RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 GBA2Q9HCG7 927 aaPredicted RBP14.93□□□□□ -0.02
USP11-210ENST00000489030 TRIM35Q9UPQ4 493 aa14.93□□□□□ -0.02
USP11-210ENST00000489030 LAS1LQ9Y4W2 734 aaKnown RBP14.93□□□□□ -0.02
USP11-210ENST00000489030 C6orf229H3BNL8 230 aa14.92□□□□□ -0.02
USP11-210ENST00000489030 WDR43Q15061 677 aaKnown RBP eCLIP14.92□□□□□ -0.02
USP11-210ENST00000489030 PLBD2Q8NHP8 589 aa14.92□□□□□ -0.02
USP11-210ENST00000489030 TBC1D16Q8TBP0 767 aa14.92□□□□□ -0.02
USP11-210ENST00000489030 SEC31BQ9NQW1 1179 aa14.92□□□□□ -0.02
USP11-210ENST00000489030 BABAM1Q9NWV8 329 aa14.92□□□□□ -0.02
USP11-210ENST00000489030 SCAF8Q9UPN6 1271 aaKnown RBP14.92□□□□□ -0.02
USP11-210ENST00000489030 PDE4DIPQ5VU43 2346 aa14.91□□□□□ -0.02
USP11-210ENST00000489030 JARID2Q92833 1246 aaPredicted RBP14.91□□□□□ -0.02
USP11-210ENST00000489030 RNF186Q9NXI6 227 aa14.91□□□□□ -0.02
USP11-210ENST00000489030 WTIPA6NIX2 430 aaPredicted RBP14.9□□□□□ -0.02
USP11-210ENST00000489030 SOX10P56693 466 aa14.9□□□□□ -0.02
USP11-210ENST00000489030 KIF4BQ2VIQ3 1234 aa14.9□□□□□ -0.02
USP11-210ENST00000489030 HDGFL1Q5TGJ6 251 aa14.9□□□□□ -0.02
USP11-210ENST00000489030 ANKRD13DQ6ZTN6 518 aa14.9□□□□□ -0.02
USP11-210ENST00000489030 PNNQ9H307 717 aaKnown RBP14.9□□□□□ -0.02
USP11-210ENST00000489030 GGA3Q9NZ52 723 aa14.9□□□□□ -0.02
USP11-210ENST00000489030 IRS4O14654 1257 aaPredicted RBP14.89□□□□□ -0.03
USP11-210ENST00000489030 TRPA1O75762 1119 aa14.89□□□□□ -0.03
USP11-210ENST00000489030 SLC10A3P09131 477 aa14.89□□□□□ -0.03
USP11-210ENST00000489030 ZNF157P51786 506 aaPredicted RBP14.89□□□□□ -0.03
USP11-210ENST00000489030 MOB2Q70IA6 237 aa14.89□□□□□ -0.03
USP11-210ENST00000489030 TMC4Q7Z404 712 aa14.89□□□□□ -0.03
USP11-210ENST00000489030 CDCA5Q96FF9 252 aa14.89□□□□□ -0.03
USP11-210ENST00000489030 TNRC18O15417 2968 aaPredicted RBP14.88□□□□□ -0.03
USP11-210ENST00000489030 VIL1P09327 827 aaKnown RBP14.88□□□□□ -0.03
USP11-210ENST00000489030 RPS8P62241 208 aaKnown RBP14.88□□□□□ -0.03
USP11-210ENST00000489030 FAM9BQ8IZU0 186 aa14.88□□□□□ -0.03
USP11-210ENST00000489030 C2orf69Q8N8R5 385 aa14.88□□□□□ -0.03
USP11-210ENST00000489030 DCPSQ96C86 337 aaKnown RBP14.88□□□□□ -0.03
USP11-210ENST00000489030 CCDC85AQ96PX6 553 aaPredicted RBP14.88□□□□□ -0.03
USP11-210ENST00000489030 CSRNP1Q96S65 589 aa14.88□□□□□ -0.03
USP11-210ENST00000489030 RPS12P25398 132 aaKnown RBP14.87□□□□□ -0.03
USP11-210ENST00000489030 LMOD3Q0VAK6 560 aa14.87□□□□□ -0.03
USP11-210ENST00000489030 DUSP27Q5VZP5 1158 aa14.87□□□□□ -0.03
USP11-210ENST00000489030 PHAXQ9H814 394 aaKnown RBP14.87□□□□□ -0.03
USP11-210ENST00000489030 UFL1O94874 794 aa14.86□□□□□ -0.03
USP11-210ENST00000489030 PRAMEF18Q5VWM3 479 aa14.86□□□□□ -0.03
USP11-210ENST00000489030 RASAL3Q86YV0 1011 aa14.86□□□□□ -0.03
USP11-210ENST00000489030 ADAMTS8Q9UP79 889 aa14.86□□□□□ -0.03
USP11-210ENST00000489030 ZNF280AP59817 542 aaPredicted RBP14.85□□□□□ -0.03
USP11-210ENST00000489030 TRIM28Q13263 835 aaKnown RBP14.85□□□□□ -0.03
USP11-210ENST00000489030 SCARF1Q14162 830 aa14.85□□□□□ -0.03
USP11-210ENST00000489030 ANGEL2Q5VTE6 544 aaKnown RBP14.85□□□□□ -0.03
USP11-210ENST00000489030 CCDC102AQ96A19 550 aa14.85□□□□□ -0.03
USP11-210ENST00000489030 GMLQ99445 158 aa14.85□□□□□ -0.03
USP11-210ENST00000489030 EYA3Q99504 573 aa14.85□□□□□ -0.03
USP11-210ENST00000489030 MXD3Q9BW11 206 aa14.85□□□□□ -0.03
USP11-210ENST00000489030 MBIPQ9NS73 344 aa14.85□□□□□ -0.03
USP11-210ENST00000489030 SAGE1Q9NXZ1 904 aa14.85□□□□□ -0.03
USP11-210ENST00000489030 PODXL2Q9NZ53 605 aa14.85□□□□□ -0.03
USP11-210ENST00000489030 DBF4Q9UBU7 674 aaPredicted RBP14.85□□□□□ -0.03
USP11-210ENST00000489030 SULF1Q8IWU6 871 aa14.84□□□□□ -0.03
USP11-210ENST00000489030 ELL2O00472 640 aaPredicted RBP14.83□□□□□ -0.04
USP11-210ENST00000489030 RSBN1LQ6PCB5 846 aaPredicted RBP14.83□□□□□ -0.04
USP11-210ENST00000489030 ZBTB38Q8NAP3 1195 aaPredicted RBP14.83□□□□□ -0.04
USP11-210ENST00000489030 MYD88Q99836 296 aa14.83□□□□□ -0.04
USP11-210ENST00000489030 ZC3H12CQ9C0D7 883 aaKnown RBP14.83□□□□□ -0.04
USP11-210ENST00000489030 ANKIB1Q9P2G1 1089 aa14.83□□□□□ -0.04
USP11-210ENST00000489030 GGA1Q9UJY5 639 aa14.83□□□□□ -0.04
USP11-210ENST00000489030 HOXB7P09629 217 aa14.82□□□□□ -0.04
USP11-210ENST00000489030 RIC3Q7Z5B4 369 aa14.82□□□□□ -0.04
USP11-210ENST00000489030 RUNDC1Q96C34 613 aa14.82□□□□□ -0.04
USP11-210ENST00000489030 HYPKQ9NX55 129 aa14.82□□□□□ -0.04
USP11-210ENST00000489030 UBE2Q2LH0YL09 131 aa14.81□□□□□ -0.04
USP11-210ENST00000489030 TBC1D8O95759 1140 aa14.81□□□□□ -0.04
USP11-210ENST00000489030 ZNF853P0CG23 659 aa14.81□□□□□ -0.04
USP11-210ENST00000489030 NBPF9Q3BBW0 867 aa14.8□□□□□ -0.04
USP11-210ENST00000489030 CTU1Q7Z7A3 348 aaKnown RBP14.8□□□□□ -0.04
USP11-210ENST00000489030 AGBL3Q8NEM8 1001 aa14.8□□□□□ -0.04
USP11-210ENST00000489030 MYOZ2Q9NPC6 264 aa14.8□□□□□ -0.04
USP11-210ENST00000489030 ZNF609O15014 1411 aa14.8□□□□□ -0.04
USP11-210ENST00000489030 PCCAP05165 728 aaPredicted RBP14.79□□□□□ -0.04
USP11-210ENST00000489030 USP17L8P0C7I0 530 aa14.79□□□□□ -0.04
USP11-210ENST00000489030 MKRN3Q13064 507 aaKnown RBP14.79□□□□□ -0.04
USP11-210ENST00000489030 C8orf58Q8NAV2 365 aa14.79□□□□□ -0.04
USP11-210ENST00000489030 R3HDMLQ9H3Y0 253 aa14.79□□□□□ -0.04
USP11-210ENST00000489030 AKAP11Q9UKA4 1901 aa14.79□□□□□ -0.04
USP11-210ENST00000489030 HPS5Q9UPZ3 1129 aa14.79□□□□□ -0.04
USP11-210ENST00000489030 PAPPA2Q9BXP8 1791 aa14.78□□□□□ -0.04
USP11-210ENST00000489030 G3V3G9 751 aa14.78□□□□□ -0.04
USP11-210ENST00000489030 KLRK1P26718 216 aa14.78□□□□□ -0.04
USP11-210ENST00000489030 GOLGA2Q08379 1002 aa14.78□□□□□ -0.04
USP11-210ENST00000489030 DCAF8Q5TAQ9 597 aa14.78□□□□□ -0.04
USP11-210ENST00000489030 TXNRD3Q86VQ6 643 aa14.78□□□□□ -0.04
USP11-210ENST00000489030 ZNF296Q8WUU4 475 aaPredicted RBP14.78□□□□□ -0.04
USP11-210ENST00000489030 XDHP47989 1333 aa14.77□□□□□ -0.04
USP11-210ENST00000489030 USP17L3A6NCW0 530 aa14.77□□□□□ -0.05
USP11-210ENST00000489030 USP17L4A6NCW7 530 aa14.77□□□□□ -0.05
USP11-210ENST00000489030 PDE8AO60658 829 aa14.77□□□□□ -0.05
USP11-210ENST00000489030 CCDC152Q4G0S7 254 aa14.77□□□□□ -0.05
USP11-210ENST00000489030 USP17L1Q7RTZ2 530 aa14.77□□□□□ -0.05
USP11-210ENST00000489030 TSPYL6Q8N831 410 aa14.77□□□□□ -0.05
USP11-210ENST00000489030 FZD1Q9UP38 647 aa14.77□□□□□ -0.05
USP11-210ENST00000489030 PSME4Q14997 1843 aa14.77□□□□□ -0.05
USP11-210ENST00000489030 ZNF646O15015 1829 aaPredicted RBP14.76□□□□□ -0.05
USP11-210ENST00000489030 SASH1O94885 1247 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms