RNA–Protein interactions for RNA: ENST00000487719.1

LCN2-205, Transcript of lipocalin 2, humanhuman

TSL 1 (best)

Gene LCN2, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-205ENST00000487719 NMRK2Q9NPI5 230 aa11.75□□□□□ -0.53
LCN2-205ENST00000487719 TOMM70O94826 608 aa11.74□□□□□ -0.53
LCN2-205ENST00000487719 CSF1RP07333 972 aa11.74□□□□□ -0.53
LCN2-205ENST00000487719 PRELPP51888 382 aa11.74□□□□□ -0.53
LCN2-205ENST00000487719 GPSM2P81274 684 aa11.74□□□□□ -0.53
LCN2-205ENST00000487719 TNIP1Q15025 636 aa11.74□□□□□ -0.53
LCN2-205ENST00000487719 ZKSCAN2Q63HK3 967 aa11.74□□□□□ -0.53
LCN2-205ENST00000487719 ATF7IPQ6VMQ6 1270 aa11.74□□□□□ -0.53
LCN2-205ENST00000487719 GPC2Q8N158 579 aa11.74□□□□□ -0.53
LCN2-205ENST00000487719 RRAGCQ9HB90 399 aa11.74□□□□□ -0.53
LCN2-205ENST00000487719 PODXL2Q9NZ53 605 aa11.74□□□□□ -0.53
LCN2-205ENST00000487719 ZNRF3Q9ULT6 936 aa11.74□□□□□ -0.53
LCN2-205ENST00000487719 DUOX1Q9NRD9 1551 aa11.74□□□□□ -0.53
LCN2-205ENST00000487719 FZD9O00144 591 aa11.73□□□□□ -0.53
LCN2-205ENST00000487719 UTYO14607 1347 aa11.73□□□□□ -0.53
LCN2-205ENST00000487719 GNAI3P08754 354 aa11.73□□□□□ -0.53
LCN2-205ENST00000487719 NBPF7P0C2Y1 421 aaPredicted RBP11.73□□□□□ -0.53
LCN2-205ENST00000487719 MS4A1P11836 297 aa11.73□□□□□ -0.53
LCN2-205ENST00000487719 TBC1D16Q8TBP0 767 aa11.73□□□□□ -0.53
LCN2-205ENST00000487719 CNNM1Q9NRU3 951 aa11.73□□□□□ -0.53
LCN2-205ENST00000487719 GJA3Q9Y6H8 435 aa11.73□□□□□ -0.53
LCN2-205ENST00000487719 COL4A1P02462 1669 aa11.72□□□□□ -0.53
LCN2-205ENST00000487719 ZNF541Q9H0D2 1346 aa11.72□□□□□ -0.53
LCN2-205ENST00000487719 KIF3CO14782 793 aa11.72□□□□□ -0.53
LCN2-205ENST00000487719 RIMBP2O15034 1052 aa11.72□□□□□ -0.53
LCN2-205ENST00000487719 DDNO94850 711 aaPredicted RBP11.72□□□□□ -0.53
LCN2-205ENST00000487719 C1QTNF8P60827 252 aa11.72□□□□□ -0.53
LCN2-205ENST00000487719 FOXO4P98177 505 aa11.72□□□□□ -0.53
LCN2-205ENST00000487719 LDHAL6AQ6ZMR3 332 aa11.72□□□□□ -0.53
LCN2-205ENST00000487719 RBM46Q8TBY0 533 aaKnown RBP11.72□□□□□ -0.53
LCN2-205ENST00000487719 L3MBTL3Q96JM7 780 aaPredicted RBP11.72□□□□□ -0.53
LCN2-205ENST00000487719 HACL1Q9UJ83 578 aa11.72□□□□□ -0.53
LCN2-205ENST00000487719 LEMD3Q9Y2U8 911 aa11.72□□□□□ -0.53
LCN2-205ENST00000487719 SCN9AQ15858 1988 aa11.71□□□□□ -0.53
LCN2-205ENST00000487719 BCAR3O75815 825 aa11.71□□□□□ -0.53
LCN2-205ENST00000487719 CIAPIN1Q6FI81 312 aa11.71□□□□□ -0.53
LCN2-205ENST00000487719 SMC1BQ8NDV3 1235 aa11.71□□□□□ -0.53
LCN2-205ENST00000487719 SUCLG2Q96I99 432 aa11.71□□□□□ -0.53
LCN2-205ENST00000487719 USP44Q9H0E7 712 aa11.71□□□□□ -0.53
LCN2-205ENST00000487719 BICC1Q9H694 974 aaKnown RBP11.71□□□□□ -0.53
LCN2-205ENST00000487719 POLLQ9UGP5 575 aa11.71□□□□□ -0.53
LCN2-205ENST00000487719 MINPP1Q9UNW1 487 aa11.71□□□□□ -0.53
LCN2-205ENST00000487719 MED23Q9ULK4 1368 aa11.7□□□□□ -0.54
LCN2-205ENST00000487719 ECE2O60344 883 aa11.7□□□□□ -0.54
LCN2-205ENST00000487719 TRIM27P14373 513 aa11.7□□□□□ -0.54
LCN2-205ENST00000487719 FSTL1Q12841 308 aa11.7□□□□□ -0.54
LCN2-205ENST00000487719 INTS3Q68E01 1043 aaKnown RBP11.7□□□□□ -0.54
LCN2-205ENST00000487719 PNMA8AQ86V59 439 aaPredicted RBP11.7□□□□□ -0.54
LCN2-205ENST00000487719 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.7□□□□□ -0.54
LCN2-205ENST00000487719 DBNDD1Q9H9R9 158 aa11.7□□□□□ -0.54
LCN2-205ENST00000487719 POLR2AP24928 1970 aaKnown RBP11.7□□□□□ -0.54
LCN2-205ENST00000487719 COL4A5P29400 1685 aa11.69□□□□□ -0.54
LCN2-205ENST00000487719 ZNF804BA4D1E1 1349 aa11.69□□□□□ -0.54
LCN2-205ENST00000487719 MROH5Q6ZUA9 1318 aa11.69□□□□□ -0.54
LCN2-205ENST00000487719 CHRNDQ07001 517 aa11.69□□□□□ -0.54
LCN2-205ENST00000487719 RABL6Q3YEC7 729 aaPredicted RBP11.69□□□□□ -0.54
LCN2-205ENST00000487719 DZIP1LQ8IYY4 767 aaKnown RBP11.69□□□□□ -0.54
LCN2-205ENST00000487719 CLUAP1Q96AJ1 413 aa11.69□□□□□ -0.54
LCN2-205ENST00000487719 TRPM7Q96QT4 1865 aa11.69□□□□□ -0.54
LCN2-205ENST00000487719 RAD17O75943 681 aa11.68□□□□□ -0.54
LCN2-205ENST00000487719 RPS12P25398 132 aaKnown RBP11.68□□□□□ -0.54
LCN2-205ENST00000487719 EPHX2P34913 555 aa11.68□□□□□ -0.54
LCN2-205ENST00000487719 CXCL9Q07325 125 aa11.68□□□□□ -0.54
LCN2-205ENST00000487719 DOK7Q18PE1 504 aa11.68□□□□□ -0.54
LCN2-205ENST00000487719 EAPPQ56P03 285 aaPredicted RBP11.68□□□□□ -0.54
LCN2-205ENST00000487719 EPHA10Q5JZY3 1008 aa11.68□□□□□ -0.54
LCN2-205ENST00000487719 PODNQ7Z5L7 613 aa11.68□□□□□ -0.54
LCN2-205ENST00000487719 SLC51AQ86UW1 340 aa11.68□□□□□ -0.54
LCN2-205ENST00000487719 ITPRIPQ8IWB1 547 aa11.68□□□□□ -0.54
LCN2-205ENST00000487719 CHMP4BQ9H444 224 aaKnown RBP11.68□□□□□ -0.54
LCN2-205ENST00000487719 CLEC11AQ9Y240 323 aa11.68□□□□□ -0.54
LCN2-205ENST00000487719 H7C1D1 291 aa11.67□□□□□ -0.54
LCN2-205ENST00000487719 PLIN1O60240 522 aa11.67□□□□□ -0.54
LCN2-205ENST00000487719 METTL24Q5JXM2 366 aa11.67□□□□□ -0.54
LCN2-205ENST00000487719 ZNF804AQ7Z570 1209 aa11.67□□□□□ -0.54
LCN2-205ENST00000487719 LDHDQ86WU2 507 aa11.67□□□□□ -0.54
LCN2-205ENST00000487719 ZNF594Q96JF6 807 aaPredicted RBP11.67□□□□□ -0.54
LCN2-205ENST00000487719 YTHDC1Q96MU7 727 aaKnown RBP11.67□□□□□ -0.54
LCN2-205ENST00000487719 COA1Q9GZY4 146 aa11.67□□□□□ -0.54
LCN2-205ENST00000487719 TAF1DQ9H5J8 278 aaPredicted RBP11.67□□□□□ -0.54
LCN2-205ENST00000487719 RCAN3Q9UKA8 241 aa11.67□□□□□ -0.54
LCN2-205ENST00000487719 LRRFIP2Q9Y608 721 aaKnown RBP11.67□□□□□ -0.54
LCN2-205ENST00000487719 GNAI2P04899 355 aa11.66□□□□□ -0.54
LCN2-205ENST00000487719 VPS37DQ86XT2 251 aa11.66□□□□□ -0.54
LCN2-205ENST00000487719 ANKRD44Q8N8A2 993 aa11.66□□□□□ -0.54
LCN2-205ENST00000487719 FBXW7Q969H0 707 aa11.66□□□□□ -0.54
LCN2-205ENST00000487719 GPR101Q96P66 508 aaPredicted RBP11.66□□□□□ -0.54
LCN2-205ENST00000487719 MEIS3Q99687 375 aa11.66□□□□□ -0.54
LCN2-205ENST00000487719 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
LCN2-205ENST00000487719 ECM29Q5VYK3 1845 aa11.65□□□□□ -0.54
LCN2-205ENST00000487719 MYO3BQ8WXR4 1341 aa11.65□□□□□ -0.54
LCN2-205ENST00000487719 USP17L3A6NCW0 530 aa11.65□□□□□ -0.54
LCN2-205ENST00000487719 USP17L4A6NCW7 530 aa11.65□□□□□ -0.54
LCN2-205ENST00000487719 PSMD14O00487 310 aa11.65□□□□□ -0.54
LCN2-205ENST00000487719 TAF5LO75529 589 aa11.65□□□□□ -0.54
LCN2-205ENST00000487719 GMPSP49915 693 aaPredicted RBP11.65□□□□□ -0.54
LCN2-205ENST00000487719 UBE4AQ14139 1066 aa11.65□□□□□ -0.54
LCN2-205ENST00000487719 CHADLQ6NUI6 762 aa11.65□□□□□ -0.54
LCN2-205ENST00000487719 USP50Q70EL3 339 aaPredicted RBP11.65□□□□□ -0.54
LCN2-205ENST00000487719 USP17L1Q7RTZ2 530 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms