□□□□ -0.26
CHKB-211ENST00000489453 CCDC191Q8NCU4 936 aa13.41□□□□□ -0.26
CHKB-211ENST00000489453 CCDC102AQ96A19 550 aa13.41□□□□□ -0.26
CHKB-211ENST00000489453 CCDC85AQ96PX6 553 aaPredicted RBP13.41□□□□□ -0.26
CHKB-211ENST00000489453 SEC31BQ9NQW1 1179 aa13.41□□□□□ -0.26
CHKB-211ENST00000489453 KCNQ5Q9NR82 932 aa13.41□□□□□ -0.26
CHKB-211ENST00000489453 CWC25Q9NXE8 425 aaPredicted RBP13.41□□□□□ -0.26
CHKB-211ENST00000489453 GGA3Q9NZ52 723 aa13.41□□□□□ -0.26
CHKB-211ENST00000489453 PDE8AO60658 829 aa13.4□□□□□ -0.26
CHKB-211ENST00000489453 EGFRP00533 1210 aa13.4□□□□□ -0.26
CHKB-211ENST00000489453 VIL1P09327 827 aaKnown RBP13.4□□□□□ -0.26
CHKB-211ENST00000489453 DLK2Q6UY11 383 aa13.4□□□□□ -0.26
CHKB-211ENST00000489453 ANKRD18AQ8IVF6 992 aa13.4□□□□□ -0.26
CHKB-211ENST00000489453 PHAXQ9H814 394 aaKnown RBP13.4□□□□□ -0.26
CHKB-211ENST00000489453 PODXL2Q9NZ53 605 aa13.4□□□□□ -0.26
CHKB-211ENST00000489453 XDHP47989 1333 aa13.39□□□□□ -0.27
CHKB-211ENST00000489453 APAF1O14727 1248 aa13.39□□□□□ -0.27
CHKB-211ENST00000489453 PCCAP05165 728 aaPredicted RBP13.39□□□□□ -0.27
CHKB-211ENST00000489453 CCDC30Q5VVM6 783 aa13.39□□□□□ -0.27
CHKB-211ENST00000489453 CACNA1FO60840 1977 aa13.38□□□□□ -0.27
CHKB-211ENST00000489453 PAPPA2Q9BXP8 1791 aa13.38□□□□□ -0.27
CHKB-211ENST00000489453 ZNF853P0CG23 659 aa13.38□□□□□ -0.27
CHKB-211ENST00000489453 RSBN1LQ6PCB5 846 aaPredicted RBP13.38□□□□□ -0.27
CHKB-211ENST00000489453 AGBL3Q8NEM8 1001 aa13.38□□□□□ -0.27
CHKB-211ENST00000489453 JARID2Q92833 1246 aaPredicted RBP13.38□□□□□ -0.27
CHKB-211ENST00000489453 CDCA5Q96FF9 252 aa13.38□□□□□ -0.27
CHKB-211ENST00000489453 ZIC5Q96T25 663 aa13.38□□□□□ -0.27
CHKB-211ENST00000489453 CDC5LQ99459 802 aaKnown RBP13.38□□□□□ -0.27
CHKB-211ENST00000489453 METTL22Q9BUU2 404 aaPredicted RBP13.38□□□□□ -0.27
CHKB-211ENST00000489453 SAGE1Q9NXZ1 904 aa13.38□□□□□ -0.27
CHKB-211ENST00000489453 FAM155AB1AL88 458 aaPredicted RBP13.37□□□□□ -0.27
CHKB-211ENST00000489453 ATP2B4P23634 1241 aa13.37□□□□□ -0.27
CHKB-211ENST00000489453 KIF23Q02241 960 aaPredicted RBP13.37□□□□□ -0.27
CHKB-211ENST00000489453 NEXNQ0ZGT2 675 aa13.37□□□□□ -0.27
CHKB-211ENST00000489453 ANGEL2Q5VTE6 544 aaKnown RBP13.37□□□□□ -0.27
CHKB-211ENST00000489453 FBXW7Q969H0 707 aa13.37□□□□□ -0.27
CHKB-211ENST00000489453 ZNF609O15014 1411 aa13.37□□□□□ -0.27
CHKB-211ENST00000489453 USP17L3A6NCW0 530 aa13.36□□□□□ -0.27
CHKB-211ENST00000489453 USP17L4A6NCW7 530 aa13.36□□□□□ -0.27
CHKB-211ENST00000489453 USP17L8P0C7I0 530 aa13.36□□□□□ -0.27
CHKB-211ENST00000489453 CTSWP56202 376 aa13.36□□□□□ -0.27
CHKB-211ENST00000489453 SCARF1Q14162 830 aa13.36□□□□□ -0.27
CHKB-211ENST00000489453 USP17L1Q7RTZ2 530 aa13.36□□□□□ -0.27
CHKB-211ENST00000489453 STK31Q9BXU1 1019 aa13.36□□□□□ -0.27
CHKB-211ENST00000489453 PRKRIP1Q9H875 184 aaPredicted RBP13.36□□□□□ -0.27
CHKB-211ENST00000489453 MAP3K2Q9Y2U5 619 aa13.36□□□□□ -0.27
CHKB-211ENST00000489453 ASTN2O75129 1339 aaPredicted RBP13.36□□□□□ -0.27
CHKB-211ENST00000489453 TRPA1O75762 1119 aa13.35□□□□□ -0.27
CHKB-211ENST00000489453 SLC10A3P09131 477 aa13.35□□□□□ -0.27
CHKB-211ENST00000489453 ZNF280AP59817 542 aaPredicted RBP13.35□□□□□ -0.27
CHKB-211ENST00000489453 REM2Q8IYK8 340 aaPredicted RBP13.35□□□□□ -0.27
CHKB-211ENST00000489453 C8orf58Q8NAV2 365 aa13.35□□□□□ -0.27
CHKB-211ENST00000489453 MYOZ2Q9NPC6 264 aa13.35□□□□□ -0.27
CHKB-211ENST00000489453 RGS19P49795 217 aa13.34□□□□□ -0.27
CHKB-211ENST00000489453 FKBP1BP68106 108 aa13.34□□□□□ -0.27
CHKB-211ENST00000489453 TTLL12Q14166 644 aaPredicted RBP13.34□□□□□ -0.27
CHKB-211ENST00000489453 PODNQ7Z5L7 613 aa13.34□□□□□ -0.27
CHKB-211ENST00000489453 RNF186Q9NXI6 227 aa13.34□□□□□ -0.27
CHKB-211ENST00000489453 PITPNM2Q9BZ72 1349 aa13.34□□□□□ -0.27
CHKB-211ENST00000489453 MED23Q9ULK4 1368 aa13.33□□□□□ -0.27
CHKB-211ENST00000489453 PI4KAP2A4QPH2 592 aa13.33□□□□□ -0.28
CHKB-211ENST00000489453 IGHMBP2P38935 993 aaKnown RBP13.33□□□□□ -0.28
CHKB-211ENST00000489453 KSR2Q6VAB6 950 aa13.33□□□□□ -0.28
CHKB-211ENST00000489453 RASAL3Q86YV0 1011 aa13.33□□□□□ -0.28
CHKB-211ENST00000489453 OGFOD1Q8N543 542 aa13.33□□□□□ -0.28
CHKB-211ENST00000489453 PI4KAP1Q8N8J0 262 aa13.33□□□□□ -0.28
CHKB-211ENST00000489453 ZNF646O15015 1829 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms