RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 GIGYF2Q6Y7W6 1299 aaKnown RBP10.54□□□□□ -0.72
CSMD2-209ENST00000489419 ZBTB38Q8NAP3 1195 aaPredicted RBP10.54□□□□□ -0.72
CSMD2-209ENST00000489419 CEP126Q9P2H0 1117 aa10.54□□□□□ -0.72
CSMD2-209ENST00000489419 PLCH1Q4KWH8 1693 aa10.54□□□□□ -0.72
CSMD2-209ENST00000489419 STX6O43752 255 aa10.54□□□□□ -0.72
CSMD2-209ENST00000489419 RPS6KB1P23443 525 aa10.54□□□□□ -0.72
CSMD2-209ENST00000489419 LRRFIP1Q32MZ4 808 aaKnown RBP10.54□□□□□ -0.72
CSMD2-209ENST00000489419 ZSCAN23Q3MJ62 389 aa10.54□□□□□ -0.72
CSMD2-209ENST00000489419 CAVIN1Q6NZI2 390 aaKnown RBP10.54□□□□□ -0.72
CSMD2-209ENST00000489419 SMAP1Q8IYB5 467 aaPredicted RBP10.54□□□□□ -0.72
CSMD2-209ENST00000489419 GPT2Q8TD30 523 aa10.54□□□□□ -0.72
CSMD2-209ENST00000489419 CCDC9Q9Y3X0 531 aaKnown RBP10.54□□□□□ -0.72
CSMD2-209ENST00000489419 SPEF2Q9C093 1822 aa10.53□□□□□ -0.72
CSMD2-209ENST00000489419 SYT1P21579 422 aa10.53□□□□□ -0.72
CSMD2-209ENST00000489419 ZNF589Q86UQ0 364 aaPredicted RBP10.53□□□□□ -0.72
CSMD2-209ENST00000489419 SYAP1Q96A49 352 aaPredicted RBP10.53□□□□□ -0.72
CSMD2-209ENST00000489419 PAG1Q9NWQ8 432 aa10.53□□□□□ -0.72
CSMD2-209ENST00000489419 ZNF609O15014 1411 aa10.53□□□□□ -0.72
CSMD2-209ENST00000489419 ERVV-1B6SEH8 477 aa10.53□□□□□ -0.72
CSMD2-209ENST00000489419 NEUROD6Q96NK8 337 aa10.53□□□□□ -0.72
CSMD2-209ENST00000489419 THRAP3Q9Y2W1 955 aaKnown RBP10.53□□□□□ -0.72
CSMD2-209ENST00000489419 ABCC12Q96J65 1359 aa10.52□□□□□ -0.73
CSMD2-209ENST00000489419 HMGB1P09429 215 aaKnown RBP10.52□□□□□ -0.73
CSMD2-209ENST00000489419 CYP19A1P11511 503 aaPredicted RBP10.52□□□□□ -0.73
CSMD2-209ENST00000489419 CPA1P15085 419 aa10.52□□□□□ -0.73
CSMD2-209ENST00000489419 PDCP20941 246 aa10.52□□□□□ -0.73
CSMD2-209ENST00000489419 CSPP1Q1MSJ5 1256 aa10.52□□□□□ -0.73
CSMD2-209ENST00000489419 EDC3Q96F86 508 aaKnown RBP10.52□□□□□ -0.73
CSMD2-209ENST00000489419 DNAJC2Q99543 621 aaKnown RBP10.52□□□□□ -0.73
CSMD2-209ENST00000489419 DSCC1Q9BVC3 393 aa10.52□□□□□ -0.73
CSMD2-209ENST00000489419 PANK2Q9BZ23 570 aa10.52□□□□□ -0.73
CSMD2-209ENST00000489419 ITGB4P16144 1822 aa10.52□□□□□ -0.73
CSMD2-209ENST00000489419 A0A1B0GUL7 405 aa10.52□□□□□ -0.73
CSMD2-209ENST00000489419 TIMM10P62072 90 aa10.52□□□□□ -0.73
CSMD2-209ENST00000489419 ME3Q16798 604 aa10.52□□□□□ -0.73
CSMD2-209ENST00000489419 LRRC24Q50LG9 513 aa10.52□□□□□ -0.73
CSMD2-209ENST00000489419 ZMYM1Q5SVZ6 1142 aa10.52□□□□□ -0.73
CSMD2-209ENST00000489419 VGLL3A8MV65 326 aa10.51□□□□□ -0.73
CSMD2-209ENST00000489419 F13A1P00488 732 aa10.51□□□□□ -0.73
CSMD2-209ENST00000489419 IFIT1P09914 478 aaKnown RBP10.51□□□□□ -0.73
CSMD2-209ENST00000489419 GJB2P29033 226 aa10.51□□□□□ -0.73
CSMD2-209ENST00000489419 IFIT5Q13325 482 aaKnown RBP10.51□□□□□ -0.73
CSMD2-209ENST00000489419 CCDC83Q8IWF9 413 aa10.51□□□□□ -0.73
CSMD2-209ENST00000489419 ANP32BQ92688 251 aaKnown RBP10.51□□□□□ -0.73
CSMD2-209ENST00000489419 TPCN1Q9ULQ1 816 aa10.51□□□□□ -0.73
CSMD2-209ENST00000489419 IGSF3O75054 1194 aa10.5□□□□□ -0.73
CSMD2-209ENST00000489419 LARGE1O95461 756 aa10.5□□□□□ -0.73
CSMD2-209ENST00000489419 ZFYP08048 801 aaPredicted RBP10.5□□□□□ -0.73
CSMD2-209ENST00000489419 IL6STP40189 918 aaPredicted RBP10.5□□□□□ -0.73
CSMD2-209ENST00000489419 CCDC158Q5M9N0 1113 aa10.5□□□□□ -0.73
CSMD2-209ENST00000489419 FOXD4L5Q5VV16 416 aaPredicted RBP10.5□□□□□ -0.73
CSMD2-209ENST00000489419 LRSAM1Q6UWE0 723 aa10.5□□□□□ -0.73
CSMD2-209ENST00000489419 NLRP10Q86W26 655 aa10.5□□□□□ -0.73
CSMD2-209ENST00000489419 FOXD4L4Q8WXT5 416 aaPredicted RBP10.5□□□□□ -0.73
CSMD2-209ENST00000489419 AK7Q96M32 723 aa10.5□□□□□ -0.73
CSMD2-209ENST00000489419 NEK1Q96PY6 1258 aa10.5□□□□□ -0.73
CSMD2-209ENST00000489419 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.5□□□□□ -0.73
CSMD2-209ENST00000489419 RNF113AO15541 343 aaKnown RBP10.5□□□□□ -0.73
CSMD2-209ENST00000489419 PHF14O94880 888 aa10.5□□□□□ -0.73
CSMD2-209ENST00000489419 NASPP49321 788 aaPredicted RBP10.5□□□□□ -0.73
CSMD2-209ENST00000489419 DDX46Q7L014 1031 aaKnown RBP10.5□□□□□ -0.73
CSMD2-209ENST00000489419 ZNF594Q96JF6 807 aaPredicted RBP10.5□□□□□ -0.73
CSMD2-209ENST00000489419 ROBO1Q9Y6N7 1651 aa10.5□□□□□ -0.73
CSMD2-209ENST00000489419 GOLIM4O00461 696 aa10.49□□□□□ -0.73
CSMD2-209ENST00000489419 CCDC173Q0VFZ6 552 aa10.49□□□□□ -0.73
CSMD2-209ENST00000489419 GRIPAP1Q4V328 841 aa10.49□□□□□ -0.73
CSMD2-209ENST00000489419 USP48Q86UV5 1035 aa10.49□□□□□ -0.73
CSMD2-209ENST00000489419 CHMP4CQ96CF2 233 aa10.49□□□□□ -0.73
CSMD2-209ENST00000489419 PPP1R9BQ96SB3 815 aa10.49□□□□□ -0.73
CSMD2-209ENST00000489419 TMEM63CQ9P1W3 806 aa10.49□□□□□ -0.73
CSMD2-209ENST00000489419 MTMR6Q9Y217 621 aa10.49□□□□□ -0.73
CSMD2-209ENST00000489419 COL16A1Q07092 1604 aaPredicted RBP10.49□□□□□ -0.73
CSMD2-209ENST00000489419 TOB2Q14106 344 aaPredicted RBP10.49□□□□□ -0.73
CSMD2-209ENST00000489419 FAM89AQ96GI7 184 aa10.49□□□□□ -0.73
CSMD2-209ENST00000489419 ZNF512BQ96KM6 892 aaPredicted RBP10.49□□□□□ -0.73
CSMD2-209ENST00000489419 SLC4A9Q96Q91 983 aa10.49□□□□□ -0.73
CSMD2-209ENST00000489419 PUS3Q9BZE2 481 aaKnown RBP10.49□□□□□ -0.73
CSMD2-209ENST00000489419 LETM1O95202 739 aaPredicted RBP10.48□□□□□ -0.73
CSMD2-209ENST00000489419 UBE2HP62256 183 aa10.48□□□□□ -0.73
CSMD2-209ENST00000489419 ST3GAL1Q11201 340 aa10.48□□□□□ -0.73
CSMD2-209ENST00000489419 TMED8Q6PL24 325 aaPredicted RBP10.48□□□□□ -0.73
CSMD2-209ENST00000489419 TTLL11Q8NHH1 800 aa10.48□□□□□ -0.73
CSMD2-209ENST00000489419 XAGE2Q96GT9 111 aa10.48□□□□□ -0.73
CSMD2-209ENST00000489419 LARP6Q9BRS8 491 aaKnown RBP10.48□□□□□ -0.73
CSMD2-209ENST00000489419 RIPOR2Q9Y4F9 1068 aa10.48□□□□□ -0.73
CSMD2-209ENST00000489419 CYP21A2P08686 494 aa10.48□□□□□ -0.73
CSMD2-209ENST00000489419 CLCN1P35523 988 aa10.48□□□□□ -0.73
CSMD2-209ENST00000489419 MMP14P50281 582 aa10.48□□□□□ -0.73
CSMD2-209ENST00000489419 IRX3P78415 501 aaPredicted RBP10.48□□□□□ -0.73
CSMD2-209ENST00000489419 TTC39AQ5SRH9 613 aa10.48□□□□□ -0.73
CSMD2-209ENST00000489419 GORABQ5T7V8 394 aa10.48□□□□□ -0.73
CSMD2-209ENST00000489419 UTP14CQ5TAP6 766 aaKnown RBP10.48□□□□□ -0.73
CSMD2-209ENST00000489419 SEC62Q99442 399 aaKnown RBP10.48□□□□□ -0.73
CSMD2-209ENST00000489419 ZHX1Q9UKY1 873 aaPredicted RBP10.48□□□□□ -0.73
CSMD2-209ENST00000489419 ZNF330Q9Y3S2 320 aaPredicted RBP10.48□□□□□ -0.73
CSMD2-209ENST00000489419 WNK3Q9BYP7 1800 aa10.48□□□□□ -0.73
CSMD2-209ENST00000489419 ANKRD18BA2A2Z9 1011 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 PDE8AO60658 829 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 CTSWP56202 376 aa10.47□□□□□ -0.73
CSMD2-209ENST00000489419 HLFQ16534 295 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms