RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 EP400Q96L91 3159 aa8.97□□□□□ -0.97
SEC22C-215ENST00000487701 MEN1O00255 615 aa8.97□□□□□ -0.97
SEC22C-215ENST00000487701 MYCP01106 439 aaPredicted RBP8.97□□□□□ -0.97
SEC22C-215ENST00000487701 LORP23490 312 aaPredicted RBP8.97□□□□□ -0.97
SEC22C-215ENST00000487701 ZC3H6P61129 1189 aaKnown RBP8.97□□□□□ -0.97
SEC22C-215ENST00000487701 CYP2U1Q7Z449 544 aa8.97□□□□□ -0.97
SEC22C-215ENST00000487701 HDGFL2Q7Z4V5 671 aaPredicted RBP8.97□□□□□ -0.97
SEC22C-215ENST00000487701 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.97□□□□□ -0.97
SEC22C-215ENST00000487701 KDF1Q8NAX2 398 aaPredicted RBP8.97□□□□□ -0.97
SEC22C-215ENST00000487701 CCDC85AQ96PX6 553 aaPredicted RBP8.97□□□□□ -0.97
SEC22C-215ENST00000487701 QTRT2Q9H974 415 aaKnown RBP8.97□□□□□ -0.97
SEC22C-215ENST00000487701 DOLKQ9UPQ8 538 aa8.97□□□□□ -0.97
SEC22C-215ENST00000487701 CPDO75976 1380 aa8.97□□□□□ -0.97
SEC22C-215ENST00000487701 USP31Q70CQ4 1352 aa8.97□□□□□ -0.97
SEC22C-215ENST00000487701 MAP2P11137 1827 aaKnown RBP8.96□□□□□ -0.97
SEC22C-215ENST00000487701 GCP02774 474 aa8.96□□□□□ -0.98
SEC22C-215ENST00000487701 SOX11P35716 441 aa8.96□□□□□ -0.98
SEC22C-215ENST00000487701 CHRNA2Q15822 529 aa8.96□□□□□ -0.98
SEC22C-215ENST00000487701 NLRP13Q86W25 1043 aa8.96□□□□□ -0.98
SEC22C-215ENST00000487701 NME9Q86XW9 330 aa8.96□□□□□ -0.98
SEC22C-215ENST00000487701 UNC5CLQ8IV45 518 aa8.96□□□□□ -0.98
SEC22C-215ENST00000487701 RNF217Q8TC41 542 aa8.96□□□□□ -0.98
SEC22C-215ENST00000487701 TERF2IPQ9NYB0 399 aa8.96□□□□□ -0.98
SEC22C-215ENST00000487701 TRPC5Q9UL62 973 aaPredicted RBP8.96□□□□□ -0.98
SEC22C-215ENST00000487701 RGPD2P0DJD1 1756 aa8.96□□□□□ -0.98
SEC22C-215ENST00000487701 THSD7AQ9UPZ6 1657 aa8.95□□□□□ -0.98
SEC22C-215ENST00000487701 RXRBP28702 533 aa8.95□□□□□ -0.98
SEC22C-215ENST00000487701 RBM6P78332 1123 aaKnown RBP8.95□□□□□ -0.98
SEC22C-215ENST00000487701 CDCA8Q53HL2 280 aa8.95□□□□□ -0.98
SEC22C-215ENST00000487701 OXLD1Q5BKU9 147 aa8.95□□□□□ -0.98
SEC22C-215ENST00000487701 FOXD4L5Q5VV16 416 aaPredicted RBP8.95□□□□□ -0.98
SEC22C-215ENST00000487701 CDCA7Q9BWT1 371 aaPredicted RBP8.95□□□□□ -0.98
SEC22C-215ENST00000487701 PRDM11Q9NQV5 511 aa8.95□□□□□ -0.98
SEC22C-215ENST00000487701 BTG4Q9NY30 223 aa8.95□□□□□ -0.98
SEC22C-215ENST00000487701 ABCC6O95255 1503 aa8.95□□□□□ -0.98
SEC22C-215ENST00000487701 PTSQ03393 145 aa8.94□□□□□ -0.98
SEC22C-215ENST00000487701 OSBPL3Q9H4L5 887 aa8.94□□□□□ -0.98
SEC22C-215ENST00000487701 ARHGEF10LQ9HCE6 1279 aa8.94□□□□□ -0.98
SEC22C-215ENST00000487701 NSD3Q9BZ95 1437 aa8.94□□□□□ -0.98
SEC22C-215ENST00000487701 COL5A2P05997 1499 aaPredicted RBP8.94□□□□□ -0.98
SEC22C-215ENST00000487701 PEAK1Q9H792 1746 aa8.94□□□□□ -0.98
SEC22C-215ENST00000487701 A0A1W2PRU2 124 aa8.93□□□□□ -0.98
SEC22C-215ENST00000487701 PPFIA3O75145 1194 aa8.93□□□□□ -0.98
SEC22C-215ENST00000487701 VPS72Q15906 364 aa8.93□□□□□ -0.98
SEC22C-215ENST00000487701 ZSCAN1Q8NBB4 408 aa8.93□□□□□ -0.98
SEC22C-215ENST00000487701 NLRP3Q96P20 1036 aa8.93□□□□□ -0.98
SEC22C-215ENST00000487701 RAB6BQ9NRW1 208 aa8.93□□□□□ -0.98
SEC22C-215ENST00000487701 FAM208AQ9UK61 1670 aaKnown RBP8.93□□□□□ -0.98
SEC22C-215ENST00000487701 PARP4Q9UKK3 1724 aaKnown RBP8.92□□□□□ -0.98
SEC22C-215ENST00000487701 AATKQ6ZMQ8 1374 aa8.92□□□□□ -0.98
SEC22C-215ENST00000487701 KIF7Q2M1P5 1343 aa8.92□□□□□ -0.98
SEC22C-215ENST00000487701 FAM181BA6NEQ2 426 aa8.92□□□□□ -0.98
SEC22C-215ENST00000487701 VSIG8P0DPA2 414 aa8.92□□□□□ -0.98
SEC22C-215ENST00000487701 TSGA10IPQ3SY00 556 aa8.92□□□□□ -0.98
SEC22C-215ENST00000487701 PHTF2Q8N3S3 785 aa8.92□□□□□ -0.98
SEC22C-215ENST00000487701 POLR3GLQ9BT43 218 aa8.92□□□□□ -0.98
SEC22C-215ENST00000487701 SPATA31A5Q5VU36 1347 aa8.91□□□□□ -0.98
SEC22C-215ENST00000487701 SPATA31A7Q8IWB4 1347 aa8.91□□□□□ -0.98
SEC22C-215ENST00000487701 TRAK2O60296 914 aa8.91□□□□□ -0.98
SEC22C-215ENST00000487701 USP4Q13107 963 aa8.91□□□□□ -0.98
SEC22C-215ENST00000487701 LYSMD3Q7Z3D4 306 aa8.91□□□□□ -0.98
SEC22C-215ENST00000487701 PRICKLE2Q7Z3G6 844 aa8.91□□□□□ -0.98
SEC22C-215ENST00000487701 ARHGEF25Q86VW2 580 aa8.91□□□□□ -0.98
SEC22C-215ENST00000487701 KCNH5Q8NCM2 988 aa8.91□□□□□ -0.98
SEC22C-215ENST00000487701 LRRC37A3O60309 1634 aa8.91□□□□□ -0.98
SEC22C-215ENST00000487701 ZBTB7CA1YPR0 619 aa8.9□□□□□ -0.98
SEC22C-215ENST00000487701 FYB1O15117 783 aa8.9□□□□□ -0.98
SEC22C-215ENST00000487701 RNF144AP50876 292 aaPredicted RBP8.9□□□□□ -0.98
SEC22C-215ENST00000487701 CLN3Q13286 438 aa8.9□□□□□ -0.98
SEC22C-215ENST00000487701 SLC27A3Q5K4L6 730 aa8.9□□□□□ -0.98
SEC22C-215ENST00000487701 LARP1Q6PKG0 1096 aaKnown RBP8.9□□□□□ -0.98
SEC22C-215ENST00000487701 CCDC155Q8N6L0 562 aa8.9□□□□□ -0.98
SEC22C-215ENST00000487701 PLPP7Q8NBV4 271 aa8.9□□□□□ -0.98
SEC22C-215ENST00000487701 CLUAP1Q96AJ1 413 aa8.9□□□□□ -0.98
SEC22C-215ENST00000487701 SBF2Q86WG5 1849 aa8.89□□□□□ -0.99
SEC22C-215ENST00000487701 CCDC7Q96M83 1385 aa8.89□□□□□ -0.99
SEC22C-215ENST00000487701 SPATA31A1Q5TZJ5 1347 aa8.89□□□□□ -0.99
SEC22C-215ENST00000487701 POM121CA8CG34 1229 aa8.89□□□□□ -0.99
SEC22C-215ENST00000487701 PIK3CDO00329 1044 aa8.89□□□□□ -0.99
SEC22C-215ENST00000487701 GNRH1P01148 92 aa8.89□□□□□ -0.99
SEC22C-215ENST00000487701 RHOQP17081 205 aa8.89□□□□□ -0.99
SEC22C-215ENST00000487701 FBLN1P23142 703 aa8.89□□□□□ -0.99
SEC22C-215ENST00000487701 GGNBP2Q9H3C7 697 aa8.89□□□□□ -0.99
SEC22C-215ENST00000487701 STRN4Q9NRL3 753 aa8.89□□□□□ -0.99
SEC22C-215ENST00000487701 CCDC9Q9Y3X0 531 aaKnown RBP8.89□□□□□ -0.99
SEC22C-215ENST00000487701 WASHC2AQ641Q2 1341 aa8.88□□□□□ -0.99
SEC22C-215ENST00000487701 GPC1P35052 558 aa8.88□□□□□ -0.99
SEC22C-215ENST00000487701 MAP7D1Q3KQU3 841 aa8.88□□□□□ -0.99
SEC22C-215ENST00000487701 COG3Q96JB2 828 aa8.88□□□□□ -0.99
SEC22C-215ENST00000487701 PANK3Q9H999 370 aa8.88□□□□□ -0.99
SEC22C-215ENST00000487701 KAT6BQ8WYB5 2073 aa8.88□□□□□ -0.99
SEC22C-215ENST00000487701 SHANK3Q9BYB0 1731 aa8.88□□□□□ -0.99
SEC22C-215ENST00000487701 CRB1P82279 1406 aa8.88□□□□□ -0.99
SEC22C-215ENST00000487701 MAP3K19Q56UN5 1328 aa8.87□□□□□ -0.99
SEC22C-215ENST00000487701 SLC35F4A4IF30 521 aa8.87□□□□□ -0.99
SEC22C-215ENST00000487701 SKIP12755 728 aa8.87□□□□□ -0.99
SEC22C-215ENST00000487701 CNKSR1Q969H4 720 aa8.87□□□□□ -0.99
SEC22C-215ENST00000487701 ALG2Q9H553 416 aa8.87□□□□□ -0.99
SEC22C-215ENST00000487701 TNS1Q9HBL0 1735 aaKnown RBP8.87□□□□□ -0.99
SEC22C-215ENST00000487701 BLMP54132 1417 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms