RNA–Protein interactions for RNA: ENST00000488865.2

RNF220-216, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-216ENST00000488865 CDC37L1Q7L3B6 337 aa33.43■■■□□ 2.94
RNF220-216ENST00000488865 ZC3H12CQ9C0D7 883 aaKnown RBP33.43■■■□□ 2.94
RNF220-216ENST00000488865 THSD7BQ9C0I4 1608 aa33.42■■■□□ 2.94
RNF220-216ENST00000488865 CELF2O95319 508 aaKnown RBP33.42■■■□□ 2.94
RNF220-216ENST00000488865 DOK7Q18PE1 504 aa33.42■■■□□ 2.94
RNF220-216ENST00000488865 NCBP3Q53F19 620 aaKnown RBP33.42■■■□□ 2.94
RNF220-216ENST00000488865 PAXIP1Q6ZW49 1069 aaPredicted RBP33.42■■■□□ 2.94
RNF220-216ENST00000488865 STK31Q9BXU1 1019 aa33.42■■■□□ 2.94
RNF220-216ENST00000488865 ANKIB1Q9P2G1 1089 aa33.42■■■□□ 2.94
RNF220-216ENST00000488865 JARID2Q92833 1246 aaPredicted RBP33.41■■■□□ 2.94
RNF220-216ENST00000488865 IL16Q14005 1332 aa33.4■■■□□ 2.94
RNF220-216ENST00000488865 PI4KAP2A4QPH2 592 aa33.4■■■□□ 2.94
RNF220-216ENST00000488865 CYP4F22Q6NT55 531 aa33.4■■■□□ 2.94
RNF220-216ENST00000488865 SAPCD2Q86UD0 394 aa33.4■■■□□ 2.94
RNF220-216ENST00000488865 PI4KAP1Q8N8J0 262 aa33.4■■■□□ 2.94
RNF220-216ENST00000488865 GPR101Q96P66 508 aaPredicted RBP33.4■■■□□ 2.94
RNF220-216ENST00000488865 GGA1Q9UJY5 639 aa33.4■■■□□ 2.94
RNF220-216ENST00000488865 RTL9Q8NET4 1388 aa33.39■■■□□ 2.94
RNF220-216ENST00000488865 UFL1O94874 794 aa33.39■■■□□ 2.94
RNF220-216ENST00000488865 IGKV5-2P06315 115 aa33.39■■■□□ 2.94
RNF220-216ENST00000488865 LBX1P52954 281 aa33.39■■■□□ 2.94
RNF220-216ENST00000488865 HHIPL1Q96JK4 782 aa33.39■■■□□ 2.94
RNF220-216ENST00000488865 KCNQ5Q9NR82 932 aa33.39■■■□□ 2.94
RNF220-216ENST00000488865 NEXNQ0ZGT2 675 aa33.38■■■□□ 2.93
RNF220-216ENST00000488865 TWISTNBQ3B726 338 aaPredicted RBP33.38■■■□□ 2.93
RNF220-216ENST00000488865 SAMD7Q7Z3H4 446 aa33.38■■■□□ 2.93
RNF220-216ENST00000488865 ANKRD18AQ8IVF6 992 aa33.38■■■□□ 2.93
RNF220-216ENST00000488865 HSPA8P11142 646 aaKnown RBP33.37■■■□□ 2.93
RNF220-216ENST00000488865 CCDC85AQ96PX6 553 aaPredicted RBP33.37■■■□□ 2.93
RNF220-216ENST00000488865 CTSWP56202 376 aa33.36■■■□□ 2.93
RNF220-216ENST00000488865 G3V3G9 751 aa33.35■■■□□ 2.93
RNF220-216ENST00000488865 VIL1P09327 827 aaKnown RBP33.35■■■□□ 2.93
RNF220-216ENST00000488865 MAP2K2P36507 400 aa33.35■■■□□ 2.93
RNF220-216ENST00000488865 GRM1Q13255 1194 aa33.35■■■□□ 2.93
RNF220-216ENST00000488865 DCAF8Q5TAQ9 597 aa33.35■■■□□ 2.93
RNF220-216ENST00000488865 CDC5LQ99459 802 aaKnown RBP33.35■■■□□ 2.93
RNF220-216ENST00000488865 XDHP47989 1333 aa33.34■■■□□ 2.93
RNF220-216ENST00000488865 TBC1D10BQ4KMP7 808 aaPredicted RBP33.34■■■□□ 2.93
RNF220-216ENST00000488865 USP48Q86UV5 1035 aa33.34■■■□□ 2.93
RNF220-216ENST00000488865 SCN9AQ15858 1988 aa33.34■■■□□ 2.93
RNF220-216ENST00000488865 SLC4A2P04920 1241 aa33.33■■■□□ 2.93
RNF220-216ENST00000488865 BEGAINQ9BUH8 593 aa33.33■■■□□ 2.93
RNF220-216ENST00000488865 ZNF408Q9H9D4 720 aa33.33■■■□□ 2.93
RNF220-216ENST00000488865 NEURL1BA8MQ27 555 aa33.32■■■□□ 2.92
RNF220-216ENST00000488865 TTLL11Q8NHH1 800 aa33.32■■■□□ 2.92
RNF220-216ENST00000488865 MRS2Q9HD23 443 aa33.32■■■□□ 2.92
RNF220-216ENST00000488865 EGFRP00533 1210 aa33.31■■■□□ 2.92
RNF220-216ENST00000488865 ATP2B4P23634 1241 aa33.31■■■□□ 2.92
RNF220-216ENST00000488865 ZEB1P37275 1124 aaPredicted RBP33.31■■■□□ 2.92
RNF220-216ENST00000488865 G2E3Q7L622 706 aa33.31■■■□□ 2.92
RNF220-216ENST00000488865 ZNF609O15014 1411 aa33.3■■■□□ 2.92
RNF220-216ENST00000488865 CWF19L2Q2TBE0 894 aaKnown RBP33.3■■■□□ 2.92
RNF220-216ENST00000488865 MYH3P11055 1940 aa33.3■■■□□ 2.92
RNF220-216ENST00000488865 AOC2O75106 756 aa33.29■■■□□ 2.92
RNF220-216ENST00000488865 RBM26Q5T8P6 1007 aaKnown RBP33.29■■■□□ 2.92
RNF220-216ENST00000488865 KRT26Q7Z3Y9 468 aa33.29■■■□□ 2.92
RNF220-216ENST00000488865 DCPSQ96C86 337 aaKnown RBP33.29■■■□□ 2.92
RNF220-216ENST00000488865 BSDC1Q9NW68 430 aaPredicted RBP33.29■■■□□ 2.92
RNF220-216ENST00000488865 H7C1W4 665 aa33.28■■■□□ 2.92
RNF220-216ENST00000488865 KIF4BQ2VIQ3 1234 aa33.28■■■□□ 2.92
RNF220-216ENST00000488865 AGBL3Q8NEM8 1001 aa33.28■■■□□ 2.92
RNF220-216ENST00000488865 GREM2Q9H772 168 aa33.28■■■□□ 2.92
RNF220-216ENST00000488865 RSBN1LQ6PCB5 846 aaPredicted RBP33.27■■■□□ 2.92
RNF220-216ENST00000488865 ANP32CO43423 234 aa33.26■■■□□ 2.91
RNF220-216ENST00000488865 FLIIQ13045 1269 aa33.26■■■□□ 2.91
RNF220-216ENST00000488865 PODNQ7Z5L7 613 aa33.26■■■□□ 2.91
RNF220-216ENST00000488865 WDR63Q8IWG1 891 aa33.26■■■□□ 2.91
RNF220-216ENST00000488865 MINPP1Q9UNW1 487 aa33.26■■■□□ 2.91
RNF220-216ENST00000488865 FANCIQ9NVI1 1328 aa33.26■■■□□ 2.91
RNF220-216ENST00000488865 PSME4Q14997 1843 aa33.25■■■□□ 2.91
RNF220-216ENST00000488865 POLR2AP24928 1970 aaKnown RBP33.25■■■□□ 2.91
RNF220-216ENST00000488865 ZNF280AP59817 542 aaPredicted RBP33.25■■■□□ 2.91
RNF220-216ENST00000488865 UBE3BQ7Z3V4 1068 aa33.25■■■□□ 2.91
RNF220-216ENST00000488865 CACNA1FO60840 1977 aa33.24■■■□□ 2.91
RNF220-216ENST00000488865 GCKRQ14397 625 aa33.24■■■□□ 2.91
RNF220-216ENST00000488865 PLA2G12BQ9BX93 195 aa33.24■■■□□ 2.91
RNF220-216ENST00000488865 HUNKP57058 714 aa33.23■■■□□ 2.91
RNF220-216ENST00000488865 DLK2Q6UY11 383 aa33.23■■■□□ 2.91
RNF220-216ENST00000488865 MED23Q9ULK4 1368 aa33.22■■■□□ 2.91
RNF220-216ENST00000488865 USP17L3A6NCW0 530 aa33.22■■■□□ 2.91
RNF220-216ENST00000488865 USP17L4A6NCW7 530 aa33.22■■■□□ 2.91
RNF220-216ENST00000488865 CA12O43570 354 aa33.22■■■□□ 2.91
RNF220-216ENST00000488865 BRPF1P55201 1214 aaPredicted RBP33.22■■■□□ 2.91
RNF220-216ENST00000488865 USP17L1Q7RTZ2 530 aa33.22■■■□□ 2.91
RNF220-216ENST00000488865 ADM5C9JUS6 153 aa33.21■■■□□ 2.91
RNF220-216ENST00000488865 VAMP4O75379 141 aa33.21■■■□□ 2.91
RNF220-216ENST00000488865 FKBP5Q13451 457 aaPredicted RBP33.21■■■□□ 2.91
RNF220-216ENST00000488865 SULF1Q8IWU6 871 aa33.21■■■□□ 2.91
RNF220-216ENST00000488865 DNAAF4Q8WXU2 420 aa33.21■■■□□ 2.91
RNF220-216ENST00000488865 GMLQ99445 158 aa33.21■■■□□ 2.91
RNF220-216ENST00000488865 MYH16Q9H6N6 1097 aa33.21■■■□□ 2.91
RNF220-216ENST00000488865 GBA2Q9HCG7 927 aaPredicted RBP33.21■■■□□ 2.91
RNF220-216ENST00000488865 NOGQ13253 232 aa33.2■■■□□ 2.91
RNF220-216ENST00000488865 C2orf69Q8N8R5 385 aa33.2■■■□□ 2.91
RNF220-216ENST00000488865 GGA3Q9NZ52 723 aa33.2■■■□□ 2.91
RNF220-216ENST00000488865 SPEF2Q9C093 1822 aa33.19■■■□□ 2.9
RNF220-216ENST00000488865 ZNF316A6NFI3 1004 aaPredicted RBP33.19■■■□□ 2.9
RNF220-216ENST00000488865 IGHMBP2P38935 993 aaKnown RBP33.19■■■□□ 2.9
RNF220-216ENST00000488865 CCT4P50991 539 aaKnown RBP33.19■■■□□ 2.9
RNF220-216ENST00000488865 CASP7P55210 303 aa33.19■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms