RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 J3QW42 95 aa7.35□□□□□ -1.23
TTC3-220ENST00000487711 RGS9O75916 674 aaPredicted RBP7.35□□□□□ -1.23
TTC3-220ENST00000487711 GHRHP01286 108 aa7.35□□□□□ -1.23
TTC3-220ENST00000487711 ALBP02768 609 aa7.35□□□□□ -1.23
TTC3-220ENST00000487711 HOXD8P13378 290 aaPredicted RBP7.35□□□□□ -1.23
TTC3-220ENST00000487711 SNRPNP63162 240 aaKnown RBP7.35□□□□□ -1.23
TTC3-220ENST00000487711 NUDT8Q8WV74 236 aa7.35□□□□□ -1.23
TTC3-220ENST00000487711 PMEPA1Q969W9 287 aa7.35□□□□□ -1.23
TTC3-220ENST00000487711 SPACA7Q96KW9 195 aa7.35□□□□□ -1.23
TTC3-220ENST00000487711 FAM129BQ96TA1 746 aa7.35□□□□□ -1.23
TTC3-220ENST00000487711 RBCK1Q9BYM8 510 aa7.35□□□□□ -1.23
TTC3-220ENST00000487711 RBSNQ9H1K0 784 aa7.35□□□□□ -1.23
TTC3-220ENST00000487711 JPH1Q9HDC5 661 aaPredicted RBP7.35□□□□□ -1.23
TTC3-220ENST00000487711 KANSL3Q9P2N6 904 aa7.35□□□□□ -1.23
TTC3-220ENST00000487711 MKL2Q9ULH7 1088 aa7.35□□□□□ -1.23
TTC3-220ENST00000487711 NEFLP07196 543 aa7.34□□□□□ -1.23
TTC3-220ENST00000487711 DGKGP49619 791 aa7.34□□□□□ -1.23
TTC3-220ENST00000487711 PERM1Q5SV97 790 aa7.34□□□□□ -1.23
TTC3-220ENST00000487711 COL13A1Q5TAT6 717 aaPredicted RBP7.34□□□□□ -1.23
TTC3-220ENST00000487711 NCAPG2Q86XI2 1143 aa7.34□□□□□ -1.23
TTC3-220ENST00000487711 MICALL1Q8N3F8 863 aa7.34□□□□□ -1.23
TTC3-220ENST00000487711 BEND7Q8N7W2 519 aaPredicted RBP7.34□□□□□ -1.23
TTC3-220ENST00000487711 SCARF2Q96GP6 870 aaPredicted RBP7.34□□□□□ -1.23
TTC3-220ENST00000487711 DMRTB1Q96MA1 342 aa7.34□□□□□ -1.23
TTC3-220ENST00000487711 CNTNAP5Q8WYK1 1306 aa7.33□□□□□ -1.24
TTC3-220ENST00000487711 LILRB5O75023 590 aa7.33□□□□□ -1.24
TTC3-220ENST00000487711 HOXB4P17483 251 aaPredicted RBP7.33□□□□□ -1.24
TTC3-220ENST00000487711 C8orf86Q6ZUL3 223 aa7.33□□□□□ -1.24
TTC3-220ENST00000487711 TMC7Q7Z402 723 aa7.33□□□□□ -1.24
TTC3-220ENST00000487711 PLD4Q96BZ4 506 aa7.33□□□□□ -1.24
TTC3-220ENST00000487711 NIF3L1Q9GZT8 377 aa7.33□□□□□ -1.24
TTC3-220ENST00000487711 SMG9Q9H0W8 520 aaKnown RBP7.33□□□□□ -1.24
TTC3-220ENST00000487711 CHRDQ9H2X0 955 aa7.33□□□□□ -1.24
TTC3-220ENST00000487711 PIK3R2O00459 728 aa7.32□□□□□ -1.24
TTC3-220ENST00000487711 EREGO14944 169 aa7.32□□□□□ -1.24
TTC3-220ENST00000487711 GPR182O15218 404 aa7.32□□□□□ -1.24
TTC3-220ENST00000487711 KIF4AO95239 1232 aa7.32□□□□□ -1.24
TTC3-220ENST00000487711 C20orf204Q6ZNR8 217 aa7.32□□□□□ -1.24
TTC3-220ENST00000487711 ZSCAN29Q8IWY8 852 aaPredicted RBP7.32□□□□□ -1.24
TTC3-220ENST00000487711 LPIN3Q9BQK8 851 aa7.32□□□□□ -1.24
TTC3-220ENST00000487711 FRRS1LQ9P0K9 344 aa7.32□□□□□ -1.24
TTC3-220ENST00000487711 AMOTL2Q9Y2J4 779 aa7.32□□□□□ -1.24
TTC3-220ENST00000487711 GNB5O14775 395 aa7.31□□□□□ -1.24
TTC3-220ENST00000487711 ORC1Q13415 861 aa7.31□□□□□ -1.24
TTC3-220ENST00000487711 LINC00114Q6XXX2 140 aa7.31□□□□□ -1.24
TTC3-220ENST00000487711 ZFYVE28Q9HCC9 887 aa7.31□□□□□ -1.24
TTC3-220ENST00000487711 RNF225M0QZC1 329 aaPredicted RBP7.3□□□□□ -1.24
TTC3-220ENST00000487711 ATP11AP98196 1134 aa7.3□□□□□ -1.24
TTC3-220ENST00000487711 ALKBH8Q96BT7 664 aaKnown RBP7.3□□□□□ -1.24
TTC3-220ENST00000487711 ASB16Q96NS5 453 aa7.3□□□□□ -1.24
TTC3-220ENST00000487711 PRDM6Q9NQX0 595 aa7.3□□□□□ -1.24
TTC3-220ENST00000487711 SALL4Q9UJQ4 1053 aa7.3□□□□□ -1.24
TTC3-220ENST00000487711 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.3□□□□□ -1.24
TTC3-220ENST00000487711 CPNE3O75131 537 aaKnown RBP7.29□□□□□ -1.24
TTC3-220ENST00000487711 SMNDC1O75940 238 aaKnown RBP eCLIP7.29□□□□□ -1.24
TTC3-220ENST00000487711 IGHA2P01877 340 aa7.29□□□□□ -1.24
TTC3-220ENST00000487711 POLR3DP05423 398 aaPredicted RBP7.29□□□□□ -1.24
TTC3-220ENST00000487711 EDN3P14138 238 aa7.29□□□□□ -1.24
TTC3-220ENST00000487711 IRS1P35568 1242 aa7.29□□□□□ -1.24
TTC3-220ENST00000487711 AFF1P51825 1210 aaKnown RBP7.29□□□□□ -1.24
TTC3-220ENST00000487711 PLCB3Q01970 1234 aa7.29□□□□□ -1.24
TTC3-220ENST00000487711 GDF6Q6KF10 455 aaPredicted RBP7.29□□□□□ -1.24
TTC3-220ENST00000487711 CEP120Q8N960 986 aa7.29□□□□□ -1.24
TTC3-220ENST00000487711 RASSF4Q9H2L5 321 aa7.29□□□□□ -1.24
TTC3-220ENST00000487711 EIF1AYO14602 144 aaKnown RBP7.28□□□□□ -1.24
TTC3-220ENST00000487711 TREHO43280 583 aa7.28□□□□□ -1.24
TTC3-220ENST00000487711 USPL1Q5W0Q7 1092 aa7.28□□□□□ -1.24
TTC3-220ENST00000487711 CEP135Q66GS9 1140 aa7.28□□□□□ -1.24
TTC3-220ENST00000487711 TTC9Q92623 222 aa7.28□□□□□ -1.24
TTC3-220ENST00000487711 PLVAPQ9BX97 442 aa7.28□□□□□ -1.24
TTC3-220ENST00000487711 PBX4Q9BYU1 374 aa7.28□□□□□ -1.24
TTC3-220ENST00000487711 NID1P14543 1247 aa7.27□□□□□ -1.25
TTC3-220ENST00000487711 ACPPP15309 386 aa7.27□□□□□ -1.25
TTC3-220ENST00000487711 CCDC27Q2M243 656 aa7.27□□□□□ -1.25
TTC3-220ENST00000487711 TRAPPC3LQ5T215 181 aa7.27□□□□□ -1.25
TTC3-220ENST00000487711 TRIM11Q96F44 468 aa7.27□□□□□ -1.25
TTC3-220ENST00000487711 CSRNP1Q96S65 589 aa7.27□□□□□ -1.25
TTC3-220ENST00000487711 DNAJC25Q9H1X3 360 aa7.27□□□□□ -1.25
TTC3-220ENST00000487711 NOP53Q9NZM5 478 aaKnown RBP7.27□□□□□ -1.25
TTC3-220ENST00000487711 TRIM33Q9UPN9 1127 aa7.27□□□□□ -1.25
TTC3-220ENST00000487711 SPDYE3A6NKU9 549 aa7.26□□□□□ -1.25
TTC3-220ENST00000487711 TRPA1O75762 1119 aa7.26□□□□□ -1.25
TTC3-220ENST00000487711 MAPK8P45983 427 aa7.26□□□□□ -1.25
TTC3-220ENST00000487711 COL9A3Q14050 684 aaPredicted RBP7.26□□□□□ -1.25
TTC3-220ENST00000487711 DSC3Q14574 896 aa7.26□□□□□ -1.25
TTC3-220ENST00000487711 GRIK5Q16478 980 aa7.26□□□□□ -1.25
TTC3-220ENST00000487711 WFDC8Q8IUA0 241 aa7.26□□□□□ -1.25
TTC3-220ENST00000487711 DMRTC2Q8IXT2 367 aaPredicted RBP7.26□□□□□ -1.25
TTC3-220ENST00000487711 OSMRQ99650 979 aa7.26□□□□□ -1.25
TTC3-220ENST00000487711 LACRTQ9GZZ8 138 aa7.26□□□□□ -1.25
TTC3-220ENST00000487711 SUV39H2Q9H5I1 410 aa7.26□□□□□ -1.25
TTC3-220ENST00000487711 LATS2Q9NRM7 1088 aa7.26□□□□□ -1.25
TTC3-220ENST00000487711 DZANK1Q9NVP4 752 aa7.26□□□□□ -1.25
TTC3-220ENST00000487711 PNMA6FA0A0J9YX94 578 aa7.25□□□□□ -1.25
TTC3-220ENST00000487711 FAM177BA6PVY3 158 aa7.25□□□□□ -1.25
TTC3-220ENST00000487711 MSL1Q68DK7 614 aa7.25□□□□□ -1.25
TTC3-220ENST00000487711 GALNT12Q8IXK2 581 aa7.25□□□□□ -1.25
TTC3-220ENST00000487711 IL22RA1Q8N6P7 574 aa7.25□□□□□ -1.25
TTC3-220ENST00000487711 ZKSCAN3Q9BRR0 538 aa7.25□□□□□ -1.25
TTC3-220ENST00000487711 ANKRD33BA6NCL7 494 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 160.7 ms