RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 RPAP2Q8IXW5 612 aaPredicted RBP21.28■■□□□ 1
CDK5RAP1-214ENST00000488723 COPRSQ9NQ92 184 aa21.28■■□□□ 1
CDK5RAP1-214ENST00000488723 XDHP47989 1333 aa21.28■■□□□ 1
CDK5RAP1-214ENST00000488723 CHD4Q14839 1912 aa21.27■■□□□ 1
CDK5RAP1-214ENST00000488723 SRGAP3O43295 1099 aa21.27■■□□□ 1
CDK5RAP1-214ENST00000488723 LMNB1P20700 586 aa21.27■■□□□ 1
CDK5RAP1-214ENST00000488723 PTPN12Q05209 780 aaKnown RBP21.27■■□□□ 1
CDK5RAP1-214ENST00000488723 NSFL1CQ9UNZ2 370 aaKnown RBP21.27■■□□□ 1
CDK5RAP1-214ENST00000488723 COL4A1P02462 1669 aa21.26■□□□□ 0.99
CDK5RAP1-214ENST00000488723 CIAO1O76071 339 aa21.26■□□□□ 0.99
CDK5RAP1-214ENST00000488723 SSH3Q8TE77 659 aa21.26■□□□□ 0.99
CDK5RAP1-214ENST00000488723 ZNF594Q96JF6 807 aaPredicted RBP21.26■□□□□ 0.99
CDK5RAP1-214ENST00000488723 CNNM1Q9NRU3 951 aa21.26■□□□□ 0.99
CDK5RAP1-214ENST00000488723 ANKIB1Q9P2G1 1089 aa21.26■□□□□ 0.99
CDK5RAP1-214ENST00000488723 LEMD3Q9Y2U8 911 aa21.26■□□□□ 0.99
CDK5RAP1-214ENST00000488723 RIPOR2Q9Y4F9 1068 aa21.26■□□□□ 0.99
CDK5RAP1-214ENST00000488723 SBF1O95248 1867 aa21.26■□□□□ 0.99
CDK5RAP1-214ENST00000488723 MROH5Q6ZUA9 1318 aa21.26■□□□□ 0.99
CDK5RAP1-214ENST00000488723 ATP2B4P23634 1241 aa21.25■□□□□ 0.99
CDK5RAP1-214ENST00000488723 GPSM2P81274 684 aa21.25■□□□□ 0.99
CDK5RAP1-214ENST00000488723 POLA2Q14181 598 aa21.25■□□□□ 0.99
CDK5RAP1-214ENST00000488723 EYA2O00167 538 aa21.24■□□□□ 0.99
CDK5RAP1-214ENST00000488723 CENPBP07199 599 aaPredicted RBP21.24■□□□□ 0.99
CDK5RAP1-214ENST00000488723 CHRNDQ07001 517 aa21.24■□□□□ 0.99
CDK5RAP1-214ENST00000488723 CEP85Q6P2H3 762 aa21.24■□□□□ 0.99
CDK5RAP1-214ENST00000488723 EYA3Q99504 573 aa21.24■□□□□ 0.99
CDK5RAP1-214ENST00000488723 GGA1Q9UJY5 639 aa21.24■□□□□ 0.99
CDK5RAP1-214ENST00000488723 ZC3H4Q9UPT8 1303 aaKnown RBP21.24■□□□□ 0.99
CDK5RAP1-214ENST00000488723 TBC1D16Q8TBP0 767 aa21.23■□□□□ 0.99
CDK5RAP1-214ENST00000488723 LTBP1Q14766 1721 aa21.22■□□□□ 0.99
CDK5RAP1-214ENST00000488723 PNMA6EA0A0J9YXQ4 647 aa21.22■□□□□ 0.99
CDK5RAP1-214ENST00000488723 HMMRO75330 724 aa21.22■□□□□ 0.99
CDK5RAP1-214ENST00000488723 IL15P40933 162 aaPredicted RBP21.22■□□□□ 0.99
CDK5RAP1-214ENST00000488723 IARSP41252 1262 aaKnown RBP21.22■□□□□ 0.99
CDK5RAP1-214ENST00000488723 RASSF7Q02833 373 aa21.22■□□□□ 0.99
CDK5RAP1-214ENST00000488723 C1orf115Q9H7X2 142 aa21.22■□□□□ 0.99
CDK5RAP1-214ENST00000488723 POLLQ9UGP5 575 aa21.22■□□□□ 0.99
CDK5RAP1-214ENST00000488723 SPEF2Q9C093 1822 aa21.21■□□□□ 0.99
CDK5RAP1-214ENST00000488723 KIAA2012Q0VF49 1180 aa21.21■□□□□ 0.99
CDK5RAP1-214ENST00000488723 PUS3Q9BZE2 481 aaKnown RBP21.21■□□□□ 0.99
CDK5RAP1-214ENST00000488723 DICER1Q9UPY3 1922 aaKnown RBP21.21■□□□□ 0.99
CDK5RAP1-214ENST00000488723 CCDC88AQ3V6T2 1871 aa21.2■□□□□ 0.98
CDK5RAP1-214ENST00000488723 C6orf229H3BNL8 230 aa21.2■□□□□ 0.98
CDK5RAP1-214ENST00000488723 UBE4AQ14139 1066 aa21.2■□□□□ 0.98
CDK5RAP1-214ENST00000488723 WASHC4Q2M389 1173 aa21.2■□□□□ 0.98
CDK5RAP1-214ENST00000488723 LRRC24Q50LG9 513 aa21.2■□□□□ 0.98
CDK5RAP1-214ENST00000488723 C9orf131Q5VYM1 1079 aa21.2■□□□□ 0.98
CDK5RAP1-214ENST00000488723 C15orf52Q6ZUT6 534 aaKnown RBP21.2■□□□□ 0.98
CDK5RAP1-214ENST00000488723 ATG9AQ7Z3C6 839 aa21.2■□□□□ 0.98
CDK5RAP1-214ENST00000488723 KLHDC4Q8TBB5 520 aa21.2■□□□□ 0.98
CDK5RAP1-214ENST00000488723 CRBNQ96SW2 442 aa21.2■□□□□ 0.98
CDK5RAP1-214ENST00000488723 ZNF277Q9NRM2 450 aaPredicted RBP21.2■□□□□ 0.98
CDK5RAP1-214ENST00000488723 NOP58Q9Y2X3 529 aaKnown RBP21.2■□□□□ 0.98
CDK5RAP1-214ENST00000488723 UFL1O94874 794 aa21.19■□□□□ 0.98
CDK5RAP1-214ENST00000488723 PRELPP51888 382 aa21.19■□□□□ 0.98
CDK5RAP1-214ENST00000488723 JDP2Q8WYK2 163 aa21.19■□□□□ 0.98
CDK5RAP1-214ENST00000488723 ZC3H12CQ9C0D7 883 aaKnown RBP21.19■□□□□ 0.98
CDK5RAP1-214ENST00000488723 RNF181Q9P0P0 153 aa21.19■□□□□ 0.98
CDK5RAP1-214ENST00000488723 ZNF804BA4D1E1 1349 aa21.19■□□□□ 0.98
CDK5RAP1-214ENST00000488723 PDE8BO95263 885 aa21.18■□□□□ 0.98
CDK5RAP1-214ENST00000488723 METTL24Q5JXM2 366 aa21.18■□□□□ 0.98
CDK5RAP1-214ENST00000488723 SLC51AQ86UW1 340 aa21.18■□□□□ 0.98
CDK5RAP1-214ENST00000488723 VGLL2Q8N8G2 317 aa21.18■□□□□ 0.98
CDK5RAP1-214ENST00000488723 DUOX1Q9NRD9 1551 aa21.18■□□□□ 0.98
CDK5RAP1-214ENST00000488723 PPIP5K2O43314 1243 aa21.17■□□□□ 0.98
CDK5RAP1-214ENST00000488723 KCNJ4P48050 445 aa21.17■□□□□ 0.98
CDK5RAP1-214ENST00000488723 G3BP1Q13283 466 aaKnown RBP eCLIP21.17■□□□□ 0.98
CDK5RAP1-214ENST00000488723 HSP90AB4PQ58FF6 505 aa21.17■□□□□ 0.98
CDK5RAP1-214ENST00000488723 LARGE2Q8N3Y3 721 aa21.17■□□□□ 0.98
CDK5RAP1-214ENST00000488723 CEP126Q9P2H0 1117 aa21.17■□□□□ 0.98
CDK5RAP1-214ENST00000488723 PA2G4Q9UQ80 394 aaKnown RBP21.17■□□□□ 0.98
CDK5RAP1-214ENST00000488723 MED23Q9ULK4 1368 aa21.17■□□□□ 0.98
CDK5RAP1-214ENST00000488723 TAF5LO75529 589 aa21.16■□□□□ 0.98
CDK5RAP1-214ENST00000488723 SIRT2Q8IXJ6 389 aa21.16■□□□□ 0.98
CDK5RAP1-214ENST00000488723 FZD9O00144 591 aa21.15■□□□□ 0.98
CDK5RAP1-214ENST00000488723 AOC3Q16853 763 aa21.15■□□□□ 0.98
CDK5RAP1-214ENST00000488723 HELBQ8NG08 1087 aaPredicted RBP21.15■□□□□ 0.98
CDK5RAP1-214ENST00000488723 SIL1Q9H173 461 aa21.15■□□□□ 0.98
CDK5RAP1-214ENST00000488723 SURF6O75683 361 aaKnown RBP21.14■□□□□ 0.97
CDK5RAP1-214ENST00000488723 PUM3Q15397 648 aaKnown RBP21.14■□□□□ 0.97
CDK5RAP1-214ENST00000488723 NIM1KQ8IY84 436 aa21.14■□□□□ 0.97
CDK5RAP1-214ENST00000488723 ZNRF3Q9ULT6 936 aa21.14■□□□□ 0.97
CDK5RAP1-214ENST00000488723 AKAP2Q9Y2D5 859 aa21.14■□□□□ 0.97
CDK5RAP1-214ENST00000488723 A0A1B0GUL6 1792 aa21.13■□□□□ 0.97
CDK5RAP1-214ENST00000488723 PODNQ7Z5L7 613 aa21.13■□□□□ 0.97
CDK5RAP1-214ENST00000488723 ERC1Q8IUD2 1116 aa21.13■□□□□ 0.97
CDK5RAP1-214ENST00000488723 LPIN2Q92539 896 aa21.13■□□□□ 0.97
CDK5RAP1-214ENST00000488723 COA1Q9GZY4 146 aa21.13■□□□□ 0.97
CDK5RAP1-214ENST00000488723 IRS2Q9Y4H2 1338 aa21.12■□□□□ 0.97
CDK5RAP1-214ENST00000488723 FGFR2P21802 821 aa21.12■□□□□ 0.97
CDK5RAP1-214ENST00000488723 GPR108Q9NPR9 543 aa21.12■□□□□ 0.97
CDK5RAP1-214ENST00000488723 RIMBP2O15034 1052 aa21.11■□□□□ 0.97
CDK5RAP1-214ENST00000488723 IFIT1P09914 478 aaKnown RBP21.11■□□□□ 0.97
CDK5RAP1-214ENST00000488723 DPY19L2Q6NUT2 758 aa21.11■□□□□ 0.97
CDK5RAP1-214ENST00000488723 EXOC6Q8TAG9 804 aa21.11■□□□□ 0.97
CDK5RAP1-214ENST00000488723 PCDHB15Q9Y5E8 787 aa21.11■□□□□ 0.97
CDK5RAP1-214ENST00000488723 WTIPA6NIX2 430 aaPredicted RBP21.1■□□□□ 0.97
CDK5RAP1-214ENST00000488723 G3V3G9 751 aa21.1■□□□□ 0.97
CDK5RAP1-214ENST00000488723 RAB11FIP3O75154 756 aa21.1■□□□□ 0.97
CDK5RAP1-214ENST00000488723 DCAF8Q5TAQ9 597 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms