RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 CHGBP05060 677 aa21.83■■□□□ 1.09
POLR2J3-205ENST00000489144 ITGA6P23229 1130 aa21.83■■□□□ 1.09
POLR2J3-205ENST00000489144 USPL1Q5W0Q7 1092 aa21.83■■□□□ 1.09
POLR2J3-205ENST00000489144 CASC1Q6TDU7 716 aa21.83■■□□□ 1.09
POLR2J3-205ENST00000489144 TTLL11Q8NHH1 800 aa21.83■■□□□ 1.09
POLR2J3-205ENST00000489144 TBC1D2Q9BYX2 928 aa21.83■■□□□ 1.09
POLR2J3-205ENST00000489144 ANKRD36CQ5JPF3 1778 aa21.83■■□□□ 1.08
POLR2J3-205ENST00000489144 CTSWP56202 376 aa21.83■■□□□ 1.08
POLR2J3-205ENST00000489144 BCCIPQ9P287 314 aaKnown RBP eCLIP21.83■■□□□ 1.08
POLR2J3-205ENST00000489144 NOL7Q9UMY1 257 aaKnown RBP21.83■■□□□ 1.08
POLR2J3-205ENST00000489144 SBF2Q86WG5 1849 aa21.82■■□□□ 1.08
POLR2J3-205ENST00000489144 IRX5P78411 483 aaPredicted RBP21.82■■□□□ 1.08
POLR2J3-205ENST00000489144 IFIT5Q13325 482 aaKnown RBP21.82■■□□□ 1.08
POLR2J3-205ENST00000489144 EYA2O00167 538 aa21.81■■□□□ 1.08
POLR2J3-205ENST00000489144 GLRX3O76003 335 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-205ENST00000489144 CWC27Q6UX04 472 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-205ENST00000489144 DNAJC2Q99543 621 aaKnown RBP21.81■■□□□ 1.08
POLR2J3-205ENST00000489144 KIF2CQ99661 725 aa21.81■■□□□ 1.08
POLR2J3-205ENST00000489144 ESYT1Q9BSJ8 1104 aa21.81■■□□□ 1.08
POLR2J3-205ENST00000489144 TBC1D9BQ66K14 1250 aa21.8■■□□□ 1.08
POLR2J3-205ENST00000489144 USP26Q9BXU7 913 aa21.8■■□□□ 1.08
POLR2J3-205ENST00000489144 ANO2Q9NQ90 1003 aa21.8■■□□□ 1.08
POLR2J3-205ENST00000489144 SEC31BQ9NQW1 1179 aa21.8■■□□□ 1.08
POLR2J3-205ENST00000489144 ERC2O15083 957 aa21.8■■□□□ 1.08
POLR2J3-205ENST00000489144 SAMD1Q6SPF0 538 aaPredicted RBP21.8■■□□□ 1.08
POLR2J3-205ENST00000489144 GPATCH3Q96I76 525 aa21.8■■□□□ 1.08
POLR2J3-205ENST00000489144 UTP14AQ9BVJ6 771 aaKnown RBP21.8■■□□□ 1.08
POLR2J3-205ENST00000489144 BCL2L12Q9HB09 334 aa21.8■■□□□ 1.08
POLR2J3-205ENST00000489144 TTC41PQ6P2S7 1318 aa21.79■■□□□ 1.08
POLR2J3-205ENST00000489144 NASPP49321 788 aaPredicted RBP21.79■■□□□ 1.08
POLR2J3-205ENST00000489144 FAM196AQ6ZSG2 479 aa21.79■■□□□ 1.08
POLR2J3-205ENST00000489144 CNTROBQ8N137 903 aa21.79■■□□□ 1.08
POLR2J3-205ENST00000489144 HELBQ8NG08 1087 aaPredicted RBP21.79■■□□□ 1.08
POLR2J3-205ENST00000489144 AOX1Q06278 1338 aa21.79■■□□□ 1.08
POLR2J3-205ENST00000489144 SNAP23O00161 211 aa21.79■■□□□ 1.08
POLR2J3-205ENST00000489144 CD2BP2O95400 341 aaKnown RBP21.79■■□□□ 1.08
POLR2J3-205ENST00000489144 CSF1RP07333 972 aa21.79■■□□□ 1.08
POLR2J3-205ENST00000489144 RBM25P49756 843 aaKnown RBP21.79■■□□□ 1.08
POLR2J3-205ENST00000489144 C3orf67Q6ZVT6 689 aa21.79■■□□□ 1.08
POLR2J3-205ENST00000489144 AK9Q5TCS8 1911 aa21.79■■□□□ 1.08
POLR2J3-205ENST00000489144 SH3TC1Q8TE82 1336 aa21.78■■□□□ 1.08
POLR2J3-205ENST00000489144 USP42Q9H9J4 1324 aaKnown RBP21.78■■□□□ 1.08
POLR2J3-205ENST00000489144 RREB1Q92766 1687 aa21.78■■□□□ 1.08
POLR2J3-205ENST00000489144 ADORA1P30542 326 aa21.78■■□□□ 1.08
POLR2J3-205ENST00000489144 NTSR2O95665 410 aa21.77■■□□□ 1.08
POLR2J3-205ENST00000489144 LDHAL6AQ6ZMR3 332 aa21.77■■□□□ 1.08
POLR2J3-205ENST00000489144 ARHGEF1Q92888 912 aaKnown RBP21.77■■□□□ 1.08
POLR2J3-205ENST00000489144 CDHR2Q9BYE9 1310 aa21.77■■□□□ 1.08
POLR2J3-205ENST00000489144 CNTNAP4Q9C0A0 1308 aa21.77■■□□□ 1.08
POLR2J3-205ENST00000489144 PDE8AO60658 829 aa21.77■■□□□ 1.08
POLR2J3-205ENST00000489144 SLFNL1Q499Z3 407 aa21.77■■□□□ 1.08
POLR2J3-205ENST00000489144 ERFEQ4G0M1 354 aa21.77■■□□□ 1.08
POLR2J3-205ENST00000489144 RTCBQ9Y3I0 505 aaKnown RBP21.77■■□□□ 1.08
POLR2J3-205ENST00000489144 A0A1B0GUL7 405 aa21.76■■□□□ 1.07
POLR2J3-205ENST00000489144 IL15P40933 162 aaPredicted RBP21.76■■□□□ 1.07
POLR2J3-205ENST00000489144 PLA2G12BQ9BX93 195 aa21.76■■□□□ 1.07
POLR2J3-205ENST00000489144 CNNM1Q9NRU3 951 aa21.76■■□□□ 1.07
POLR2J3-205ENST00000489144 RPS6KA4O75676 772 aa21.75■■□□□ 1.07
POLR2J3-205ENST00000489144 FAM227BQ96M60 508 aa21.75■■□□□ 1.07
POLR2J3-205ENST00000489144 ANKRD18BA2A2Z9 1011 aa21.75■■□□□ 1.07
POLR2J3-205ENST00000489144 ATP2B3Q16720 1220 aa21.75■■□□□ 1.07
POLR2J3-205ENST00000489144 DDX46Q7L014 1031 aaKnown RBP21.75■■□□□ 1.07
POLR2J3-205ENST00000489144 AK7Q96M32 723 aa21.75■■□□□ 1.07
POLR2J3-205ENST00000489144 METTL24Q5JXM2 366 aa21.74■■□□□ 1.07
POLR2J3-205ENST00000489144 CEP126Q9P2H0 1117 aa21.74■■□□□ 1.07
POLR2J3-205ENST00000489144 ZNF652Q9Y2D9 606 aa21.74■■□□□ 1.07
POLR2J3-205ENST00000489144 ZPR1O75312 459 aa21.74■■□□□ 1.07
POLR2J3-205ENST00000489144 MMP14P50281 582 aa21.74■■□□□ 1.07
POLR2J3-205ENST00000489144 SKOR2Q2VWA4 1001 aaPredicted RBP21.74■■□□□ 1.07
POLR2J3-205ENST00000489144 FSD1Q9BTV5 496 aa21.74■■□□□ 1.07
POLR2J3-205ENST00000489144 SNRKQ9NRH2 765 aa21.74■■□□□ 1.07
POLR2J3-205ENST00000489144 FOXD4L1Q9NU39 408 aa21.74■■□□□ 1.07
POLR2J3-205ENST00000489144 PALD1Q9ULE6 856 aa21.74■■□□□ 1.07
POLR2J3-205ENST00000489144 COL4A1P02462 1669 aa21.73■■□□□ 1.07
POLR2J3-205ENST00000489144 DIAPH3Q9NSV4 1193 aa21.73■■□□□ 1.07
POLR2J3-205ENST00000489144 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.73■■□□□ 1.07
POLR2J3-205ENST00000489144 RBM6P78332 1123 aaKnown RBP21.73■■□□□ 1.07
POLR2J3-205ENST00000489144 REC8O95072 547 aa21.72■■□□□ 1.07
POLR2J3-205ENST00000489144 MCM5P33992 734 aa21.72■■□□□ 1.07
POLR2J3-205ENST00000489144 TAF5LO75529 589 aa21.72■■□□□ 1.07
POLR2J3-205ENST00000489144 MYH3P11055 1940 aa21.72■■□□□ 1.07
POLR2J3-205ENST00000489144 PI16Q6UXB8 463 aa21.72■■□□□ 1.07
POLR2J3-205ENST00000489144 CICQ96RK0 1608 aaPredicted RBP21.72■■□□□ 1.07
POLR2J3-205ENST00000489144 ZNF609O15014 1411 aa21.71■■□□□ 1.07
POLR2J3-205ENST00000489144 RIC1Q4ADV7 1423 aa21.71■■□□□ 1.07
POLR2J3-205ENST00000489144 RFC4P35249 363 aa21.71■■□□□ 1.07
POLR2J3-205ENST00000489144 PARP10Q53GL7 1025 aa21.71■■□□□ 1.07
POLR2J3-205ENST00000489144 ZNF772Q68DY9 489 aaPredicted RBP21.71■■□□□ 1.07
POLR2J3-205ENST00000489144 SLC51AQ86UW1 340 aa21.71■■□□□ 1.07
POLR2J3-205ENST00000489144 MYRIPQ8NFW9 859 aa21.71■■□□□ 1.07
POLR2J3-205ENST00000489144 NARFQ9UHQ1 456 aa21.71■■□□□ 1.07
POLR2J3-205ENST00000489144 TAF1P21675 1872 aa21.71■■□□□ 1.07
POLR2J3-205ENST00000489144 ABCC12Q96J65 1359 aa21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 TAF1LQ8IZX4 1826 aa21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 LY75O60449 1722 aa21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 WTIPA6NIX2 430 aaPredicted RBP21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 KCNJ4P48050 445 aa21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 NMIQ13287 307 aaPredicted RBP21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 RIPOR2Q9Y4F9 1068 aa21.7■■□□□ 1.06
POLR2J3-205ENST00000489144 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms