RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 TRAF5O00463 557 aa15.74■□□□□ 0.11
SDC3-204ENST00000487984 UFL1O94874 794 aa15.74■□□□□ 0.11
SDC3-204ENST00000487984 EXOSC9Q06265 439 aaKnown RBP15.74■□□□□ 0.11
SDC3-204ENST00000487984 ANKRD18AQ8IVF6 992 aa15.74■□□□□ 0.11
SDC3-204ENST00000487984 TRPM4Q8TD43 1214 aa15.74■□□□□ 0.11
SDC3-204ENST00000487984 KCNQ5Q9NR82 932 aa15.74■□□□□ 0.11
SDC3-204ENST00000487984 CNOT7Q9UIV1 285 aaKnown RBP15.74■□□□□ 0.11
SDC3-204ENST00000487984 GGA1Q9UJY5 639 aa15.74■□□□□ 0.11
SDC3-204ENST00000487984 ZBTB12Q9Y330 459 aaPredicted RBP15.74■□□□□ 0.11
SDC3-204ENST00000487984 RTL9Q8NET4 1388 aa15.74■□□□□ 0.11
SDC3-204ENST00000487984 RASSF10A6NK89 507 aa15.73■□□□□ 0.11
SDC3-204ENST00000487984 HIRAP54198 1017 aaPredicted RBP15.73■□□□□ 0.11
SDC3-204ENST00000487984 FKBP5Q13451 457 aaPredicted RBP15.73■□□□□ 0.11
SDC3-204ENST00000487984 UBE3BQ7Z3V4 1068 aa15.73■□□□□ 0.11
SDC3-204ENST00000487984 MICALL2Q8IY33 904 aa15.73■□□□□ 0.11
SDC3-204ENST00000487984 TTLL11Q8NHH1 800 aa15.73■□□□□ 0.11
SDC3-204ENST00000487984 ABT1Q9ULW3 272 aaKnown RBP15.73■□□□□ 0.11
SDC3-204ENST00000487984 H7C1W4 665 aa15.72■□□□□ 0.11
SDC3-204ENST00000487984 GCKRQ14397 625 aa15.72■□□□□ 0.11
SDC3-204ENST00000487984 DNAAF4Q8WXU2 420 aa15.72■□□□□ 0.11
SDC3-204ENST00000487984 DPF2Q92785 391 aa15.72■□□□□ 0.11
SDC3-204ENST00000487984 CDC5LQ99459 802 aaKnown RBP15.72■□□□□ 0.11
SDC3-204ENST00000487984 ZC3H12CQ9C0D7 883 aaKnown RBP15.72■□□□□ 0.11
SDC3-204ENST00000487984 GREM2Q9H772 168 aa15.72■□□□□ 0.11
SDC3-204ENST00000487984 PGAP2Q9UHJ9 254 aa15.72■□□□□ 0.11
SDC3-204ENST00000487984 XDHP47989 1333 aa15.71■□□□□ 0.11
SDC3-204ENST00000487984 H7C1D1 291 aa15.71■□□□□ 0.11
SDC3-204ENST00000487984 DEFB115Q30KQ5 88 aa15.71■□□□□ 0.11
SDC3-204ENST00000487984 CST9Q5W186 159 aa15.71■□□□□ 0.11
SDC3-204ENST00000487984 ZC3H15Q8WU90 426 aaKnown RBP15.71■□□□□ 0.11
SDC3-204ENST00000487984 GLIS2Q9BZE0 524 aaPredicted RBP15.71■□□□□ 0.11
SDC3-204ENST00000487984 MYH16Q9H6N6 1097 aa15.71■□□□□ 0.11
SDC3-204ENST00000487984 RPS12P25398 132 aaKnown RBP15.7■□□□□ 0.1
SDC3-204ENST00000487984 CASP7P55210 303 aa15.7■□□□□ 0.1
SDC3-204ENST00000487984 LINS1Q8NG48 757 aa15.7■□□□□ 0.1
SDC3-204ENST00000487984 PLA2G12BQ9BX93 195 aa15.7■□□□□ 0.1
SDC3-204ENST00000487984 BSDC1Q9NW68 430 aaPredicted RBP15.7■□□□□ 0.1
SDC3-204ENST00000487984 G3V3G9 751 aa15.69■□□□□ 0.1
SDC3-204ENST00000487984 VIL1P09327 827 aaKnown RBP15.69■□□□□ 0.1
SDC3-204ENST00000487984 ATP2B4P23634 1241 aa15.69■□□□□ 0.1
SDC3-204ENST00000487984 DCAF8Q5TAQ9 597 aa15.69■□□□□ 0.1
SDC3-204ENST00000487984 SAMD7Q7Z3H4 446 aa15.69■□□□□ 0.1
SDC3-204ENST00000487984 MINPP1Q9UNW1 487 aa15.69■□□□□ 0.1
SDC3-204ENST00000487984 WTIPA6NIX2 430 aaPredicted RBP15.68■□□□□ 0.1
SDC3-204ENST00000487984 F6X3S4 739 aa15.68■□□□□ 0.1
SDC3-204ENST00000487984 CELF2O95319 508 aaKnown RBP15.68■□□□□ 0.1
SDC3-204ENST00000487984 EGFRP00533 1210 aa15.68■□□□□ 0.1
SDC3-204ENST00000487984 TBC1D10BQ4KMP7 808 aaPredicted RBP15.68■□□□□ 0.1
SDC3-204ENST00000487984 ZNF521Q96K83 1311 aa15.68■□□□□ 0.1
SDC3-204ENST00000487984 WDR33Q9C0J8 1336 aaKnown RBP15.68■□□□□ 0.1
SDC3-204ENST00000487984 FOXN1O15353 648 aa15.67■□□□□ 0.1
SDC3-204ENST00000487984 ITGA6P23229 1130 aa15.67■□□□□ 0.1
SDC3-204ENST00000487984 FAM161AQ3B820 660 aa15.67■□□□□ 0.1
SDC3-204ENST00000487984 CDC37L1Q7L3B6 337 aa15.67■□□□□ 0.1
SDC3-204ENST00000487984 TLL2Q9Y6L7 1015 aa15.67■□□□□ 0.1
SDC3-204ENST00000487984 CSF1RP07333 972 aa15.66■□□□□ 0.1
SDC3-204ENST00000487984 IGHMBP2P38935 993 aaKnown RBP15.66■□□□□ 0.1
SDC3-204ENST00000487984 BEND3Q5T5X7 828 aa15.66■□□□□ 0.1
SDC3-204ENST00000487984 PAXIP1Q6ZW49 1069 aaPredicted RBP15.66■□□□□ 0.1
SDC3-204ENST00000487984 WBP1LQ9NX94 342 aa15.66■□□□□ 0.1
SDC3-204ENST00000487984 SCN9AQ15858 1988 aa15.66■□□□□ 0.1
SDC3-204ENST00000487984 MED23Q9ULK4 1368 aa15.65■□□□□ 0.1
SDC3-204ENST00000487984 CCT4P50991 539 aaKnown RBP15.65■□□□□ 0.1
SDC3-204ENST00000487984 KIF4BQ2VIQ3 1234 aa15.65■□□□□ 0.1
SDC3-204ENST00000487984 RBM26Q5T8P6 1007 aaKnown RBP15.65■□□□□ 0.1
SDC3-204ENST00000487984 CYP4F22Q6NT55 531 aa15.65■□□□□ 0.1
SDC3-204ENST00000487984 RSBN1LQ6PCB5 846 aaPredicted RBP15.65■□□□□ 0.1
SDC3-204ENST00000487984 SAPCD2Q86UD0 394 aa15.65■□□□□ 0.1
SDC3-204ENST00000487984 USP48Q86UV5 1035 aa15.65■□□□□ 0.1
SDC3-204ENST00000487984 TNS4Q8IZW8 715 aa15.65■□□□□ 0.1
SDC3-204ENST00000487984 AIDAQ96BJ3 306 aa15.65■□□□□ 0.1
SDC3-204ENST00000487984 CAPNS2Q96L46 248 aa15.65■□□□□ 0.1
SDC3-204ENST00000487984 ZNF408Q9H9D4 720 aa15.65■□□□□ 0.1
SDC3-204ENST00000487984 ZNF609O15014 1411 aa15.64■□□□□ 0.09
SDC3-204ENST00000487984 GRM1Q13255 1194 aa15.64■□□□□ 0.09
SDC3-204ENST00000487984 DLK2Q6UY11 383 aa15.64■□□□□ 0.09
SDC3-204ENST00000487984 PODNQ7Z5L7 613 aa15.64■□□□□ 0.09
SDC3-204ENST00000487984 AGBL3Q8NEM8 1001 aa15.64■□□□□ 0.09
SDC3-204ENST00000487984 MYH3P11055 1940 aa15.64■□□□□ 0.09
SDC3-204ENST00000487984 USP17L3A6NCW0 530 aa15.63■□□□□ 0.09
SDC3-204ENST00000487984 USP17L4A6NCW7 530 aa15.63■□□□□ 0.09
SDC3-204ENST00000487984 ECE1P42892 770 aa15.63■□□□□ 0.09
SDC3-204ENST00000487984 ZNF280AP59817 542 aaPredicted RBP15.63■□□□□ 0.09
SDC3-204ENST00000487984 USP17L1Q7RTZ2 530 aa15.63■□□□□ 0.09
SDC3-204ENST00000487984 KRT26Q7Z3Y9 468 aa15.63■□□□□ 0.09
SDC3-204ENST00000487984 GMLQ99445 158 aa15.63■□□□□ 0.09
SDC3-204ENST00000487984 MPHOSPH8Q99549 860 aa15.63■□□□□ 0.09
SDC3-204ENST00000487984 LEMD3Q9Y2U8 911 aa15.63■□□□□ 0.09
SDC3-204ENST00000487984 TRPM7Q96QT4 1865 aa15.63■□□□□ 0.09
SDC3-204ENST00000487984 ADM5C9JUS6 153 aa15.62■□□□□ 0.09
SDC3-204ENST00000487984 CTCFP49711 727 aaPredicted RBP15.62■□□□□ 0.09
SDC3-204ENST00000487984 FOXO4P98177 505 aa15.62■□□□□ 0.09
SDC3-204ENST00000487984 MAP2K1Q02750 393 aaPredicted RBP15.62■□□□□ 0.09
SDC3-204ENST00000487984 TXNRD3Q86VQ6 643 aa15.62■□□□□ 0.09
SDC3-204ENST00000487984 DCPSQ96C86 337 aaKnown RBP15.62■□□□□ 0.09
SDC3-204ENST00000487984 GGA3Q9NZ52 723 aa15.62■□□□□ 0.09
SDC3-204ENST00000487984 ASTN2O75129 1339 aaPredicted RBP15.62■□□□□ 0.09
SDC3-204ENST00000487984 CACNA1FO60840 1977 aa15.62■□□□□ 0.09
SDC3-204ENST00000487984 ANKRD18BA2A2Z9 1011 aa15.61■□□□□ 0.09
SDC3-204ENST00000487984 KLRK1P26718 216 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms