RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 MTMR7Q9Y216 660 aa11.48□□□□□ -0.57
TRAPPC12-221ENST00000489032 SPATA31E1Q6ZUB1 1445 aa11.48□□□□□ -0.57
TRAPPC12-221ENST00000489032 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.48□□□□□ -0.57
TRAPPC12-221ENST00000489032 NEXMIFQ5QGS0 1516 aa11.47□□□□□ -0.57
TRAPPC12-221ENST00000489032 RALGAPBQ86X10 1494 aa11.47□□□□□ -0.57
TRAPPC12-221ENST00000489032 PPP1R12BO60237 982 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC12-221ENST00000489032 BMP1P13497 986 aa11.47□□□□□ -0.57
TRAPPC12-221ENST00000489032 MTFR1Q15390 333 aa11.47□□□□□ -0.57
TRAPPC12-221ENST00000489032 GNASQ5JWF2 1037 aa11.47□□□□□ -0.57
TRAPPC12-221ENST00000489032 SLC9A9Q8IVB4 645 aa11.47□□□□□ -0.57
TRAPPC12-221ENST00000489032 TSPAN10Q9H1Z9 355 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC12-221ENST00000489032 CABP1Q9NZU7 370 aa11.47□□□□□ -0.57
TRAPPC12-221ENST00000489032 NALCNQ8IZF0 1738 aa11.46□□□□□ -0.57
TRAPPC12-221ENST00000489032 GLI3P10071 1580 aa11.46□□□□□ -0.57
TRAPPC12-221ENST00000489032 MYOM2P54296 1465 aa11.46□□□□□ -0.57
TRAPPC12-221ENST00000489032 IGFBP4P22692 258 aa11.46□□□□□ -0.57
TRAPPC12-221ENST00000489032 SSFA2P28290 1259 aa11.46□□□□□ -0.57
TRAPPC12-221ENST00000489032 RNF144AP50876 292 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC12-221ENST00000489032 UNC5CLQ8IV45 518 aa11.46□□□□□ -0.57
TRAPPC12-221ENST00000489032 CRIPAKQ8N1N5 446 aa11.46□□□□□ -0.57
TRAPPC12-221ENST00000489032 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.46□□□□□ -0.575e-13■■■■■ 311.6
TRAPPC12-221ENST00000489032 CXXC1Q9P0U4 656 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC12-221ENST00000489032 WEE1P30291 646 aa11.45□□□□□ -0.58
TRAPPC12-221ENST00000489032 KCNA1Q09470 495 aa11.45□□□□□ -0.58
TRAPPC12-221ENST00000489032 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
TRAPPC12-221ENST00000489032 ORAI2Q96SN7 254 aa11.45□□□□□ -0.58
TRAPPC12-221ENST00000489032 HRH3Q9Y5N1 445 aa11.45□□□□□ -0.58
TRAPPC12-221ENST00000489032 TTLL8A6PVC2 850 aa11.44□□□□□ -0.58
TRAPPC12-221ENST00000489032 FOXO3O43524 673 aa11.44□□□□□ -0.58
TRAPPC12-221ENST00000489032 CTSOP43234 321 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC12-221ENST00000489032 EPHA4P54764 986 aa11.44□□□□□ -0.58
TRAPPC12-221ENST00000489032 PSMA6P60900 246 aaKnown RBP11.44□□□□□ -0.58
TRAPPC12-221ENST00000489032 TBCELQ5QJ74 424 aa11.44□□□□□ -0.58
TRAPPC12-221ENST00000489032 NIFKQ9BYG3 293 aaKnown RBP11.44□□□□□ -0.58
TRAPPC12-221ENST00000489032 ZNF232Q9UNY5 417 aa11.44□□□□□ -0.58
TRAPPC12-221ENST00000489032 ARID4AP29374 1257 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC12-221ENST00000489032 R3HDM1Q15032 1099 aaKnown RBP11.43□□□□□ -0.58
TRAPPC12-221ENST00000489032 KRT27Q7Z3Y8 459 aa11.43□□□□□ -0.58
TRAPPC12-221ENST00000489032 CCER1Q8TC90 406 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC12-221ENST00000489032 DCAF11Q8TEB1 546 aa11.43□□□□□ -0.58
TRAPPC12-221ENST00000489032 RHBDD1Q8TEB9 315 aa11.43□□□□□ -0.58
TRAPPC12-221ENST00000489032 ZFP42Q96MM3 310 aa11.43□□□□□ -0.58
TRAPPC12-221ENST00000489032 SIN3AQ96ST3 1273 aa11.43□□□□□ -0.58
TRAPPC12-221ENST00000489032 FHDC1Q9C0D6 1143 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC12-221ENST00000489032 AAASQ9NRG9 546 aa11.43□□□□□ -0.58
TRAPPC12-221ENST00000489032 PPLO60437 1756 aa11.43□□□□□ -0.58
TRAPPC12-221ENST00000489032 METP08581 1390 aa11.42□□□□□ -0.58
TRAPPC12-221ENST00000489032 NRXN3Q9Y4C0 1643 aa11.42□□□□□ -0.58
TRAPPC12-221ENST00000489032 ST8SIA5O15466 376 aa11.42□□□□□ -0.58
TRAPPC12-221ENST00000489032 FOXK2Q01167 660 aa11.42□□□□□ -0.58
TRAPPC12-221ENST00000489032 OCLNQ16625 522 aa11.42□□□□□ -0.58
TRAPPC12-221ENST00000489032 LYSMD3Q7Z3D4 306 aa11.42□□□□□ -0.58
TRAPPC12-221ENST00000489032 TRIM46Q7Z4K8 759 aa11.42□□□□□ -0.58
TRAPPC12-221ENST00000489032 GRIP2Q9C0E4 1043 aa11.42□□□□□ -0.58
TRAPPC12-221ENST00000489032 NPHP3Q7Z494 1330 aa11.41□□□□□ -0.58
TRAPPC12-221ENST00000489032 ADGRF5Q8IZF2 1346 aa11.41□□□□□ -0.58
TRAPPC12-221ENST00000489032 CLSPNQ9HAW4 1339 aa11.41□□□□□ -0.58
TRAPPC12-221ENST00000489032 SLIT2O94813 1529 aa11.41□□□□□ -0.58
TRAPPC12-221ENST00000489032 SERTM1A2A2V5 107 aa11.41□□□□□ -0.58
TRAPPC12-221ENST00000489032 PTCD1O75127 700 aaKnown RBP11.41□□□□□ -0.58
TRAPPC12-221ENST00000489032 Q6ZNB5 142 aa11.41□□□□□ -0.58
TRAPPC12-221ENST00000489032 PRICKLE2Q7Z3G6 844 aa11.41□□□□□ -0.58
TRAPPC12-221ENST00000489032 C1orf216Q8TAB5 229 aa11.41□□□□□ -0.58
TRAPPC12-221ENST00000489032 ATP13A2Q9NQ11 1180 aa11.41□□□□□ -0.58
TRAPPC12-221ENST00000489032 FIGNL2A6NMB9 653 aa11.4□□□□□ -0.58
TRAPPC12-221ENST00000489032 FOXD4L5Q5VV16 416 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC12-221ENST00000489032 MKNK1Q9BUB5 465 aa11.4□□□□□ -0.58
TRAPPC12-221ENST00000489032 IFT172Q9UG01 1749 aa11.4□□□□□ -0.58
TRAPPC12-221ENST00000489032 TONSLQ96HA7 1378 aa11.4□□□□□ -0.59
TRAPPC12-221ENST00000489032 TAS1R3Q7RTX0 852 aa11.39□□□□□ -0.59
TRAPPC12-221ENST00000489032 RNF217Q8TC41 542 aa11.39□□□□□ -0.59
TRAPPC12-221ENST00000489032 SENP3-EIF4A1A0A087X0R7 540 aa11.38□□□□□ -0.59
TRAPPC12-221ENST00000489032 C21orf2O43822 256 aa11.38□□□□□ -0.59
TRAPPC12-221ENST00000489032 MAN1A2O60476 641 aa11.38□□□□□ -0.59
TRAPPC12-221ENST00000489032 NOS2P35228 1153 aa11.38□□□□□ -0.59
TRAPPC12-221ENST00000489032 FKBP5Q13451 457 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC12-221ENST00000489032 TEAD4Q15561 434 aa11.38□□□□□ -0.59
TRAPPC12-221ENST00000489032 VPS72Q15906 364 aa11.38□□□□□ -0.59
TRAPPC12-221ENST00000489032 STAG2Q8N3U4 1231 aa11.38□□□□□ -0.59
TRAPPC12-221ENST00000489032 L3MBTL2Q969R5 705 aa11.38□□□□□ -0.59
TRAPPC12-221ENST00000489032 AIDAQ96BJ3 306 aa11.38□□□□□ -0.59
TRAPPC12-221ENST00000489032 SENP2Q9HC62 589 aa11.38□□□□□ -0.59
TRAPPC12-221ENST00000489032 IQSEC3Q9UPP2 1182 aaPredicted RBP11.38□□□□□ -0.59
TRAPPC12-221ENST00000489032 CCDC9Q9Y3X0 531 aaKnown RBP11.38□□□□□ -0.59
TRAPPC12-221ENST00000489032 PIK3C2GO75747 1445 aa11.37□□□□□ -0.59
TRAPPC12-221ENST00000489032 PHKA2P46019 1235 aa11.37□□□□□ -0.59
TRAPPC12-221ENST00000489032 PLA2G4AP47712 749 aa11.37□□□□□ -0.59
TRAPPC12-221ENST00000489032 POU4F2Q12837 409 aa11.37□□□□□ -0.59
TRAPPC12-221ENST00000489032 PHLDB3Q6NSJ2 640 aa11.37□□□□□ -0.59
TRAPPC12-221ENST00000489032 USP3Q9Y6I4 520 aa11.37□□□□□ -0.59
TRAPPC12-221ENST00000489032 RGPD1P0DJD0 1748 aa11.37□□□□□ -0.59
TRAPPC12-221ENST00000489032 PXDNQ92626 1479 aa11.37□□□□□ -0.59
TRAPPC12-221ENST00000489032 SPATA31C2B4DYI2 1134 aa11.36□□□□□ -0.59
TRAPPC12-221ENST00000489032 NBPF1Q3BBV0 1214 aa11.36□□□□□ -0.59
TRAPPC12-221ENST00000489032 KIFC2Q96AC6 838 aa11.36□□□□□ -0.59
TRAPPC12-221ENST00000489032 C2orf49Q9BVC5 232 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC12-221ENST00000489032 C14orf93Q9H972 538 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-221ENST00000489032 PARP3Q9Y6F1 533 aa11.36□□□□□ -0.59
TRAPPC12-221ENST00000489032 LRPPRCP42704 1394 aaKnown RBP11.36□□□□□ -0.59
TRAPPC12-221ENST00000489032 NRXN1Q9ULB1 1477 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms