RNA–Protein interactions for RNA: ENST00000488631.1

PDPN-206, Transcript of podoplanin, humanhuman

TSL 3

Gene PDPN, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-206ENST00000488631 CLUAP1Q96AJ1 413 aa12.37□□□□□ -0.43
PDPN-206ENST00000488631 PSMD1Q99460 953 aa12.37□□□□□ -0.43
PDPN-206ENST00000488631 EYA3Q99504 573 aa12.37□□□□□ -0.43
PDPN-206ENST00000488631 CREBZFQ9NS37 354 aa12.37□□□□□ -0.43
PDPN-206ENST00000488631 ANKRD36CQ5JPF3 1778 aa12.36□□□□□ -0.43
PDPN-206ENST00000488631 C19orf67A6NJJ6 358 aa12.36□□□□□ -0.43
PDPN-206ENST00000488631 UFL1O94874 794 aa12.36□□□□□ -0.43
PDPN-206ENST00000488631 GPSM2P81274 684 aa12.36□□□□□ -0.43
PDPN-206ENST00000488631 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
PDPN-206ENST00000488631 ZC3H12CQ9C0D7 883 aaKnown RBP12.36□□□□□ -0.43
PDPN-206ENST00000488631 NMRK2Q9NPI5 230 aa12.36□□□□□ -0.43
PDPN-206ENST00000488631 CNNM1Q9NRU3 951 aa12.36□□□□□ -0.43
PDPN-206ENST00000488631 GGA1Q9UJY5 639 aa12.36□□□□□ -0.43
PDPN-206ENST00000488631 HDAC5Q9UQL6 1122 aa12.36□□□□□ -0.43
PDPN-206ENST00000488631 SLX4Q8IY92 1834 aa12.36□□□□□ -0.43
PDPN-206ENST00000488631 PLIN1O60240 522 aa12.35□□□□□ -0.43
PDPN-206ENST00000488631 NBPF7P0C2Y1 421 aaPredicted RBP12.35□□□□□ -0.43
PDPN-206ENST00000488631 UBTFL1P0CB47 393 aaPredicted RBP12.35□□□□□ -0.43
PDPN-206ENST00000488631 PRELPP51888 382 aa12.35□□□□□ -0.43
PDPN-206ENST00000488631 ZKSCAN2Q63HK3 967 aa12.35□□□□□ -0.43
PDPN-206ENST00000488631 ZC3H4Q9UPT8 1303 aaKnown RBP12.35□□□□□ -0.43
PDPN-206ENST00000488631 DLEC1Q9Y238 1755 aa12.34□□□□□ -0.43
PDPN-206ENST00000488631 GLTPD2A6NH11 291 aa12.34□□□□□ -0.43
PDPN-206ENST00000488631 DDNO94850 711 aaPredicted RBP12.34□□□□□ -0.43
PDPN-206ENST00000488631 FBXW7Q969H0 707 aa12.34□□□□□ -0.43
PDPN-206ENST00000488631 SUCLG2Q96I99 432 aa12.34□□□□□ -0.43
PDPN-206ENST00000488631 GPR101Q96P66 508 aaPredicted RBP12.34□□□□□ -0.43
PDPN-206ENST00000488631 PLA2G12BQ9BX93 195 aa12.34□□□□□ -0.43
PDPN-206ENST00000488631 ARFGEF1Q9Y6D6 1849 aa12.34□□□□□ -0.43
PDPN-206ENST00000488631 VEGFAP15692 232 aaPredicted RBP12.33□□□□□ -0.44
PDPN-206ENST00000488631 LMOD1P29536 600 aaPredicted RBP12.33□□□□□ -0.44
PDPN-206ENST00000488631 CASP7P55210 303 aa12.33□□□□□ -0.44
PDPN-206ENST00000488631 DOK7Q18PE1 504 aa12.33□□□□□ -0.44
PDPN-206ENST00000488631 ATF7IPQ6VMQ6 1270 aa12.33□□□□□ -0.44
PDPN-206ENST00000488631 ANKRD2Q9GZV1 360 aa12.33□□□□□ -0.44
PDPN-206ENST00000488631 BSDC1Q9NW68 430 aaPredicted RBP12.33□□□□□ -0.44
PDPN-206ENST00000488631 BRCA1P38398 1863 aaKnown RBP12.33□□□□□ -0.44
PDPN-206ENST00000488631 XDHP47989 1333 aa12.33□□□□□ -0.44
PDPN-206ENST00000488631 CACNA1SQ13698 1873 aa12.32□□□□□ -0.44
PDPN-206ENST00000488631 CSF1RP07333 972 aa12.32□□□□□ -0.44
PDPN-206ENST00000488631 ATP2B4P23634 1241 aa12.32□□□□□ -0.44
PDPN-206ENST00000488631 FOXO4P98177 505 aa12.32□□□□□ -0.44
PDPN-206ENST00000488631 EAPPQ56P03 285 aaPredicted RBP12.32□□□□□ -0.44
PDPN-206ENST00000488631 EPHA10Q5JZY3 1008 aa12.32□□□□□ -0.44
PDPN-206ENST00000488631 LDHAL6AQ6ZMR3 332 aa12.32□□□□□ -0.44
PDPN-206ENST00000488631 TBC1D16Q8TBP0 767 aa12.32□□□□□ -0.44
PDPN-206ENST00000488631 ARHGAP45Q92619 1136 aa12.32□□□□□ -0.44
PDPN-206ENST00000488631 ZNF594Q96JF6 807 aaPredicted RBP12.32□□□□□ -0.44
PDPN-206ENST00000488631 VPS33BQ9H267 617 aa12.32□□□□□ -0.44
PDPN-206ENST00000488631 BICC1Q9H694 974 aaKnown RBP12.32□□□□□ -0.44
PDPN-206ENST00000488631 DBNDD1Q9H9R9 158 aa12.32□□□□□ -0.44
PDPN-206ENST00000488631 ZNRF3Q9ULT6 936 aa12.32□□□□□ -0.44
PDPN-206ENST00000488631 ZNF541Q9H0D2 1346 aa12.32□□□□□ -0.44
PDPN-206ENST00000488631 IQCA1LA6NCM1 817 aa12.31□□□□□ -0.44
PDPN-206ENST00000488631 RAD17O75943 681 aa12.31□□□□□ -0.44
PDPN-206ENST00000488631 TRIM27P14373 513 aa12.31□□□□□ -0.44
PDPN-206ENST00000488631 BRPF1P55201 1214 aaPredicted RBP12.31□□□□□ -0.44
PDPN-206ENST00000488631 KIAA2012Q0VF49 1180 aa12.31□□□□□ -0.44
PDPN-206ENST00000488631 TNIP1Q15025 636 aa12.31□□□□□ -0.44
PDPN-206ENST00000488631 ITPRIPQ8IWB1 547 aa12.31□□□□□ -0.44
PDPN-206ENST00000488631 HELBQ8NG08 1087 aaPredicted RBP12.31□□□□□ -0.44
PDPN-206ENST00000488631 USP44Q9H0E7 712 aa12.31□□□□□ -0.44
PDPN-206ENST00000488631 POLLQ9UGP5 575 aa12.31□□□□□ -0.44
PDPN-206ENST00000488631 MINPP1Q9UNW1 487 aa12.31□□□□□ -0.44
PDPN-206ENST00000488631 GNAI3P08754 354 aa12.3□□□□□ -0.44
PDPN-206ENST00000488631 CIAPIN1Q6FI81 312 aa12.3□□□□□ -0.44
PDPN-206ENST00000488631 DZIP1LQ8IYY4 767 aaKnown RBP12.3□□□□□ -0.44
PDPN-206ENST00000488631 RTFDC1Q9BY42 306 aaPredicted RBP12.3□□□□□ -0.44
PDPN-206ENST00000488631 RCAN3Q9UKA8 241 aa12.3□□□□□ -0.44
PDPN-206ENST00000488631 GOLGB1Q14789 3259 aaKnown RBP12.3□□□□□ -0.44
PDPN-206ENST00000488631 RTL9Q8NET4 1388 aa12.3□□□□□ -0.44
PDPN-206ENST00000488631 FZD9O00144 591 aa12.29□□□□□ -0.44
PDPN-206ENST00000488631 ECE2O60344 883 aa12.29□□□□□ -0.44
PDPN-206ENST00000488631 TAF5LO75529 589 aa12.29□□□□□ -0.44
PDPN-206ENST00000488631 MS4A1P11836 297 aa12.29□□□□□ -0.44
PDPN-206ENST00000488631 CHRNDQ07001 517 aa12.29□□□□□ -0.44
PDPN-206ENST00000488631 IFFO2Q5TF58 517 aa12.29□□□□□ -0.44
PDPN-206ENST00000488631 GPC2Q8N158 579 aa12.29□□□□□ -0.44
PDPN-206ENST00000488631 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.29□□□□□ -0.44
PDPN-206ENST00000488631 HACL1Q9UJ83 578 aa12.29□□□□□ -0.44
PDPN-206ENST00000488631 LRRFIP2Q9Y608 721 aaKnown RBP12.29□□□□□ -0.44
PDPN-206ENST00000488631 KIF3CO14782 793 aa12.28□□□□□ -0.44
PDPN-206ENST00000488631 TOMM70O94826 608 aa12.28□□□□□ -0.44
PDPN-206ENST00000488631 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
PDPN-206ENST00000488631 METTL24Q5JXM2 366 aa12.28□□□□□ -0.44
PDPN-206ENST00000488631 TMEM57Q8N5G2 664 aa12.28□□□□□ -0.44
PDPN-206ENST00000488631 MEIS3Q99687 375 aa12.28□□□□□ -0.44
PDPN-206ENST00000488631 PODXL2Q9NZ53 605 aa12.28□□□□□ -0.44
PDPN-206ENST00000488631 TNNQ9UQP3 1299 aa12.28□□□□□ -0.44
PDPN-206ENST00000488631 LEMD3Q9Y2U8 911 aa12.28□□□□□ -0.44
PDPN-206ENST00000488631 ZNF804BA4D1E1 1349 aa12.28□□□□□ -0.44
PDPN-206ENST00000488631 DDX60Q8IY21 1712 aaKnown RBP12.28□□□□□ -0.44
PDPN-206ENST00000488631 GNAI2P04899 355 aa12.27□□□□□ -0.45
PDPN-206ENST00000488631 CXCL9Q07325 125 aa12.27□□□□□ -0.45
PDPN-206ENST00000488631 INTS3Q68E01 1043 aaKnown RBP12.27□□□□□ -0.45
PDPN-206ENST00000488631 VPS37DQ86XT2 251 aa12.27□□□□□ -0.45
PDPN-206ENST00000488631 SIL1Q9H173 461 aa12.27□□□□□ -0.45
PDPN-206ENST00000488631 UTYO14607 1347 aa12.27□□□□□ -0.45
PDPN-206ENST00000488631 CACNA1FO60840 1977 aa12.27□□□□□ -0.45
PDPN-206ENST00000488631 H7C1D1 291 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms