RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 POLRMTO00411 1230 aaKnown RBP13.35□□□□□ -0.27
COL21A1-211ENST00000488912 ERC2O15083 957 aa13.35□□□□□ -0.27
COL21A1-211ENST00000488912 GLRX3O76003 335 aaKnown RBP13.35□□□□□ -0.27
COL21A1-211ENST00000488912 SERPINB2P05120 415 aa13.35□□□□□ -0.27
COL21A1-211ENST00000488912 TIMM10P62072 90 aa13.35□□□□□ -0.27
COL21A1-211ENST00000488912 A0A1B0GUL7 405 aa13.35□□□□□ -0.27
COL21A1-211ENST00000488912 MAP4K4O95819 1239 aaPredicted RBP13.35□□□□□ -0.27
COL21A1-211ENST00000488912 VGLL2Q8N8G2 317 aa13.35□□□□□ -0.27
COL21A1-211ENST00000488912 NEUROD6Q96NK8 337 aa13.35□□□□□ -0.27
COL21A1-211ENST00000488912 MPHOSPH8Q99549 860 aa13.35□□□□□ -0.27
COL21A1-211ENST00000488912 STK32BQ9NY57 414 aa13.35□□□□□ -0.27
COL21A1-211ENST00000488912 NRXN2Q9P2S2 1712 aa13.35□□□□□ -0.27
COL21A1-211ENST00000488912 IGHMBP2P38935 993 aaKnown RBP13.34□□□□□ -0.27
COL21A1-211ENST00000488912 NLGN1Q8N2Q7 840 aa13.34□□□□□ -0.27
COL21A1-211ENST00000488912 RILPL2Q969X0 211 aa13.34□□□□□ -0.27
COL21A1-211ENST00000488912 CDC5LQ99459 802 aaKnown RBP13.34□□□□□ -0.27
COL21A1-211ENST00000488912 ARAP2Q8WZ64 1704 aa13.34□□□□□ -0.27
COL21A1-211ENST00000488912 ANKRD31Q8N7Z5 1873 aa13.34□□□□□ -0.27
COL21A1-211ENST00000488912 AKAP2Q9Y2D5 859 aa13.33□□□□□ -0.28
COL21A1-211ENST00000488912 MROH5Q6ZUA9 1318 aa13.33□□□□□ -0.28
COL21A1-211ENST00000488912 PDE8BO95263 885 aa13.33□□□□□ -0.28
COL21A1-211ENST00000488912 MFAP1P55081 439 aaKnown RBP13.33□□□□□ -0.28
COL21A1-211ENST00000488912 ST5P78524 1137 aa13.33□□□□□ -0.28
COL21A1-211ENST00000488912 MSL1Q68DK7 614 aa13.33□□□□□ -0.28
COL21A1-211ENST00000488912 ANKRD18AQ8IVF6 992 aa13.33□□□□□ -0.28
COL21A1-211ENST00000488912 HELBQ8NG08 1087 aaPredicted RBP13.33□□□□□ -0.28
COL21A1-211ENST00000488912 CELF1Q92879 486 aaKnown RBP13.33□□□□□ -0.28
COL21A1-211ENST00000488912 BOLA2Q9H3K6 86 aa13.33□□□□□ -0.28
COL21A1-211ENST00000488912 ADORA1P30542 326 aa13.32□□□□□ -0.28
COL21A1-211ENST00000488912 ATP2B3Q16720 1220 aa13.32□□□□□ -0.28
COL21A1-211ENST00000488912 ATP5JP18859 108 aa13.31□□□□□ -0.28
COL21A1-211ENST00000488912 CNTROBQ8N137 903 aa13.31□□□□□ -0.28
COL21A1-211ENST00000488912 MMP10P09238 476 aa13.31□□□□□ -0.28
COL21A1-211ENST00000488912 XAGE2Q96GT9 111 aa13.31□□□□□ -0.28
COL21A1-211ENST00000488912 TAF5LO75529 589 aa13.3□□□□□ -0.28
COL21A1-211ENST00000488912 CASC1Q6TDU7 716 aa13.3□□□□□ -0.28
COL21A1-211ENST00000488912 CCDC125Q86Z20 511 aa13.3□□□□□ -0.28
COL21A1-211ENST00000488912 BSDC1Q9NW68 430 aaPredicted RBP13.3□□□□□ -0.28
COL21A1-211ENST00000488912 CHRNDQ07001 517 aa13.3□□□□□ -0.28
COL21A1-211ENST00000488912 PUM3Q15397 648 aaKnown RBP13.3□□□□□ -0.28
COL21A1-211ENST00000488912 CRY2Q49AN0 593 aa13.3□□□□□ -0.28
COL21A1-211ENST00000488912 DDX46Q7L014 1031 aaKnown RBP13.3□□□□□ -0.28
COL21A1-211ENST00000488912 UPF2Q9HAU5 1272 aaKnown RBP13.3□□□□□ -0.28
COL21A1-211ENST00000488912 NDUFB9Q9Y6M9 179 aa13.3□□□□□ -0.28
COL21A1-211ENST00000488912 SNAP23O00161 211 aa13.29□□□□□ -0.28
COL21A1-211ENST00000488912 CHMLP26374 656 aa13.29□□□□□ -0.28
COL21A1-211ENST00000488912 RPS8P62241 208 aaKnown RBP13.29□□□□□ -0.28
COL21A1-211ENST00000488912 PDGFDQ9GZP0 370 aaPredicted RBP13.29□□□□□ -0.28
COL21A1-211ENST00000488912 AKAP11Q9UKA4 1901 aa13.29□□□□□ -0.28
COL21A1-211ENST00000488912 FGFR2P21802 821 aa13.29□□□□□ -0.28
COL21A1-211ENST00000488912 EVI5LQ96CN4 794 aa13.29□□□□□ -0.28
COL21A1-211ENST00000488912 EDC3Q96F86 508 aaKnown RBP13.29□□□□□ -0.28
COL21A1-211ENST00000488912 COL11A2P13942 1736 aaPredicted RBP13.28□□□□□ -0.28
COL21A1-211ENST00000488912 GORABQ5T7V8 394 aa13.28□□□□□ -0.28
COL21A1-211ENST00000488912 LPIN2Q92539 896 aa13.28□□□□□ -0.28
COL21A1-211ENST00000488912 RPGRQ92834 1020 aaKnown RBP13.28□□□□□ -0.28
COL21A1-211ENST00000488912 HAUS7Q99871 368 aa13.28□□□□□ -0.28
COL21A1-211ENST00000488912 MINPP1Q9UNW1 487 aa13.28□□□□□ -0.28
COL21A1-211ENST00000488912 PARP3Q9Y6F1 533 aa13.28□□□□□ -0.28
COL21A1-211ENST00000488912 CCDC158Q5M9N0 1113 aa13.28□□□□□ -0.28
COL21A1-211ENST00000488912 TBC1D32Q96NH3 1257 aa13.28□□□□□ -0.28
COL21A1-211ENST00000488912 DNAJC2Q99543 621 aaKnown RBP13.28□□□□□ -0.28
COL21A1-211ENST00000488912 GRAPQ13588 217 aa13.27□□□□□ -0.28
COL21A1-211ENST00000488912 TTC39AQ5SRH9 613 aa13.27□□□□□ -0.28
COL21A1-211ENST00000488912 GRAPLQ8TC17 118 aaPredicted RBP13.27□□□□□ -0.28
COL21A1-211ENST00000488912 KLRG2A4D1S0 409 aaPredicted RBP13.27□□□□□ -0.29
COL21A1-211ENST00000488912 SLC5A1P13866 664 aa13.27□□□□□ -0.29
COL21A1-211ENST00000488912 ESYT1Q9BSJ8 1104 aa13.27□□□□□ -0.29
COL21A1-211ENST00000488912 IFIT1P09914 478 aaKnown RBP13.26□□□□□ -0.29
COL21A1-211ENST00000488912 SCARF1Q14162 830 aa13.26□□□□□ -0.29
COL21A1-211ENST00000488912 SLC51AQ86UW1 340 aa13.26□□□□□ -0.29
COL21A1-211ENST00000488912 BRIP1Q9BX63 1249 aa13.26□□□□□ -0.29
COL21A1-211ENST00000488912 IL25Q9H293 177 aa13.26□□□□□ -0.29
COL21A1-211ENST00000488912 WTIPA6NIX2 430 aaPredicted RBP13.25□□□□□ -0.29
COL21A1-211ENST00000488912 ANP32AP39687 249 aaKnown RBP13.25□□□□□ -0.29
COL21A1-211ENST00000488912 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.25□□□□□ -0.29
COL21A1-211ENST00000488912 FSD1Q9BTV5 496 aa13.25□□□□□ -0.29
COL21A1-211ENST00000488912 C22orf23Q9BZE7 217 aa13.25□□□□□ -0.29
COL21A1-211ENST00000488912 CACNA1SQ13698 1873 aa13.25□□□□□ -0.29
COL21A1-211ENST00000488912 MYO5AQ9Y4I1 1855 aaKnown RBP13.25□□□□□ -0.29
COL21A1-211ENST00000488912 PHKA1P46020 1223 aa13.25□□□□□ -0.29
COL21A1-211ENST00000488912 CCDC102BQ68D86 513 aa13.25□□□□□ -0.29
COL21A1-211ENST00000488912 RBM17Q96I25 401 aaKnown RBP13.25□□□□□ -0.29
COL21A1-211ENST00000488912 PAG1Q9NWQ8 432 aa13.25□□□□□ -0.29
COL21A1-211ENST00000488912 GOLIM4O00461 696 aa13.24□□□□□ -0.29
COL21A1-211ENST00000488912 HOXA10P31260 410 aaPredicted RBP13.24□□□□□ -0.29
COL21A1-211ENST00000488912 CWC27Q6UX04 472 aaKnown RBP13.24□□□□□ -0.29
COL21A1-211ENST00000488912 PI16Q6UXB8 463 aa13.24□□□□□ -0.29
COL21A1-211ENST00000488912 DIAPH3Q9NSV4 1193 aa13.24□□□□□ -0.29
COL21A1-211ENST00000488912 MYH7P12883 1935 aa13.24□□□□□ -0.29
COL21A1-211ENST00000488912 MCAMP43121 646 aa13.24□□□□□ -0.29
COL21A1-211ENST00000488912 SNRKQ9NRH2 765 aa13.24□□□□□ -0.29
COL21A1-211ENST00000488912 LRRC37AA6NMS7 1700 aa13.23□□□□□ -0.29
COL21A1-211ENST00000488912 EIF5BO60841 1220 aaKnown RBP13.23□□□□□ -0.29
COL21A1-211ENST00000488912 REC8O95072 547 aa13.23□□□□□ -0.29
COL21A1-211ENST00000488912 ARID4AP29374 1257 aaPredicted RBP13.23□□□□□ -0.29
COL21A1-211ENST00000488912 FKBP4Q02790 459 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL21A1-211ENST00000488912 UBE4AQ14139 1066 aa13.23□□□□□ -0.29
COL21A1-211ENST00000488912 ZNF512BQ96KM6 892 aaPredicted RBP13.23□□□□□ -0.29
COL21A1-211ENST00000488912 ANTXR1Q9H6X2 564 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms