RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 TLL2Q9Y6L7 1015 aa15.71■□□□□ 0.11
VPS16-208ENST00000487461 LRRC37AA6NMS7 1700 aa15.71■□□□□ 0.1
VPS16-208ENST00000487461 CELF2O95319 508 aaKnown RBP15.7■□□□□ 0.1
VPS16-208ENST00000487461 CYP4F22Q6NT55 531 aa15.7■□□□□ 0.1
VPS16-208ENST00000487461 G2E3Q7L622 706 aa15.7■□□□□ 0.1
VPS16-208ENST00000487461 SAMD7Q7Z3H4 446 aa15.7■□□□□ 0.1
VPS16-208ENST00000487461 CAPNS2Q96L46 248 aa15.7■□□□□ 0.1
VPS16-208ENST00000487461 ZC3H12CQ9C0D7 883 aaKnown RBP15.7■□□□□ 0.1
VPS16-208ENST00000487461 PRDM10Q9NQV6 1147 aa15.7■□□□□ 0.1
VPS16-208ENST00000487461 TWISTNBQ3B726 338 aaPredicted RBP15.69■□□□□ 0.1
VPS16-208ENST00000487461 CDC37L1Q7L3B6 337 aa15.69■□□□□ 0.1
VPS16-208ENST00000487461 STK31Q9BXU1 1019 aa15.69■□□□□ 0.1
VPS16-208ENST00000487461 ANKIB1Q9P2G1 1089 aa15.69■□□□□ 0.1
VPS16-208ENST00000487461 RTL9Q8NET4 1388 aa15.68■□□□□ 0.1
VPS16-208ENST00000487461 UFL1O94874 794 aa15.68■□□□□ 0.1
VPS16-208ENST00000487461 SLC4A2P04920 1241 aa15.68■□□□□ 0.1
VPS16-208ENST00000487461 LBX1P52954 281 aa15.68■□□□□ 0.1
VPS16-208ENST00000487461 MAP2K1Q02750 393 aaPredicted RBP15.68■□□□□ 0.1
VPS16-208ENST00000487461 TBC1D10BQ4KMP7 808 aaPredicted RBP15.68■□□□□ 0.1
VPS16-208ENST00000487461 DLK2Q6UY11 383 aa15.68■□□□□ 0.1
VPS16-208ENST00000487461 PAXIP1Q6ZW49 1069 aaPredicted RBP15.68■□□□□ 0.1
VPS16-208ENST00000487461 SAPCD2Q86UD0 394 aa15.68■□□□□ 0.1
VPS16-208ENST00000487461 USP48Q86UV5 1035 aa15.68■□□□□ 0.1
VPS16-208ENST00000487461 MRS2Q9HD23 443 aa15.68■□□□□ 0.1
VPS16-208ENST00000487461 GGA1Q9UJY5 639 aa15.68■□□□□ 0.1
VPS16-208ENST00000487461 IL16Q14005 1332 aa15.68■□□□□ 0.1
VPS16-208ENST00000487461 EGFRP00533 1210 aa15.67■□□□□ 0.1
VPS16-208ENST00000487461 VIL1P09327 827 aaKnown RBP15.67■□□□□ 0.1
VPS16-208ENST00000487461 ECE1P42892 770 aa15.67■□□□□ 0.1
VPS16-208ENST00000487461 CTSWP56202 376 aa15.67■□□□□ 0.1
VPS16-208ENST00000487461 GRM1Q13255 1194 aa15.67■□□□□ 0.1
VPS16-208ENST00000487461 CWF19L2Q2TBE0 894 aaKnown RBP15.67■□□□□ 0.1
VPS16-208ENST00000487461 NCBP3Q53F19 620 aaKnown RBP15.67■□□□□ 0.1
VPS16-208ENST00000487461 RBM26Q5T8P6 1007 aaKnown RBP15.67■□□□□ 0.1
VPS16-208ENST00000487461 ANKRD18AQ8IVF6 992 aa15.67■□□□□ 0.1
VPS16-208ENST00000487461 TTLL11Q8NHH1 800 aa15.67■□□□□ 0.1
VPS16-208ENST00000487461 WTIPA6NIX2 430 aaPredicted RBP15.66■□□□□ 0.1
VPS16-208ENST00000487461 NEURL1BA8MQ27 555 aa15.66■□□□□ 0.1
VPS16-208ENST00000487461 G3V3G9 751 aa15.66■□□□□ 0.1
VPS16-208ENST00000487461 H7C1W4 665 aa15.66■□□□□ 0.1
VPS16-208ENST00000487461 HSPA8P11142 646 aaKnown RBP15.66■□□□□ 0.1
VPS16-208ENST00000487461 RPS12P25398 132 aaKnown RBP15.66■□□□□ 0.1
VPS16-208ENST00000487461 NEXNQ0ZGT2 675 aa15.66■□□□□ 0.1
VPS16-208ENST00000487461 DCAF8Q5TAQ9 597 aa15.66■□□□□ 0.1
VPS16-208ENST00000487461 ZNF408Q9H9D4 720 aa15.66■□□□□ 0.1
VPS16-208ENST00000487461 SALL2Q9Y467 1007 aaPredicted RBP15.66■□□□□ 0.1
VPS16-208ENST00000487461 TRPM7Q96QT4 1865 aa15.65■□□□□ 0.1
VPS16-208ENST00000487461 AOC2O75106 756 aa15.65■□□□□ 0.1
VPS16-208ENST00000487461 ZEB1P37275 1124 aaPredicted RBP15.65■□□□□ 0.1
VPS16-208ENST00000487461 GREM2Q9H772 168 aa15.65■□□□□ 0.1
VPS16-208ENST00000487461 XDHP47989 1333 aa15.65■□□□□ 0.1
VPS16-208ENST00000487461 ZNF316A6NFI3 1004 aaPredicted RBP15.64■□□□□ 0.09
VPS16-208ENST00000487461 ANP32CO43423 234 aa15.64■□□□□ 0.09
VPS16-208ENST00000487461 VAMP4O75379 141 aa15.64■□□□□ 0.09
VPS16-208ENST00000487461 ATP2B4P23634 1241 aa15.64■□□□□ 0.09
VPS16-208ENST00000487461 CDC5LQ99459 802 aaKnown RBP15.64■□□□□ 0.09
VPS16-208ENST00000487461 BSDC1Q9NW68 430 aaPredicted RBP15.64■□□□□ 0.09
VPS16-208ENST00000487461 MINPP1Q9UNW1 487 aa15.64■□□□□ 0.09
VPS16-208ENST00000487461 MAP2K2P36507 400 aa15.63■□□□□ 0.09
VPS16-208ENST00000487461 FLIIQ13045 1269 aa15.63■□□□□ 0.09
VPS16-208ENST00000487461 UBE3BQ7Z3V4 1068 aa15.63■□□□□ 0.09
VPS16-208ENST00000487461 KRT26Q7Z3Y9 468 aa15.63■□□□□ 0.09
VPS16-208ENST00000487461 WDR63Q8IWG1 891 aa15.63■□□□□ 0.09
VPS16-208ENST00000487461 HHIPL1Q96JK4 782 aa15.63■□□□□ 0.09
VPS16-208ENST00000487461 FANCIQ9NVI1 1328 aa15.63■□□□□ 0.09
VPS16-208ENST00000487461 GCKRQ14397 625 aa15.62■□□□□ 0.09
VPS16-208ENST00000487461 KIF4BQ2VIQ3 1234 aa15.62■□□□□ 0.09
VPS16-208ENST00000487461 RSBN1LQ6PCB5 846 aaPredicted RBP15.62■□□□□ 0.09
VPS16-208ENST00000487461 DCPSQ96C86 337 aaKnown RBP15.62■□□□□ 0.09
VPS16-208ENST00000487461 ADM5C9JUS6 153 aa15.61■□□□□ 0.09
VPS16-208ENST00000487461 CASP7P55210 303 aa15.61■□□□□ 0.09
VPS16-208ENST00000487461 ZNF280AP59817 542 aaPredicted RBP15.61■□□□□ 0.09
VPS16-208ENST00000487461 EXOSC9Q06265 439 aaKnown RBP15.61■□□□□ 0.09
VPS16-208ENST00000487461 AGBL3Q8NEM8 1001 aa15.61■□□□□ 0.09
VPS16-208ENST00000487461 DNAAF4Q8WXU2 420 aa15.61■□□□□ 0.09
VPS16-208ENST00000487461 GMLQ99445 158 aa15.61■□□□□ 0.09
VPS16-208ENST00000487461 PLA2G12BQ9BX93 195 aa15.61■□□□□ 0.09
VPS16-208ENST00000487461 SPINK5Q9NQ38 1064 aaPredicted RBP15.61■□□□□ 0.09
VPS16-208ENST00000487461 SCN9AQ15858 1988 aa15.61■□□□□ 0.09
VPS16-208ENST00000487461 ASTN2O75129 1339 aaPredicted RBP15.61■□□□□ 0.09
VPS16-208ENST00000487461 FKBP5Q13451 457 aaPredicted RBP15.6■□□□□ 0.09
VPS16-208ENST00000487461 PODNQ7Z5L7 613 aa15.6■□□□□ 0.09
VPS16-208ENST00000487461 BEGAINQ9BUH8 593 aa15.6■□□□□ 0.09
VPS16-208ENST00000487461 POLR2AP24928 1970 aaKnown RBP15.6■□□□□ 0.09
VPS16-208ENST00000487461 USP17L3A6NCW0 530 aa15.59■□□□□ 0.09
VPS16-208ENST00000487461 USP17L4A6NCW7 530 aa15.59■□□□□ 0.09
VPS16-208ENST00000487461 CSF1RP07333 972 aa15.59■□□□□ 0.09
VPS16-208ENST00000487461 CCT4P50991 539 aaKnown RBP15.59■□□□□ 0.09
VPS16-208ENST00000487461 HUNKP57058 714 aa15.59■□□□□ 0.09
VPS16-208ENST00000487461 SCARF1Q14162 830 aa15.59■□□□□ 0.09
VPS16-208ENST00000487461 USP17L1Q7RTZ2 530 aa15.59■□□□□ 0.09
VPS16-208ENST00000487461 LINS1Q8NG48 757 aa15.59■□□□□ 0.09
VPS16-208ENST00000487461 ZIC5Q96T25 663 aa15.59■□□□□ 0.09
VPS16-208ENST00000487461 TSKSQ9UJT2 592 aa15.59■□□□□ 0.09
VPS16-208ENST00000487461 USP17L8P0C7I0 530 aa15.58■□□□□ 0.08
VPS16-208ENST00000487461 ITGA6P23229 1130 aa15.58■□□□□ 0.08
VPS16-208ENST00000487461 IGHMBP2P38935 993 aaKnown RBP15.58■□□□□ 0.08
VPS16-208ENST00000487461 TXNRD3Q86VQ6 643 aa15.58■□□□□ 0.08
VPS16-208ENST00000487461 GBA2Q9HCG7 927 aaPredicted RBP15.58■□□□□ 0.08
VPS16-208ENST00000487461 GGA3Q9NZ52 723 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms