RNA–Protein interactions for RNA: ENST00000487621.5

SEMA3C-209, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-209ENST00000487621 COL13A1Q5TAT6 717 aaPredicted RBP31.78■■■□□ 2.68
SEMA3C-209ENST00000487621 ECE2O60344 883 aa31.77■■■□□ 2.68
SEMA3C-209ENST00000487621 VEGFBP49765 207 aa31.77■■■□□ 2.68
SEMA3C-209ENST00000487621 DOK7Q18PE1 504 aa31.77■■■□□ 2.68
SEMA3C-209ENST00000487621 FAM9BQ8IZU0 186 aa31.77■■■□□ 2.68
SEMA3C-209ENST00000487621 DPF2Q92785 391 aa31.77■■■□□ 2.68
SEMA3C-209ENST00000487621 KCNQ5Q9NR82 932 aa31.77■■■□□ 2.68
SEMA3C-209ENST00000487621 CNOT7Q9UIV1 285 aaKnown RBP31.77■■■□□ 2.68
SEMA3C-209ENST00000487621 ZBTB12Q9Y330 459 aaPredicted RBP31.77■■■□□ 2.68
SEMA3C-209ENST00000487621 RTL9Q8NET4 1388 aa31.77■■■□□ 2.68
SEMA3C-209ENST00000487621 ANKRD18AQ8IVF6 992 aa31.76■■■□□ 2.67
SEMA3C-209ENST00000487621 TRPM4Q8TD43 1214 aa31.76■■■□□ 2.67
SEMA3C-209ENST00000487621 TRAF5O00463 557 aa31.75■■■□□ 2.67
SEMA3C-209ENST00000487621 UFL1O94874 794 aa31.75■■■□□ 2.67
SEMA3C-209ENST00000487621 CASP7P55210 303 aa31.75■■■□□ 2.67
SEMA3C-209ENST00000487621 GCKRQ14397 625 aa31.75■■■□□ 2.67
SEMA3C-209ENST00000487621 ANKIB1Q9P2G1 1089 aa31.75■■■□□ 2.67
SEMA3C-209ENST00000487621 GGA1Q9UJY5 639 aa31.75■■■□□ 2.67
SEMA3C-209ENST00000487621 FKBP5Q13451 457 aaPredicted RBP31.74■■■□□ 2.67
SEMA3C-209ENST00000487621 CST9Q5W186 159 aa31.74■■■□□ 2.67
SEMA3C-209ENST00000487621 UBE3BQ7Z3V4 1068 aa31.74■■■□□ 2.67
SEMA3C-209ENST00000487621 DNAAF4Q8WXU2 420 aa31.74■■■□□ 2.67
SEMA3C-209ENST00000487621 ZC3H12CQ9C0D7 883 aaKnown RBP31.74■■■□□ 2.67
SEMA3C-209ENST00000487621 GREM2Q9H772 168 aa31.74■■■□□ 2.67
SEMA3C-209ENST00000487621 MICALL2Q8IY33 904 aa31.73■■■□□ 2.67
SEMA3C-209ENST00000487621 ZC3H15Q8WU90 426 aaKnown RBP31.73■■■□□ 2.67
SEMA3C-209ENST00000487621 PLA2G12BQ9BX93 195 aa31.73■■■□□ 2.67
SEMA3C-209ENST00000487621 DEFB115Q30KQ5 88 aa31.72■■■□□ 2.67
SEMA3C-209ENST00000487621 CDC5LQ99459 802 aaKnown RBP31.72■■■□□ 2.67
SEMA3C-209ENST00000487621 XDHP47989 1333 aa31.72■■■□□ 2.67
SEMA3C-209ENST00000487621 LINS1Q8NG48 757 aa31.71■■■□□ 2.67
SEMA3C-209ENST00000487621 BSDC1Q9NW68 430 aaPredicted RBP31.71■■■□□ 2.67
SEMA3C-209ENST00000487621 H7C1D1 291 aa31.7■■■□□ 2.67
SEMA3C-209ENST00000487621 RPS12P25398 132 aaKnown RBP31.7■■■□□ 2.67
SEMA3C-209ENST00000487621 ZNF521Q96K83 1311 aa31.7■■■□□ 2.66
SEMA3C-209ENST00000487621 SCN9AQ15858 1988 aa31.69■■■□□ 2.66
SEMA3C-209ENST00000487621 VIL1P09327 827 aaKnown RBP31.69■■■□□ 2.66
SEMA3C-209ENST00000487621 GLIS2Q9BZE0 524 aaPredicted RBP31.69■■■□□ 2.66
SEMA3C-209ENST00000487621 MYH16Q9H6N6 1097 aa31.69■■■□□ 2.66
SEMA3C-209ENST00000487621 ABT1Q9ULW3 272 aaKnown RBP31.69■■■□□ 2.66
SEMA3C-209ENST00000487621 MINPP1Q9UNW1 487 aa31.69■■■□□ 2.66
SEMA3C-209ENST00000487621 CACNA1FO60840 1977 aa31.68■■■□□ 2.66
SEMA3C-209ENST00000487621 ATP2B4P23634 1241 aa31.68■■■□□ 2.66
SEMA3C-209ENST00000487621 SAMD7Q7Z3H4 446 aa31.68■■■□□ 2.66
SEMA3C-209ENST00000487621 MYH3P11055 1940 aa31.68■■■□□ 2.66
SEMA3C-209ENST00000487621 WTIPA6NIX2 430 aaPredicted RBP31.67■■■□□ 2.66
SEMA3C-209ENST00000487621 EGFRP00533 1210 aa31.67■■■□□ 2.66
SEMA3C-209ENST00000487621 CSF1RP07333 972 aa31.66■■■□□ 2.66
SEMA3C-209ENST00000487621 ZNF609O15014 1411 aa31.66■■■□□ 2.66
SEMA3C-209ENST00000487621 TRPM7Q96QT4 1865 aa31.65■■■□□ 2.66
SEMA3C-209ENST00000487621 TLL2Q9Y6L7 1015 aa31.65■■■□□ 2.66
SEMA3C-209ENST00000487621 WDR33Q9C0J8 1336 aaKnown RBP31.65■■■□□ 2.66
SEMA3C-209ENST00000487621 F6X3S4 739 aa31.64■■■□□ 2.66
SEMA3C-209ENST00000487621 FOXN1O15353 648 aa31.64■■■□□ 2.66
SEMA3C-209ENST00000487621 BEND3Q5T5X7 828 aa31.64■■■□□ 2.66
SEMA3C-209ENST00000487621 CDC37L1Q7L3B6 337 aa31.64■■■□□ 2.66
SEMA3C-209ENST00000487621 TBC1D10BQ4KMP7 808 aaPredicted RBP31.63■■■□□ 2.65
SEMA3C-209ENST00000487621 WBP1LQ9NX94 342 aa31.63■■■□□ 2.65
SEMA3C-209ENST00000487621 CELF2O95319 508 aaKnown RBP31.62■■■□□ 2.65
SEMA3C-209ENST00000487621 ITGA6P23229 1130 aa31.62■■■□□ 2.65
SEMA3C-209ENST00000487621 FAM161AQ3B820 660 aa31.62■■■□□ 2.65
SEMA3C-209ENST00000487621 MED23Q9ULK4 1368 aa31.61■■■□□ 2.65
SEMA3C-209ENST00000487621 G3V3G9 751 aa31.61■■■□□ 2.65
SEMA3C-209ENST00000487621 DCAF8Q5TAQ9 597 aa31.61■■■□□ 2.65
SEMA3C-209ENST00000487621 CCT4P50991 539 aaKnown RBP31.6■■■□□ 2.65
SEMA3C-209ENST00000487621 RSBN1LQ6PCB5 846 aaPredicted RBP31.6■■■□□ 2.65
SEMA3C-209ENST00000487621 PODNQ7Z5L7 613 aa31.6■■■□□ 2.65
SEMA3C-209ENST00000487621 IGHMBP2P38935 993 aaKnown RBP31.59■■■□□ 2.65
SEMA3C-209ENST00000487621 SAPCD2Q86UD0 394 aa31.59■■■□□ 2.65
SEMA3C-209ENST00000487621 GMLQ99445 158 aa31.59■■■□□ 2.65
SEMA3C-209ENST00000487621 SPEF2Q9C093 1822 aa31.59■■■□□ 2.65
SEMA3C-209ENST00000487621 THSD7BQ9C0I4 1608 aa31.58■■■□□ 2.65
SEMA3C-209ENST00000487621 CYP4F22Q6NT55 531 aa31.58■■■□□ 2.65
SEMA3C-209ENST00000487621 USP48Q86UV5 1035 aa31.58■■■□□ 2.65
SEMA3C-209ENST00000487621 AGBL3Q8NEM8 1001 aa31.58■■■□□ 2.65
SEMA3C-209ENST00000487621 CAPNS2Q96L46 248 aa31.58■■■□□ 2.65
SEMA3C-209ENST00000487621 PSME4Q14997 1843 aa31.57■■■□□ 2.64
SEMA3C-209ENST00000487621 ZNF280AP59817 542 aaPredicted RBP31.57■■■□□ 2.64
SEMA3C-209ENST00000487621 FOXO4P98177 505 aa31.57■■■□□ 2.64
SEMA3C-209ENST00000487621 KIF4BQ2VIQ3 1234 aa31.57■■■□□ 2.64
SEMA3C-209ENST00000487621 RBM26Q5T8P6 1007 aaKnown RBP31.57■■■□□ 2.64
SEMA3C-209ENST00000487621 DLK2Q6UY11 383 aa31.57■■■□□ 2.64
SEMA3C-209ENST00000487621 TNS4Q8IZW8 715 aa31.56■■■□□ 2.64
SEMA3C-209ENST00000487621 LEMD3Q9Y2U8 911 aa31.56■■■□□ 2.64
SEMA3C-209ENST00000487621 ECE1P42892 770 aa31.55■■■□□ 2.64
SEMA3C-209ENST00000487621 TXNRD3Q86VQ6 643 aa31.55■■■□□ 2.64
SEMA3C-209ENST00000487621 HHIPL1Q96JK4 782 aa31.55■■■□□ 2.64
SEMA3C-209ENST00000487621 USP17L3A6NCW0 530 aa31.54■■■□□ 2.64
SEMA3C-209ENST00000487621 USP17L4A6NCW7 530 aa31.54■■■□□ 2.64
SEMA3C-209ENST00000487621 USP17L1Q7RTZ2 530 aa31.54■■■□□ 2.64
SEMA3C-209ENST00000487621 EPHA10Q5JZY3 1008 aa31.53■■■□□ 2.64
SEMA3C-209ENST00000487621 KRT26Q7Z3Y9 468 aa31.53■■■□□ 2.64
SEMA3C-209ENST00000487621 AIDAQ96BJ3 306 aa31.53■■■□□ 2.64
SEMA3C-209ENST00000487621 MPHOSPH8Q99549 860 aa31.53■■■□□ 2.64
SEMA3C-209ENST00000487621 ZNF408Q9H9D4 720 aa31.53■■■□□ 2.64
SEMA3C-209ENST00000487621 ASTN2O75129 1339 aaPredicted RBP31.52■■■□□ 2.64
SEMA3C-209ENST00000487621 CTCFP49711 727 aaPredicted RBP31.52■■■□□ 2.64
SEMA3C-209ENST00000487621 MAP2K1Q02750 393 aaPredicted RBP31.52■■■□□ 2.64
SEMA3C-209ENST00000487621 ANKRD2Q9GZV1 360 aa31.52■■■□□ 2.64
SEMA3C-209ENST00000487621 PRDM10Q9NQV6 1147 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms