RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 G3BP1Q13283 466 aaKnown RBP eCLIP10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 FOXD4L5Q5VV16 416 aaPredicted RBP10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 KLHDC4Q8TBB5 520 aa10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 RHPN1Q8TCX5 695 aa10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 FOXD4L4Q8WXT5 416 aaPredicted RBP10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 ARHGEF1Q92888 912 aaKnown RBP10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 FBXO3Q9UK99 471 aa10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 NSFL1CQ9UNZ2 370 aaKnown RBP10.84□□□□□ -0.67
EXOSC1-211ENST00000489158 PDE8AO60658 829 aa10.83□□□□□ -0.68
EXOSC1-211ENST00000489158 PROM2Q8N271 834 aa10.83□□□□□ -0.68
EXOSC1-211ENST00000489158 FLAD1Q8NFF5 587 aa10.83□□□□□ -0.68
EXOSC1-211ENST00000489158 MAP7D2Q96T17 732 aa10.83□□□□□ -0.68
EXOSC1-211ENST00000489158 NYXQ9GZU5 481 aa10.83□□□□□ -0.68
EXOSC1-211ENST00000489158 IRS4O14654 1257 aaPredicted RBP10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 NTSR2O95665 410 aa10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 CSF1RP07333 972 aa10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 RFX5P48382 616 aaPredicted RBP10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 CSPP1Q1MSJ5 1256 aa10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 SUSD4Q5VX71 490 aa10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 USPL1Q5W0Q7 1092 aa10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 CASC1Q6TDU7 716 aa10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 BICDL1Q6ZP65 573 aa10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 SYNE4Q8N205 404 aa10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 CCDC85AQ96PX6 553 aaPredicted RBP10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 BCL2L12Q9HB09 334 aa10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 CCDC39Q9UFE4 941 aa10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 TUBGCP6Q96RT7 1819 aa10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 OSBPL3Q9H4L5 887 aa10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 SRP68Q9UHB9 627 aaKnown RBP10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 RTL9Q8NET4 1388 aa10.82□□□□□ -0.68
EXOSC1-211ENST00000489158 AOX1Q06278 1338 aa10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 MCM5P33992 734 aa10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 CTSWP56202 376 aa10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 PTPN12Q05209 780 aaKnown RBP10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 CCDC57Q2TAC2 916 aa10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 CLASRPQ8N2M8 674 aaKnown RBP10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 RNF214Q8ND24 703 aa10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 CASZ1Q86V15 1759 aa10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 LRP5O75197 1615 aa10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 RIC1Q4ADV7 1423 aa10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 CIAO1O76071 339 aa10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 SF3B2Q13435 895 aaKnown RBP10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 AMIGO3Q86WK7 504 aa10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 AKT1S1Q96B36 256 aa10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 SETDB2Q96T68 719 aa10.81□□□□□ -0.68
EXOSC1-211ENST00000489158 CARMIL3Q8ND23 1372 aa10.8□□□□□ -0.68
EXOSC1-211ENST00000489158 SALL3Q9BXA9 1300 aa10.8□□□□□ -0.68
EXOSC1-211ENST00000489158 GTF2E1P29083 439 aaPredicted RBP10.8□□□□□ -0.68
EXOSC1-211ENST00000489158 TAF7LQ5H9L4 462 aa10.8□□□□□ -0.68
EXOSC1-211ENST00000489158 TBC1D9BQ66K14 1250 aa10.8□□□□□ -0.68
EXOSC1-211ENST00000489158 NUTM1Q86Y26 1132 aa10.8□□□□□ -0.68
EXOSC1-211ENST00000489158 TTLL11Q8NHH1 800 aa10.8□□□□□ -0.68
EXOSC1-211ENST00000489158 DYNC1I1O14576 645 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 REC8O95072 547 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 MX1P20591 662 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 BAG6P46379 1132 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 PDE1AP54750 535 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 IFIT5Q13325 482 aaKnown RBP10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 SLC10A5Q5PT55 438 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 SASS6Q6UVJ0 657 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 CCDC125Q86Z20 511 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 ARID3AQ99856 593 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 ERC2O15083 957 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 NPHP1O15259 732 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 SASH1O94885 1247 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 HCLS1P14317 486 aaPredicted RBP10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 IL15P40933 162 aaPredicted RBP10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 TSHZ3Q63HK5 1081 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 UPF1Q92900 1129 aaKnown RBP eCLIP10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 ZNF594Q96JF6 807 aaPredicted RBP10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 STAP2Q9UGK3 403 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 PRDM4Q9UKN5 801 aa10.79□□□□□ -0.68
EXOSC1-211ENST00000489158 ANKRD18BA2A2Z9 1011 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 EYA2O00167 538 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 MBD3O95983 291 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 IFIT2P09913 472 aaKnown RBP10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 CCDC152Q4G0S7 254 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 TPTE2Q6XPS3 522 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 TMX3Q96JJ7 454 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 CAMKK2Q96RR4 588 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 GPR108Q9NPR9 543 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 TFCP2L1Q9NZI6 479 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 TTC41PQ6P2S7 1318 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 PTMAP06454 111 aaKnown RBP10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 NEK4P51957 841 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 AACSQ86V21 672 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 NBPF5PQ86XG9 351 aaPredicted RBP10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 GPATCH3Q96I76 525 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 TSPY26PQ9H489 355 aa10.78□□□□□ -0.68
EXOSC1-211ENST00000489158 GYS1P13807 737 aa10.77□□□□□ -0.69
EXOSC1-211ENST00000489158 ITGA6P23229 1130 aa10.77□□□□□ -0.69
EXOSC1-211ENST00000489158 SF3B3Q15393 1217 aaKnown RBP10.77□□□□□ -0.69
EXOSC1-211ENST00000489158 ZNF827Q17R98 1081 aa10.77□□□□□ -0.69
EXOSC1-211ENST00000489158 GREM2Q9H772 168 aa10.77□□□□□ -0.69
EXOSC1-211ENST00000489158 BRD1O95696 1058 aa10.76□□□□□ -0.69
EXOSC1-211ENST00000489158 TFCP2Q12800 502 aa10.76□□□□□ -0.69
EXOSC1-211ENST00000489158 MTERF4Q7Z6M4 381 aaKnown RBP10.76□□□□□ -0.69
EXOSC1-211ENST00000489158 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.76□□□□□ -0.69
EXOSC1-211ENST00000489158 NRXN2Q9P2S2 1712 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms