RNA–Protein interactions for RNA: ENST00000487300.1

SRM-205, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-205ENST00000487300 C6orf229H3BNL8 230 aa28.63■■■□□ 2.17
SRM-205ENST00000487300 UBE3BQ7Z3V4 1068 aa28.63■■■□□ 2.17
SRM-205ENST00000487300 CCDC85AQ96PX6 553 aaPredicted RBP28.63■■■□□ 2.17
SRM-205ENST00000487300 EYA3Q99504 573 aa28.63■■■□□ 2.17
SRM-205ENST00000487300 CNTNAP1P78357 1384 aa28.62■■■□□ 2.17
SRM-205ENST00000487300 ANKRD18AQ8IVF6 992 aa28.62■■■□□ 2.17
SRM-205ENST00000487300 GREM2Q9H772 168 aa28.62■■■□□ 2.17
SRM-205ENST00000487300 THSD7BQ9C0I4 1608 aa28.61■■■□□ 2.17
SRM-205ENST00000487300 CDC5LQ99459 802 aaKnown RBP28.61■■■□□ 2.17
SRM-205ENST00000487300 DBNDD1Q9H9R9 158 aa28.61■■■□□ 2.17
SRM-205ENST00000487300 TMEM88BA6NKF7 163 aa28.6■■■□□ 2.17
SRM-205ENST00000487300 ECE2O60344 883 aa28.6■■■□□ 2.17
SRM-205ENST00000487300 GPR101Q96P66 508 aaPredicted RBP28.6■■■□□ 2.17
SRM-205ENST00000487300 XDHP47989 1333 aa28.6■■■□□ 2.17
SRM-205ENST00000487300 RIMBP2O15034 1052 aa28.59■■■□□ 2.17
SRM-205ENST00000487300 UFL1O94874 794 aa28.59■■■□□ 2.17
SRM-205ENST00000487300 PGAP2Q9UHJ9 254 aa28.59■■■□□ 2.17
SRM-205ENST00000487300 GGA1Q9UJY5 639 aa28.59■■■□□ 2.17
SRM-205ENST00000487300 DPF2Q92785 391 aa28.58■■■□□ 2.17
SRM-205ENST00000487300 BSDC1Q9NW68 430 aaPredicted RBP28.58■■■□□ 2.17
SRM-205ENST00000487300 ANKIB1Q9P2G1 1089 aa28.58■■■□□ 2.17
SRM-205ENST00000487300 POLR2AP24928 1970 aaKnown RBP28.57■■■□□ 2.16
SRM-205ENST00000487300 PSMD14O00487 310 aa28.57■■■□□ 2.16
SRM-205ENST00000487300 CSF1RP07333 972 aa28.57■■■□□ 2.16
SRM-205ENST00000487300 BEND3Q5T5X7 828 aa28.57■■■□□ 2.16
SRM-205ENST00000487300 BCL2L13Q9BXK5 485 aa28.56■■■□□ 2.16
SRM-205ENST00000487300 ZC3H12CQ9C0D7 883 aaKnown RBP28.56■■■□□ 2.16
SRM-205ENST00000487300 F6X3S4 739 aa28.55■■■□□ 2.16
SRM-205ENST00000487300 HIRAP54198 1017 aaPredicted RBP28.55■■■□□ 2.16
SRM-205ENST00000487300 DOK7Q18PE1 504 aa28.55■■■□□ 2.16
SRM-205ENST00000487300 KCNQ5Q9NR82 932 aa28.55■■■□□ 2.16
SRM-205ENST00000487300 MKRN1Q9UHC7 482 aaKnown RBP28.55■■■□□ 2.16
SRM-205ENST00000487300 MED23Q9ULK4 1368 aa28.54■■■□□ 2.16
SRM-205ENST00000487300 SHTN1A0MZ66 631 aa28.54■■■□□ 2.16
SRM-205ENST00000487300 RPS12P25398 132 aaKnown RBP28.54■■■□□ 2.16
SRM-205ENST00000487300 TRPM4Q8TD43 1214 aa28.54■■■□□ 2.16
SRM-205ENST00000487300 ZC3H15Q8WU90 426 aaKnown RBP28.54■■■□□ 2.16
SRM-205ENST00000487300 CNOT7Q9UIV1 285 aaKnown RBP28.54■■■□□ 2.16
SRM-205ENST00000487300 MINPP1Q9UNW1 487 aa28.54■■■□□ 2.16
SRM-205ENST00000487300 ZBTB12Q9Y330 459 aaPredicted RBP28.54■■■□□ 2.16
SRM-205ENST00000487300 RASSF10A6NK89 507 aa28.53■■■□□ 2.16
SRM-205ENST00000487300 FAM161AQ3B820 660 aa28.53■■■□□ 2.16
SRM-205ENST00000487300 MICALL2Q8IY33 904 aa28.53■■■□□ 2.16
SRM-205ENST00000487300 ATP2B4P23634 1241 aa28.52■■■□□ 2.16
SRM-205ENST00000487300 VIL1P09327 827 aaKnown RBP28.51■■■□□ 2.15
SRM-205ENST00000487300 FMR1Q06787 632 aaKnown RBP eCLIP28.51■■■□□ 2.15
SRM-205ENST00000487300 ITGA6P23229 1130 aa28.5■■■□□ 2.15
SRM-205ENST00000487300 WTIPA6NIX2 430 aaPredicted RBP28.49■■■□□ 2.15
SRM-205ENST00000487300 E9PSI1 815 aa28.49■■■□□ 2.15
SRM-205ENST00000487300 H7C1D1 291 aa28.49■■■□□ 2.15
SRM-205ENST00000487300 TRAF5O00463 557 aa28.49■■■□□ 2.15
SRM-205ENST00000487300 FOXO4P98177 505 aa28.49■■■□□ 2.15
SRM-205ENST00000487300 CCER2I3L3R5 266 aa28.48■■■□□ 2.15
SRM-205ENST00000487300 HSPA1AP0DMV8 641 aaKnown RBP28.48■■■□□ 2.15
SRM-205ENST00000487300 HSPA1BP0DMV9 641 aaKnown RBP28.48■■■□□ 2.15
SRM-205ENST00000487300 CCT4P50991 539 aaKnown RBP28.48■■■□□ 2.15
SRM-205ENST00000487300 CST9Q5W186 159 aa28.48■■■□□ 2.15
SRM-205ENST00000487300 EGFRP00533 1210 aa28.47■■■□□ 2.15
SRM-205ENST00000487300 IGHMBP2P38935 993 aaKnown RBP28.47■■■□□ 2.15
SRM-205ENST00000487300 VEGFBP49765 207 aa28.47■■■□□ 2.15
SRM-205ENST00000487300 SLFN5Q08AF3 891 aa28.47■■■□□ 2.15
SRM-205ENST00000487300 GRM8O00222 908 aa28.46■■■□□ 2.15
SRM-205ENST00000487300 ALDH1L1O75891 902 aa28.46■■■□□ 2.15
SRM-205ENST00000487300 PODNQ7Z5L7 613 aa28.46■■■□□ 2.15
SRM-205ENST00000487300 IFFO2Q5TF58 517 aa28.45■■■□□ 2.14
SRM-205ENST00000487300 SAMD7Q7Z3H4 446 aa28.45■■■□□ 2.14
SRM-205ENST00000487300 GMLQ99445 158 aa28.45■■■□□ 2.14
SRM-205ENST00000487300 GLIS2Q9BZE0 524 aaPredicted RBP28.45■■■□□ 2.14
SRM-205ENST00000487300 LEMD3Q9Y2U8 911 aa28.45■■■□□ 2.14
SRM-205ENST00000487300 MRPL50Q8N5N7 158 aaKnown RBP28.44■■■□□ 2.14
SRM-205ENST00000487300 AGBL3Q8NEM8 1001 aa28.44■■■□□ 2.14
SRM-205ENST00000487300 DEFB115Q30KQ5 88 aa28.43■■■□□ 2.14
SRM-205ENST00000487300 RSBN1LQ6PCB5 846 aaPredicted RBP28.43■■■□□ 2.14
SRM-205ENST00000487300 TRMT2AQ8IZ69 625 aaKnown RBP28.43■■■□□ 2.14
SRM-205ENST00000487300 G3V3G9 751 aa28.42■■■□□ 2.14
SRM-205ENST00000487300 ZNF280AP59817 542 aaPredicted RBP28.42■■■□□ 2.14
SRM-205ENST00000487300 TBC1D10BQ4KMP7 808 aaPredicted RBP28.42■■■□□ 2.14
SRM-205ENST00000487300 EPHA10Q5JZY3 1008 aa28.42■■■□□ 2.14
SRM-205ENST00000487300 DCAF8Q5TAQ9 597 aa28.42■■■□□ 2.14
SRM-205ENST00000487300 CDC37L1Q7L3B6 337 aa28.42■■■□□ 2.14
SRM-205ENST00000487300 SRCIN1Q9C0H9 1055 aa28.42■■■□□ 2.14
SRM-205ENST00000487300 ANKRD2Q9GZV1 360 aa28.42■■■□□ 2.14
SRM-205ENST00000487300 UTYO14607 1347 aa28.42■■■□□ 2.14
SRM-205ENST00000487300 IRS2Q9Y4H2 1338 aa28.42■■■□□ 2.14
SRM-205ENST00000487300 ANKRD18BA2A2Z9 1011 aa28.41■■■□□ 2.14
SRM-205ENST00000487300 TXNRD3Q86VQ6 643 aa28.41■■■□□ 2.14
SRM-205ENST00000487300 MPHOSPH8Q99549 860 aa28.41■■■□□ 2.14
SRM-205ENST00000487300 ABT1Q9ULW3 272 aaKnown RBP28.41■■■□□ 2.14
SRM-205ENST00000487300 TLL2Q9Y6L7 1015 aa28.41■■■□□ 2.14
SRM-205ENST00000487300 ZNF804BA4D1E1 1349 aa28.41■■■□□ 2.14
SRM-205ENST00000487300 PTPRCP08575 1304 aa28.41■■■□□ 2.14
SRM-205ENST00000487300 ECM29Q5VYK3 1845 aa28.39■■■□□ 2.14
SRM-205ENST00000487300 USP17L3A6NCW0 530 aa28.39■■■□□ 2.14
SRM-205ENST00000487300 USP17L4A6NCW7 530 aa28.39■■■□□ 2.14
SRM-205ENST00000487300 CHRNDQ07001 517 aa28.39■■■□□ 2.14
SRM-205ENST00000487300 IFIT5Q13325 482 aaKnown RBP28.39■■■□□ 2.14
SRM-205ENST00000487300 KIF4BQ2VIQ3 1234 aa28.39■■■□□ 2.14
SRM-205ENST00000487300 LMBR1LQ6UX01 489 aa28.39■■■□□ 2.14
SRM-205ENST00000487300 USP17L1Q7RTZ2 530 aa28.39■■■□□ 2.14
SRM-205ENST00000487300 SSH1Q8WYL5 1049 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms