RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 REM2Q8IYK8 340 aaPredicted RBP7.97□□□□□ -1.13
COL4A3-206ENST00000487633 VPS33BQ9H267 617 aa7.97□□□□□ -1.13
COL4A3-206ENST00000487633 PTCH2Q9Y6C5 1203 aa7.97□□□□□ -1.13
COL4A3-206ENST00000487633 MAP3K15Q6ZN16 1313 aa7.97□□□□□ -1.13
COL4A3-206ENST00000487633 ECE2O60344 883 aa7.96□□□□□ -1.14
COL4A3-206ENST00000487633 NBPF9Q3BBW0 867 aa7.96□□□□□ -1.14
COL4A3-206ENST00000487633 GRIPAP1Q4V328 841 aa7.96□□□□□ -1.14
COL4A3-206ENST00000487633 MCM10Q7L590 875 aa7.96□□□□□ -1.14
COL4A3-206ENST00000487633 MXD3Q9BW11 206 aa7.96□□□□□ -1.14
COL4A3-206ENST00000487633 NYXQ9GZU5 481 aa7.96□□□□□ -1.14
COL4A3-206ENST00000487633 OTOFQ9HC10 1997 aa7.95□□□□□ -1.14
COL4A3-206ENST00000487633 PRUNE2Q8WUY3 3088 aa7.95□□□□□ -1.14
COL4A3-206ENST00000487633 SNRPA1P09661 255 aaKnown RBP7.95□□□□□ -1.14
COL4A3-206ENST00000487633 GJA5P36382 358 aa7.95□□□□□ -1.14
COL4A3-206ENST00000487633 GPSM2P81274 684 aa7.95□□□□□ -1.14
COL4A3-206ENST00000487633 CDCA8Q53HL2 280 aa7.95□□□□□ -1.14
COL4A3-206ENST00000487633 SPRYD7Q5W111 196 aa7.95□□□□□ -1.14
COL4A3-206ENST00000487633 IFNL1Q8IU54 200 aa7.95□□□□□ -1.14
COL4A3-206ENST00000487633 SUPT20HQ8NEM7 779 aa7.95□□□□□ -1.14
COL4A3-206ENST00000487633 SH3TC2Q8TF17 1288 aa7.95□□□□□ -1.14
COL4A3-206ENST00000487633 CELF1Q92879 486 aaKnown RBP7.95□□□□□ -1.14
COL4A3-206ENST00000487633 CLMNQ96JQ2 1002 aa7.95□□□□□ -1.14
COL4A3-206ENST00000487633 PTPN18Q99952 460 aa7.95□□□□□ -1.14
COL4A3-206ENST00000487633 THUMPD2Q9BTF0 503 aaKnown RBP7.95□□□□□ -1.14
COL4A3-206ENST00000487633 IBTKQ9P2D0 1353 aaPredicted RBP7.95□□□□□ -1.14
COL4A3-206ENST00000487633 SSC5DA1L4H1 1573 aa7.94□□□□□ -1.14
COL4A3-206ENST00000487633 DLG5Q8TDM6 1919 aa7.94□□□□□ -1.14
COL4A3-206ENST00000487633 RGL2O15211 777 aa7.94□□□□□ -1.14
COL4A3-206ENST00000487633 VIL1P09327 827 aaKnown RBP7.94□□□□□ -1.14
COL4A3-206ENST00000487633 MYL6BP14649 208 aa7.94□□□□□ -1.14
COL4A3-206ENST00000487633 ZNF280AP59817 542 aaPredicted RBP7.94□□□□□ -1.14
COL4A3-206ENST00000487633 CRHR2Q13324 411 aa7.94□□□□□ -1.14
COL4A3-206ENST00000487633 MTFR1Q15390 333 aa7.94□□□□□ -1.14
COL4A3-206ENST00000487633 SLC10A5Q5PT55 438 aa7.94□□□□□ -1.14
COL4A3-206ENST00000487633 LRP10Q7Z4F1 713 aa7.94□□□□□ -1.14
COL4A3-206ENST00000487633 NLRP3Q96P20 1036 aa7.94□□□□□ -1.14
COL4A3-206ENST00000487633 ARHGAP39Q9C0H5 1083 aa7.94□□□□□ -1.14
COL4A3-206ENST00000487633 RRP7AQ9Y3A4 280 aaKnown RBP7.94□□□□□ -1.14
COL4A3-206ENST00000487633 ERVV-1B6SEH8 477 aa7.93□□□□□ -1.14
COL4A3-206ENST00000487633 ECM2O94769 699 aaPredicted RBP7.93□□□□□ -1.14
COL4A3-206ENST00000487633 ANXA1P04083 346 aa7.93□□□□□ -1.14
COL4A3-206ENST00000487633 FKBP1BP68106 108 aa7.93□□□□□ -1.14
COL4A3-206ENST00000487633 TTLL12Q14166 644 aaPredicted RBP7.93□□□□□ -1.14
COL4A3-206ENST00000487633 WASHC4Q2M389 1173 aa7.93□□□□□ -1.14
COL4A3-206ENST00000487633 UBE2Q1Q7Z7E8 422 aa7.93□□□□□ -1.14
COL4A3-206ENST00000487633 DPF3Q92784 378 aa7.93□□□□□ -1.14
COL4A3-206ENST00000487633 GMLQ99445 158 aa7.93□□□□□ -1.14
COL4A3-206ENST00000487633 EFCC1Q9HA90 598 aa7.93□□□□□ -1.14
COL4A3-206ENST00000487633 STAP2Q9UGK3 403 aa7.93□□□□□ -1.14
COL4A3-206ENST00000487633 NSFL1CQ9UNZ2 370 aaKnown RBP7.93□□□□□ -1.14
COL4A3-206ENST00000487633 CDH23Q9H251 3354 aa7.92□□□□□ -1.14
COL4A3-206ENST00000487633 BBOX1O75936 387 aa7.92□□□□□ -1.14
COL4A3-206ENST00000487633 RPS12P25398 132 aaKnown RBP7.92□□□□□ -1.14
COL4A3-206ENST00000487633 GRAPQ13588 217 aa7.92□□□□□ -1.14
COL4A3-206ENST00000487633 PROSER3Q2NL68 480 aa7.92□□□□□ -1.14
COL4A3-206ENST00000487633 SLC4A8Q2Y0W8 1093 aa7.92□□□□□ -1.14
COL4A3-206ENST00000487633 LDLRAD1Q5T700 205 aa7.92□□□□□ -1.14
COL4A3-206ENST00000487633 GRAPLQ8TC17 118 aaPredicted RBP7.92□□□□□ -1.14
COL4A3-206ENST00000487633 TMEM106CQ9BVX2 250 aa7.92□□□□□ -1.14
COL4A3-206ENST00000487633 MYOZ2Q9NPC6 264 aa7.92□□□□□ -1.14
COL4A3-206ENST00000487633 C6orf229H3BNL8 230 aa7.91□□□□□ -1.14
COL4A3-206ENST00000487633 ZBTB7BO15156 539 aaPredicted RBP7.91□□□□□ -1.14
COL4A3-206ENST00000487633 DIAPH1O60610 1272 aaKnown RBP7.91□□□□□ -1.14
COL4A3-206ENST00000487633 CTGFP29279 349 aa7.91□□□□□ -1.14
COL4A3-206ENST00000487633 SREBF2Q12772 1141 aa7.91□□□□□ -1.14
COL4A3-206ENST00000487633 AMER1Q5JTC6 1135 aaPredicted RBP7.91□□□□□ -1.14
COL4A3-206ENST00000487633 GIGYF2Q6Y7W6 1299 aaKnown RBP7.91□□□□□ -1.14
COL4A3-206ENST00000487633 DEFB123Q8N688 67 aa7.91□□□□□ -1.14
COL4A3-206ENST00000487633 TBC1D16Q8TBP0 767 aa7.91□□□□□ -1.14
COL4A3-206ENST00000487633 PCDHAC2Q9Y5I4 1007 aa7.91□□□□□ -1.14
COL4A3-206ENST00000487633 AOX1Q06278 1338 aa7.91□□□□□ -1.14
COL4A3-206ENST00000487633 ERBB4Q15303 1308 aa7.91□□□□□ -1.14
COL4A3-206ENST00000487633 LAMA2P24043 3122 aaKnown RBP7.91□□□□□ -1.14
COL4A3-206ENST00000487633 SPEF2Q9C093 1822 aa7.9□□□□□ -1.14
COL4A3-206ENST00000487633 SASH1O94885 1247 aa7.9□□□□□ -1.14
COL4A3-206ENST00000487633 SP3Q02447 781 aa7.9□□□□□ -1.14
COL4A3-206ENST00000487633 PDIA6Q15084 440 aa7.9□□□□□ -1.14
COL4A3-206ENST00000487633 SLC9C1Q4G0N8 1177 aa7.9□□□□□ -1.14
COL4A3-206ENST00000487633 RSBN1LQ6PCB5 846 aaPredicted RBP7.9□□□□□ -1.14
COL4A3-206ENST00000487633 GAS2L2Q8NHY3 880 aa7.9□□□□□ -1.14
COL4A3-206ENST00000487633 ERO1AQ96HE7 468 aa7.9□□□□□ -1.14
COL4A3-206ENST00000487633 WNK4Q96J92 1243 aa7.9□□□□□ -1.14
COL4A3-206ENST00000487633 UTP14AQ9BVJ6 771 aaKnown RBP7.9□□□□□ -1.14
COL4A3-206ENST00000487633 PRDM6Q9NQX0 595 aa7.9□□□□□ -1.14
COL4A3-206ENST00000487633 MTMR10Q9NXD2 777 aa7.9□□□□□ -1.14
COL4A3-206ENST00000487633 ANGEL1Q9UNK9 670 aaKnown RBP7.9□□□□□ -1.14
COL4A3-206ENST00000487633 WNT10BO00744 389 aa7.89□□□□□ -1.15
COL4A3-206ENST00000487633 U2SURPO15042 1029 aaKnown RBP7.89□□□□□ -1.15
COL4A3-206ENST00000487633 PRKAR2BP31323 418 aa7.89□□□□□ -1.15
COL4A3-206ENST00000487633 DDX46Q7L014 1031 aaKnown RBP7.89□□□□□ -1.15
COL4A3-206ENST00000487633 NLRP10Q86W26 655 aa7.89□□□□□ -1.15
COL4A3-206ENST00000487633 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.89□□□□□ -1.15
COL4A3-206ENST00000487633 CNKSR2Q8WXI2 1034 aa7.89□□□□□ -1.15
COL4A3-206ENST00000487633 RSPH6AQ9H0K4 717 aa7.89□□□□□ -1.15
COL4A3-206ENST00000487633 STXBP5LQ9Y2K9 1186 aa7.89□□□□□ -1.15
COL4A3-206ENST00000487633 ECM29Q5VYK3 1845 aa7.88□□□□□ -1.15
COL4A3-206ENST00000487633 USP17L8P0C7I0 530 aa7.88□□□□□ -1.15
COL4A3-206ENST00000487633 COL9A1P20849 921 aa7.88□□□□□ -1.15
COL4A3-206ENST00000487633 KIF6Q6ZMV9 814 aa7.88□□□□□ -1.15
COL4A3-206ENST00000487633 PPP1R42Q7Z4L9 355 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms