RNA–Protein interactions for RNA: ENST00000488068.5

EPHA1-205, Transcript of EPH receptor A1, humanhuman

TSL 1 (best)

Gene EPHA1, Length 2,922 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-205ENST00000488068 ABCC12Q96J65 1359 aa17.75■□□□□ 0.43
EPHA1-205ENST00000488068 GPTP24298 496 aa17.75■□□□□ 0.43
EPHA1-205ENST00000488068 KLHL40Q2TBA0 621 aa17.75■□□□□ 0.43
EPHA1-205ENST00000488068 TTLL11Q8NHH1 800 aa17.75■□□□□ 0.43
EPHA1-205ENST00000488068 ZMYND15Q9H091 742 aa17.75■□□□□ 0.43
EPHA1-205ENST00000488068 MCTP1Q6DN14 999 aa17.75■□□□□ 0.43
EPHA1-205ENST00000488068 DDX46Q7L014 1031 aaKnown RBP17.75■□□□□ 0.43
EPHA1-205ENST00000488068 IFIT1P09914 478 aaKnown RBP17.74■□□□□ 0.43
EPHA1-205ENST00000488068 KRT32Q14532 448 aa17.74■□□□□ 0.43
EPHA1-205ENST00000488068 INTS5Q6P9B9 1019 aaKnown RBP17.74■□□□□ 0.43
EPHA1-205ENST00000488068 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
EPHA1-205ENST00000488068 LRP5O75197 1615 aa17.74■□□□□ 0.43
EPHA1-205ENST00000488068 IRS4O14654 1257 aaPredicted RBP17.74■□□□□ 0.43
EPHA1-205ENST00000488068 PDE8AO60658 829 aa17.74■□□□□ 0.43
EPHA1-205ENST00000488068 SMARCC1Q92922 1105 aaPredicted RBP17.74■□□□□ 0.43
EPHA1-205ENST00000488068 TRMT112Q9UI30 125 aaKnown RBP17.74■□□□□ 0.43
EPHA1-205ENST00000488068 RIC1Q4ADV7 1423 aa17.73■□□□□ 0.43
EPHA1-205ENST00000488068 CCDC158Q5M9N0 1113 aa17.73■□□□□ 0.43
EPHA1-205ENST00000488068 LAMB2P55268 1798 aa17.73■□□□□ 0.43
EPHA1-205ENST00000488068 LOC102724428A0A0B4J2F2 783 aa17.73■□□□□ 0.43
EPHA1-205ENST00000488068 ANKRD18BA2A2Z9 1011 aa17.73■□□□□ 0.43
EPHA1-205ENST00000488068 GOLIM4O00461 696 aa17.73■□□□□ 0.43
EPHA1-205ENST00000488068 ATP6V1AP38606 617 aa17.73■□□□□ 0.43
EPHA1-205ENST00000488068 SIK1P57059 783 aa17.73■□□□□ 0.43
EPHA1-205ENST00000488068 PIP4K2BP78356 416 aa17.73■□□□□ 0.43
EPHA1-205ENST00000488068 ANKRD1Q15327 319 aa17.73■□□□□ 0.43
EPHA1-205ENST00000488068 LMBRD1Q9NUN5 540 aa17.73■□□□□ 0.43
EPHA1-205ENST00000488068 NDUFB9Q9Y6M9 179 aa17.73■□□□□ 0.43
EPHA1-205ENST00000488068 WDR33Q9C0J8 1336 aaKnown RBP17.73■□□□□ 0.43
EPHA1-205ENST00000488068 LRRFIP1Q32MZ4 808 aaKnown RBP17.72■□□□□ 0.43
EPHA1-205ENST00000488068 RIPOR2Q9Y4F9 1068 aa17.72■□□□□ 0.43
EPHA1-205ENST00000488068 MYH14Q7Z406 1995 aaKnown RBP17.72■□□□□ 0.43
EPHA1-205ENST00000488068 MYH7P12883 1935 aa17.72■□□□□ 0.43
EPHA1-205ENST00000488068 ITGA6P23229 1130 aa17.72■□□□□ 0.43
EPHA1-205ENST00000488068 CRKLP46109 303 aaKnown RBP17.72■□□□□ 0.43
EPHA1-205ENST00000488068 TBC1D2BQ9UPU7 963 aa17.72■□□□□ 0.43
EPHA1-205ENST00000488068 CCDC9Q9Y3X0 531 aaKnown RBP17.72■□□□□ 0.43
EPHA1-205ENST00000488068 BCORQ6W2J9 1755 aa17.72■□□□□ 0.43
EPHA1-205ENST00000488068 CPA1P15085 419 aa17.71■□□□□ 0.43
EPHA1-205ENST00000488068 ZMYM1Q5SVZ6 1142 aa17.71■□□□□ 0.43
EPHA1-205ENST00000488068 BLOC1S2Q6QNY1 142 aa17.71■□□□□ 0.43
EPHA1-205ENST00000488068 ACSBG1Q96GR2 724 aa17.71■□□□□ 0.43
EPHA1-205ENST00000488068 XAGE2Q96GT9 111 aa17.71■□□□□ 0.43
EPHA1-205ENST00000488068 UBN2Q6ZU65 1347 aa17.71■□□□□ 0.43
EPHA1-205ENST00000488068 GREM2Q9H772 168 aa17.71■□□□□ 0.43
EPHA1-205ENST00000488068 DDX49Q9Y6V7 483 aaKnown RBP17.71■□□□□ 0.43
EPHA1-205ENST00000488068 ARAP2Q8WZ64 1704 aa17.71■□□□□ 0.43
EPHA1-205ENST00000488068 RPS6KB1P23443 525 aa17.71■□□□□ 0.43
EPHA1-205ENST00000488068 TTC39AQ5SRH9 613 aa17.71■□□□□ 0.43
EPHA1-205ENST00000488068 SYNE4Q8N205 404 aa17.71■□□□□ 0.43
EPHA1-205ENST00000488068 DSCC1Q9BVC3 393 aa17.7■□□□□ 0.42
EPHA1-205ENST00000488068 RNF113AO15541 343 aaKnown RBP17.7■□□□□ 0.42
EPHA1-205ENST00000488068 GORABQ5T7V8 394 aa17.7■□□□□ 0.42
EPHA1-205ENST00000488068 LDHAL6AQ6ZMR3 332 aa17.7■□□□□ 0.42
EPHA1-205ENST00000488068 DDX60Q8IY21 1712 aaKnown RBP17.69■□□□□ 0.42
EPHA1-205ENST00000488068 TPM2P07951 284 aa17.69■□□□□ 0.42
EPHA1-205ENST00000488068 VPS72Q15906 364 aa17.69■□□□□ 0.42
EPHA1-205ENST00000488068 PARP10Q53GL7 1025 aa17.69■□□□□ 0.42
EPHA1-205ENST00000488068 ZNF512BQ96KM6 892 aaPredicted RBP17.69■□□□□ 0.42
EPHA1-205ENST00000488068 SMC3Q9UQE7 1217 aa17.69■□□□□ 0.42
EPHA1-205ENST00000488068 METTL24Q5JXM2 366 aa17.69■□□□□ 0.42
EPHA1-205ENST00000488068 CCDC85AQ96PX6 553 aaPredicted RBP17.69■□□□□ 0.42
EPHA1-205ENST00000488068 ZFYP08048 801 aaPredicted RBP17.68■□□□□ 0.42
EPHA1-205ENST00000488068 PDIA4P13667 645 aaKnown RBP17.68■□□□□ 0.42
EPHA1-205ENST00000488068 ITPK1Q13572 414 aa17.68■□□□□ 0.42
EPHA1-205ENST00000488068 ATP2B3Q16720 1220 aa17.68■□□□□ 0.42
EPHA1-205ENST00000488068 SEC62Q99442 399 aaKnown RBP17.68■□□□□ 0.42
EPHA1-205ENST00000488068 LAMA4Q16363 1823 aa17.68■□□□□ 0.42
EPHA1-205ENST00000488068 AKAP11Q9UKA4 1901 aa17.68■□□□□ 0.42
EPHA1-205ENST00000488068 CAMTA2O94983 1202 aa17.68■□□□□ 0.42
EPHA1-205ENST00000488068 CCDC129Q6ZRS4 1044 aa17.68■□□□□ 0.42
EPHA1-205ENST00000488068 BCL9LQ86UU0 1499 aa17.68■□□□□ 0.42
EPHA1-205ENST00000488068 LARGE1O95461 756 aa17.68■□□□□ 0.42
EPHA1-205ENST00000488068 HSP90B1P14625 803 aaKnown RBP17.68■□□□□ 0.42
EPHA1-205ENST00000488068 ADORA1P30542 326 aa17.68■□□□□ 0.42
EPHA1-205ENST00000488068 CNNM1Q9NRU3 951 aa17.68■□□□□ 0.42
EPHA1-205ENST00000488068 CCDC173Q0VFZ6 552 aa17.67■□□□□ 0.42
EPHA1-205ENST00000488068 VGLL2Q8N8G2 317 aa17.67■□□□□ 0.42
EPHA1-205ENST00000488068 PPP1R9BQ96SB3 815 aa17.67■□□□□ 0.42
EPHA1-205ENST00000488068 A0A0G2JS52 829 aa17.67■□□□□ 0.42
EPHA1-205ENST00000488068 ME3Q16798 604 aa17.67■□□□□ 0.42
EPHA1-205ENST00000488068 CCDC83Q8IWF9 413 aa17.66■□□□□ 0.42
EPHA1-205ENST00000488068 NEK1Q96PY6 1258 aa17.66■□□□□ 0.42
EPHA1-205ENST00000488068 UTP14AQ9BVJ6 771 aaKnown RBP17.66■□□□□ 0.42
EPHA1-205ENST00000488068 PRPF40AO75400 957 aaKnown RBP17.66■□□□□ 0.42
EPHA1-205ENST00000488068 SUSD4Q5VX71 490 aa17.66■□□□□ 0.42
EPHA1-205ENST00000488068 TPCN1Q9ULQ1 816 aa17.66■□□□□ 0.42
EPHA1-205ENST00000488068 MAST3O60307 1309 aa17.65■□□□□ 0.42
EPHA1-205ENST00000488068 MROH5Q6ZUA9 1318 aa17.65■□□□□ 0.42
EPHA1-205ENST00000488068 CHGBP05060 677 aa17.65■□□□□ 0.42
EPHA1-205ENST00000488068 HMGB1P09429 215 aaKnown RBP17.65■□□□□ 0.42
EPHA1-205ENST00000488068 LARP6Q9BRS8 491 aaKnown RBP17.65■□□□□ 0.42
EPHA1-205ENST00000488068 RTL9Q8NET4 1388 aa17.65■□□□□ 0.42
EPHA1-205ENST00000488068 STX6O43752 255 aa17.65■□□□□ 0.42
EPHA1-205ENST00000488068 PDE8BO95263 885 aa17.65■□□□□ 0.42
EPHA1-205ENST00000488068 CYP21A2P08686 494 aa17.65■□□□□ 0.42
EPHA1-205ENST00000488068 ZSCAN22P10073 491 aaPredicted RBP17.65■□□□□ 0.42
EPHA1-205ENST00000488068 TAF6LQ9Y6J9 622 aa17.65■□□□□ 0.42
EPHA1-205ENST00000488068 UBAP1LF5GYI3 381 aa17.65■□□□□ 0.42
EPHA1-205ENST00000488068 RGL2O15211 777 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms