RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 ZNF408Q9H9D4 720 aa15.95■□□□□ 0.14
TTC3-221ENST00000488522 DBNDD1Q9H9R9 158 aa15.95■□□□□ 0.14
TTC3-221ENST00000488522 TSKSQ9UJT2 592 aa15.95■□□□□ 0.14
TTC3-221ENST00000488522 ATP5J2-PTCD1G3V325 749 aa15.94■□□□□ 0.14
TTC3-221ENST00000488522 IRS4O14654 1257 aaPredicted RBP15.94■□□□□ 0.14
TTC3-221ENST00000488522 VIL1P09327 827 aaKnown RBP15.94■□□□□ 0.14
TTC3-221ENST00000488522 RPS8P62241 208 aaKnown RBP15.94■□□□□ 0.14
TTC3-221ENST00000488522 DUSP27Q5VZP5 1158 aa15.94■□□□□ 0.14
TTC3-221ENST00000488522 KRT26Q7Z3Y9 468 aa15.94■□□□□ 0.14
TTC3-221ENST00000488522 ZBTB38Q8NAP3 1195 aaPredicted RBP15.94■□□□□ 0.14
TTC3-221ENST00000488522 MCOLN1Q9GZU1 580 aa15.94■□□□□ 0.14
TTC3-221ENST00000488522 SAGE1Q9NXZ1 904 aa15.94■□□□□ 0.14
TTC3-221ENST00000488522 HSP90B1P14625 803 aaKnown RBP15.93■□□□□ 0.14
TTC3-221ENST00000488522 NEUROD2Q15784 382 aa15.93■□□□□ 0.14
TTC3-221ENST00000488522 TBC1D10BQ4KMP7 808 aaPredicted RBP15.93■□□□□ 0.14
TTC3-221ENST00000488522 RGMBQ6NW40 437 aa15.93■□□□□ 0.14
TTC3-221ENST00000488522 ZIC5Q96T25 663 aa15.93■□□□□ 0.14
TTC3-221ENST00000488522 GBA2Q9HCG7 927 aaPredicted RBP15.93■□□□□ 0.14
TTC3-221ENST00000488522 MBIPQ9NS73 344 aa15.93■□□□□ 0.14
TTC3-221ENST00000488522 CCDC85CA6NKD9 419 aa15.92■□□□□ 0.14
TTC3-221ENST00000488522 C6orf229H3BNL8 230 aa15.92■□□□□ 0.14
TTC3-221ENST00000488522 MLLT1Q03111 559 aaPredicted RBP15.92■□□□□ 0.14
TTC3-221ENST00000488522 CCDC102AQ96A19 550 aa15.92■□□□□ 0.14
TTC3-221ENST00000488522 RIMBP2O15034 1052 aa15.91■□□□□ 0.14
TTC3-221ENST00000488522 ZNF280AP59817 542 aaPredicted RBP15.91■□□□□ 0.14
TTC3-221ENST00000488522 WDR43Q15061 677 aaKnown RBP eCLIP15.91■□□□□ 0.14
TTC3-221ENST00000488522 KIF4BQ2VIQ3 1234 aa15.91■□□□□ 0.14
TTC3-221ENST00000488522 DLK2Q6UY11 383 aa15.91■□□□□ 0.14
TTC3-221ENST00000488522 CCDC191Q8NCU4 936 aa15.91■□□□□ 0.14
TTC3-221ENST00000488522 DCPSQ96C86 337 aaKnown RBP15.91■□□□□ 0.14
TTC3-221ENST00000488522 RNF39Q9H2S5 420 aa15.91■□□□□ 0.14
TTC3-221ENST00000488522 KCNQ5Q9NR82 932 aa15.91■□□□□ 0.14
TTC3-221ENST00000488522 ADAMTS8Q9UP79 889 aa15.91■□□□□ 0.14
TTC3-221ENST00000488522 LAS1LQ9Y4W2 734 aaKnown RBP15.91■□□□□ 0.14
TTC3-221ENST00000488522 ZNF646O15015 1829 aaPredicted RBP15.91■□□□□ 0.14
TTC3-221ENST00000488522 TNRC18O15417 2968 aaPredicted RBP15.9■□□□□ 0.14
TTC3-221ENST00000488522 ADM5C9JUS6 153 aa15.9■□□□□ 0.14
TTC3-221ENST00000488522 PCCAP05165 728 aaPredicted RBP15.9■□□□□ 0.14
TTC3-221ENST00000488522 GOLGA2Q08379 1002 aa15.9■□□□□ 0.14
TTC3-221ENST00000488522 C2orf69Q8N8R5 385 aa15.9■□□□□ 0.14
TTC3-221ENST00000488522 AGBL3Q8NEM8 1001 aa15.9■□□□□ 0.14
TTC3-221ENST00000488522 ZC3H12CQ9C0D7 883 aaKnown RBP15.9■□□□□ 0.14
TTC3-221ENST00000488522 IFT57Q9NWB7 429 aa15.9■□□□□ 0.14
TTC3-221ENST00000488522 PAPPA2Q9BXP8 1791 aa15.9■□□□□ 0.14
TTC3-221ENST00000488522 AKAP11Q9UKA4 1901 aa15.9■□□□□ 0.14
TTC3-221ENST00000488522 PDE4DIPQ5VU43 2346 aa15.89■□□□□ 0.13
TTC3-221ENST00000488522 PDE8AO60658 829 aa15.89■□□□□ 0.13
TTC3-221ENST00000488522 SLC10A3P09131 477 aa15.89■□□□□ 0.13
TTC3-221ENST00000488522 DOK7Q18PE1 504 aa15.89■□□□□ 0.13
TTC3-221ENST00000488522 ZNF428Q96B54 188 aa15.89■□□□□ 0.13
TTC3-221ENST00000488522 GMLQ99445 158 aa15.89■□□□□ 0.13
TTC3-221ENST00000488522 SEC31BQ9NQW1 1179 aa15.89■□□□□ 0.13
TTC3-221ENST00000488522 GGA3Q9NZ52 723 aa15.89■□□□□ 0.13
TTC3-221ENST00000488522 PITPNM2Q9BZ72 1349 aa15.89■□□□□ 0.13
TTC3-221ENST00000488522 UFL1O94874 794 aa15.88■□□□□ 0.13
TTC3-221ENST00000488522 FKBP1BP68106 108 aa15.88■□□□□ 0.13
TTC3-221ENST00000488522 DGKZQ13574 1117 aa15.88■□□□□ 0.13
TTC3-221ENST00000488522 CCDC152Q4G0S7 254 aa15.88■□□□□ 0.13
TTC3-221ENST00000488522 RTL5Q5HYW3 569 aaPredicted RBP15.88■□□□□ 0.13
TTC3-221ENST00000488522 RIC3Q7Z5B4 369 aa15.88■□□□□ 0.13
TTC3-221ENST00000488522 SULF1Q8IWU6 871 aa15.88■□□□□ 0.13
TTC3-221ENST00000488522 PHAXQ9H814 394 aaKnown RBP15.88■□□□□ 0.13
TTC3-221ENST00000488522 GGA1Q9UJY5 639 aa15.88■□□□□ 0.13
TTC3-221ENST00000488522 XDHP47989 1333 aa15.88■□□□□ 0.13
TTC3-221ENST00000488522 MYH3P11055 1940 aa15.88■□□□□ 0.13
TTC3-221ENST00000488522 GNAI1P63096 354 aa15.87■□□□□ 0.13
TTC3-221ENST00000488522 KIF23Q02241 960 aaPredicted RBP15.87■□□□□ 0.13
TTC3-221ENST00000488522 CALD1Q05682 793 aaKnown RBP15.87■□□□□ 0.13
TTC3-221ENST00000488522 RSBN1LQ6PCB5 846 aaPredicted RBP15.87■□□□□ 0.13
TTC3-221ENST00000488522 REM2Q8IYK8 340 aaPredicted RBP15.87■□□□□ 0.13
TTC3-221ENST00000488522 CDCA5Q96FF9 252 aa15.87■□□□□ 0.13
TTC3-221ENST00000488522 ZNF157P51786 506 aaPredicted RBP15.86■□□□□ 0.13
TTC3-221ENST00000488522 METTL22Q9BUU2 404 aaPredicted RBP15.86■□□□□ 0.13
TTC3-221ENST00000488522 CWC25Q9NXE8 425 aaPredicted RBP15.86■□□□□ 0.13
TTC3-221ENST00000488522 ANKIB1Q9P2G1 1089 aa15.86■□□□□ 0.13
TTC3-221ENST00000488522 ASTN2O75129 1339 aaPredicted RBP15.86■□□□□ 0.13
TTC3-221ENST00000488522 RBM26Q5T8P6 1007 aaKnown RBP15.85■□□□□ 0.13
TTC3-221ENST00000488522 PODNQ7Z5L7 613 aa15.85■□□□□ 0.13
TTC3-221ENST00000488522 MYD88Q99836 296 aa15.85■□□□□ 0.13
TTC3-221ENST00000488522 CHMP4AQ9BY43 222 aa15.85■□□□□ 0.13
TTC3-221ENST00000488522 RNF186Q9NXI6 227 aa15.85■□□□□ 0.13
TTC3-221ENST00000488522 MED23Q9ULK4 1368 aa15.85■□□□□ 0.13
TTC3-221ENST00000488522 ATP2B4P23634 1241 aa15.84■□□□□ 0.13
TTC3-221ENST00000488522 ANGEL2Q5VTE6 544 aaKnown RBP15.84■□□□□ 0.13
TTC3-221ENST00000488522 RASAL3Q86YV0 1011 aa15.84■□□□□ 0.13
TTC3-221ENST00000488522 CSRNP1Q96S65 589 aa15.84■□□□□ 0.13
TTC3-221ENST00000488522 DDX58O95786 925 aaKnown RBP15.83■□□□□ 0.12
TTC3-221ENST00000488522 USP17L8P0C7I0 530 aa15.83■□□□□ 0.12
TTC3-221ENST00000488522 SCARF1Q14162 830 aa15.83■□□□□ 0.12
TTC3-221ENST00000488522 ANKRD18AQ8IVF6 992 aa15.83■□□□□ 0.12
TTC3-221ENST00000488522 PRKRIP1Q9H875 184 aaPredicted RBP15.83■□□□□ 0.12
TTC3-221ENST00000488522 MYOZ2Q9NPC6 264 aa15.83■□□□□ 0.12
TTC3-221ENST00000488522 USP17L3A6NCW0 530 aa15.82■□□□□ 0.12
TTC3-221ENST00000488522 USP17L4A6NCW7 530 aa15.82■□□□□ 0.12
TTC3-221ENST00000488522 G3V3G9 751 aa15.82■□□□□ 0.12
TTC3-221ENST00000488522 CTSWP56202 376 aa15.82■□□□□ 0.12
TTC3-221ENST00000488522 CACNB1Q02641 598 aaPredicted RBP15.82■□□□□ 0.12
TTC3-221ENST00000488522 DCAF8Q5TAQ9 597 aa15.82■□□□□ 0.12
TTC3-221ENST00000488522 CCDC30Q5VVM6 783 aa15.82■□□□□ 0.12
TTC3-221ENST00000488522 USP17L1Q7RTZ2 530 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms