RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 UFL1O94874 794 aa15.25■□□□□ 0.03
CCHCR1-215ENST00000488920 GCKRQ14397 625 aa15.25■□□□□ 0.03
CCHCR1-215ENST00000488920 IFFO2Q5TF58 517 aa15.25■□□□□ 0.03
CCHCR1-215ENST00000488920 DNAAF4Q8WXU2 420 aa15.25■□□□□ 0.03
CCHCR1-215ENST00000488920 GREM2Q9H772 168 aa15.25■□□□□ 0.03
CCHCR1-215ENST00000488920 PODXL2Q9NZ53 605 aa15.25■□□□□ 0.03
CCHCR1-215ENST00000488920 CNOT7Q9UIV1 285 aaKnown RBP15.25■□□□□ 0.03
CCHCR1-215ENST00000488920 GGA1Q9UJY5 639 aa15.25■□□□□ 0.03
CCHCR1-215ENST00000488920 PCNTO95613 3336 aa15.25■□□□□ 0.03
CCHCR1-215ENST00000488920 TRAF5O00463 557 aa15.24■□□□□ 0.03
CCHCR1-215ENST00000488920 CDC5LQ99459 802 aaKnown RBP15.24■□□□□ 0.03
CCHCR1-215ENST00000488920 F6X3S4 739 aa15.23■□□□□ 0.03
CCHCR1-215ENST00000488920 G3V3G9 751 aa15.23■□□□□ 0.03
CCHCR1-215ENST00000488920 H7C1D1 291 aa15.23■□□□□ 0.03
CCHCR1-215ENST00000488920 HIRAP54198 1017 aaPredicted RBP15.23■□□□□ 0.03
CCHCR1-215ENST00000488920 DCAF8Q5TAQ9 597 aa15.23■□□□□ 0.03
CCHCR1-215ENST00000488920 MICALL2Q8IY33 904 aa15.23■□□□□ 0.03
CCHCR1-215ENST00000488920 LINS1Q8NG48 757 aa15.23■□□□□ 0.03
CCHCR1-215ENST00000488920 ADAMTSL1Q8N6G6 1762 aa15.23■□□□□ 0.03
CCHCR1-215ENST00000488920 CNTNAP1P78357 1384 aa15.23■□□□□ 0.03
CCHCR1-215ENST00000488920 WTIPA6NIX2 430 aaPredicted RBP15.22■□□□□ 0.03
CCHCR1-215ENST00000488920 HSPA1AP0DMV8 641 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-215ENST00000488920 HSPA1BP0DMV9 641 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-215ENST00000488920 VEGFBP49765 207 aa15.22■□□□□ 0.03
CCHCR1-215ENST00000488920 TRPM4Q8TD43 1214 aa15.22■□□□□ 0.03
CCHCR1-215ENST00000488920 ABT1Q9ULW3 272 aaKnown RBP15.22■□□□□ 0.03
CCHCR1-215ENST00000488920 LRRC37AA6NMS7 1700 aa15.22■□□□□ 0.03
CCHCR1-215ENST00000488920 XDHP47989 1333 aa15.21■□□□□ 0.03
CCHCR1-215ENST00000488920 ATP2B4P23634 1241 aa15.21■□□□□ 0.03
CCHCR1-215ENST00000488920 CASP7P55210 303 aa15.21■□□□□ 0.03
CCHCR1-215ENST00000488920 DEFB115Q30KQ5 88 aa15.21■□□□□ 0.03
CCHCR1-215ENST00000488920 CST9Q5W186 159 aa15.21■□□□□ 0.03
CCHCR1-215ENST00000488920 SAMD7Q7Z3H4 446 aa15.21■□□□□ 0.03
CCHCR1-215ENST00000488920 DPF2Q92785 391 aa15.21■□□□□ 0.03
CCHCR1-215ENST00000488920 BSDC1Q9NW68 430 aaPredicted RBP15.21■□□□□ 0.03
CCHCR1-215ENST00000488920 PGAP2Q9UHJ9 254 aa15.21■□□□□ 0.03
CCHCR1-215ENST00000488920 MINPP1Q9UNW1 487 aa15.21■□□□□ 0.03
CCHCR1-215ENST00000488920 RTL9Q8NET4 1388 aa15.21■□□□□ 0.02
CCHCR1-215ENST00000488920 RBM26Q5T8P6 1007 aaKnown RBP15.2■□□□□ 0.02
CCHCR1-215ENST00000488920 COL13A1Q5TAT6 717 aaPredicted RBP15.2■□□□□ 0.02
CCHCR1-215ENST00000488920 PLA2G12BQ9BX93 195 aa15.2■□□□□ 0.02
CCHCR1-215ENST00000488920 GLIS2Q9BZE0 524 aaPredicted RBP15.2■□□□□ 0.02
CCHCR1-215ENST00000488920 ZNF521Q96K83 1311 aa15.19■□□□□ 0.02
CCHCR1-215ENST00000488920 CSF1RP07333 972 aa15.19■□□□□ 0.02
CCHCR1-215ENST00000488920 VIL1P09327 827 aaKnown RBP15.19■□□□□ 0.02
CCHCR1-215ENST00000488920 ITGA6P23229 1130 aa15.19■□□□□ 0.02
CCHCR1-215ENST00000488920 RPS12P25398 132 aaKnown RBP15.19■□□□□ 0.02
CCHCR1-215ENST00000488920 IGHMBP2P38935 993 aaKnown RBP15.19■□□□□ 0.02
CCHCR1-215ENST00000488920 FAM161AQ3B820 660 aa15.19■□□□□ 0.02
CCHCR1-215ENST00000488920 TBC1D10BQ4KMP7 808 aaPredicted RBP15.19■□□□□ 0.02
CCHCR1-215ENST00000488920 BEND3Q5T5X7 828 aa15.19■□□□□ 0.02
CCHCR1-215ENST00000488920 ZC3H15Q8WU90 426 aaKnown RBP15.19■□□□□ 0.02
CCHCR1-215ENST00000488920 RASSF10A6NK89 507 aa15.18■□□□□ 0.02
CCHCR1-215ENST00000488920 EGFRP00533 1210 aa15.18■□□□□ 0.02
CCHCR1-215ENST00000488920 CELF2O95319 508 aaKnown RBP15.17■□□□□ 0.02
CCHCR1-215ENST00000488920 CCT4P50991 539 aaKnown RBP15.17■□□□□ 0.02
CCHCR1-215ENST00000488920 FOXO4P98177 505 aa15.17■□□□□ 0.02
CCHCR1-215ENST00000488920 SLC4A10Q6U841 1118 aa15.17■□□□□ 0.02
CCHCR1-215ENST00000488920 CDC37L1Q7L3B6 337 aa15.17■□□□□ 0.02
CCHCR1-215ENST00000488920 USP48Q86UV5 1035 aa15.17■□□□□ 0.02
CCHCR1-215ENST00000488920 MPHOSPH8Q99549 860 aa15.17■□□□□ 0.02
CCHCR1-215ENST00000488920 DLK2Q6UY11 383 aa15.16■□□□□ 0.02
CCHCR1-215ENST00000488920 PAXIP1Q6ZW49 1069 aaPredicted RBP15.16■□□□□ 0.02
CCHCR1-215ENST00000488920 ZNF408Q9H9D4 720 aa15.16■□□□□ 0.02
CCHCR1-215ENST00000488920 CHMP3Q9Y3E7 222 aa15.16■□□□□ 0.02
CCHCR1-215ENST00000488920 WDR33Q9C0J8 1336 aaKnown RBP15.16■□□□□ 0.02
CCHCR1-215ENST00000488920 ANKRD18BA2A2Z9 1011 aa15.15■□□□□ 0.02
CCHCR1-215ENST00000488920 USP17L3A6NCW0 530 aa15.15■□□□□ 0.02
CCHCR1-215ENST00000488920 USP17L4A6NCW7 530 aa15.15■□□□□ 0.02
CCHCR1-215ENST00000488920 GRM1Q13255 1194 aa15.15■□□□□ 0.02
CCHCR1-215ENST00000488920 RSBN1LQ6PCB5 846 aaPredicted RBP15.15■□□□□ 0.02
CCHCR1-215ENST00000488920 USP17L1Q7RTZ2 530 aa15.15■□□□□ 0.02
CCHCR1-215ENST00000488920 PODNQ7Z5L7 613 aa15.15■□□□□ 0.02
CCHCR1-215ENST00000488920 LEMD3Q9Y2U8 911 aa15.15■□□□□ 0.02
CCHCR1-215ENST00000488920 E9PSI1 815 aa15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 GRM8O00222 908 aa15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 FOXN1O15353 648 aa15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 IFIT5Q13325 482 aaKnown RBP15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 KIF4BQ2VIQ3 1234 aa15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 EPHA10Q5JZY3 1008 aa15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 CYP4F22Q6NT55 531 aa15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 LMBR1LQ6UX01 489 aa15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 TXNRD3Q86VQ6 643 aa15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 AGBL3Q8NEM8 1001 aa15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 CAPNS2Q96L46 248 aa15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 ANKRD2Q9GZV1 360 aa15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 C9orf78Q9NZ63 289 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 TLL2Q9Y6L7 1015 aa15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 ZNF804BA4D1E1 1349 aa15.14■□□□□ 0.01
CCHCR1-215ENST00000488920 MED23Q9ULK4 1368 aa15.13■□□□□ 0.01
CCHCR1-215ENST00000488920 ALDH1L1O75891 902 aa15.13■□□□□ 0.01
CCHCR1-215ENST00000488920 KLRK1P26718 216 aa15.13■□□□□ 0.01
CCHCR1-215ENST00000488920 ZNF280AP59817 542 aaPredicted RBP15.13■□□□□ 0.01
CCHCR1-215ENST00000488920 CHRNDQ07001 517 aa15.13■□□□□ 0.01
CCHCR1-215ENST00000488920 SLFN5Q08AF3 891 aa15.13■□□□□ 0.01
CCHCR1-215ENST00000488920 KRT26Q7Z3Y9 468 aa15.13■□□□□ 0.01
CCHCR1-215ENST00000488920 MRPL50Q8N5N7 158 aaKnown RBP15.13■□□□□ 0.01
CCHCR1-215ENST00000488920 HELBQ8NG08 1087 aaPredicted RBP15.13■□□□□ 0.01
CCHCR1-215ENST00000488920 FBXW7Q969H0 707 aa15.13■□□□□ 0.01
CCHCR1-215ENST00000488920 DCPSQ96C86 337 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms