RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 DOK7Q18PE1 504 aa20.15■□□□□ 0.82
GABPA-203ENST00000487266 LDHDQ86WU2 507 aa20.15■□□□□ 0.82
GABPA-203ENST00000487266 CDC5LQ99459 802 aaKnown RBP20.15■□□□□ 0.82
GABPA-203ENST00000487266 ITGA6P23229 1130 aa20.14■□□□□ 0.81
GABPA-203ENST00000487266 GMPSP49915 693 aaPredicted RBP20.14■□□□□ 0.81
GABPA-203ENST00000487266 CIAPIN1Q6FI81 312 aa20.14■□□□□ 0.81
GABPA-203ENST00000487266 TRMT2AQ8IZ69 625 aaKnown RBP20.14■□□□□ 0.81
GABPA-203ENST00000487266 PODXL2Q9NZ53 605 aa20.14■□□□□ 0.81
GABPA-203ENST00000487266 SHTN1A0MZ66 631 aa20.13■□□□□ 0.81
GABPA-203ENST00000487266 LMOD1P29536 600 aaPredicted RBP20.13■□□□□ 0.81
GABPA-203ENST00000487266 EPHA10Q5JZY3 1008 aa20.13■□□□□ 0.81
GABPA-203ENST00000487266 KCNQ5Q9NR82 932 aa20.13■□□□□ 0.81
GABPA-203ENST00000487266 GGA1Q9UJY5 639 aa20.13■□□□□ 0.81
GABPA-203ENST00000487266 CLEC11AQ9Y240 323 aa20.13■□□□□ 0.81
GABPA-203ENST00000487266 XDHP47989 1333 aa20.12■□□□□ 0.81
GABPA-203ENST00000487266 GRM8O00222 908 aa20.12■□□□□ 0.81
GABPA-203ENST00000487266 ECE2O60344 883 aa20.12■□□□□ 0.81
GABPA-203ENST00000487266 FOXO4P98177 505 aa20.12■□□□□ 0.81
GABPA-203ENST00000487266 MAP1SQ66K74 1059 aaPredicted RBP20.12■□□□□ 0.81
GABPA-203ENST00000487266 DNAJC5GQ8N7S2 189 aa20.12■□□□□ 0.81
GABPA-203ENST00000487266 EYA3Q99504 573 aa20.12■□□□□ 0.81
GABPA-203ENST00000487266 GPRC5DQ9NZD1 345 aa20.12■□□□□ 0.81
GABPA-203ENST00000487266 PSME4Q14997 1843 aa20.11■□□□□ 0.81
GABPA-203ENST00000487266 CSF1RP07333 972 aa20.11■□□□□ 0.81
GABPA-203ENST00000487266 SRCIN1Q9C0H9 1055 aa20.11■□□□□ 0.81
GABPA-203ENST00000487266 BSDC1Q9NW68 430 aaPredicted RBP20.11■□□□□ 0.81
GABPA-203ENST00000487266 MINPP1Q9UNW1 487 aa20.11■□□□□ 0.81
GABPA-203ENST00000487266 ZBTB12Q9Y330 459 aaPredicted RBP20.11■□□□□ 0.81
GABPA-203ENST00000487266 CHMP3Q9Y3E7 222 aa20.11■□□□□ 0.81
GABPA-203ENST00000487266 PSMD14O00487 310 aa20.1■□□□□ 0.81
GABPA-203ENST00000487266 ALDH1L1O75891 902 aa20.1■□□□□ 0.81
GABPA-203ENST00000487266 PNMA8AQ86V59 439 aaPredicted RBP20.1■□□□□ 0.81
GABPA-203ENST00000487266 SMC4Q9NTJ3 1288 aa20.1■□□□□ 0.81
GABPA-203ENST00000487266 ZNF646O15015 1829 aaPredicted RBP20.09■□□□□ 0.81
GABPA-203ENST00000487266 PASKQ96RG2 1323 aa20.09■□□□□ 0.81
GABPA-203ENST00000487266 NBPF7P0C2Y1 421 aaPredicted RBP20.09■□□□□ 0.81
GABPA-203ENST00000487266 IGHMBP2P38935 993 aaKnown RBP20.09■□□□□ 0.81
GABPA-203ENST00000487266 ZC3H12CQ9C0D7 883 aaKnown RBP20.09■□□□□ 0.81
GABPA-203ENST00000487266 C9orf78Q9NZ63 289 aaPredicted RBP20.09■□□□□ 0.81
GABPA-203ENST00000487266 PTPRCP08575 1304 aa20.08■□□□□ 0.81
GABPA-203ENST00000487266 ITGBL1O95965 494 aaPredicted RBP20.08■□□□□ 0.81
GABPA-203ENST00000487266 TNIP1Q15025 636 aa20.08■□□□□ 0.81
GABPA-203ENST00000487266 LMBR1LQ6UX01 489 aa20.08■□□□□ 0.81
GABPA-203ENST00000487266 SUCLG2Q96I99 432 aa20.08■□□□□ 0.81
GABPA-203ENST00000487266 ATP2B4P23634 1241 aa20.07■□□□□ 0.8
GABPA-203ENST00000487266 KLRK1P26718 216 aa20.07■□□□□ 0.8
GABPA-203ENST00000487266 ALDH1L2Q3SY69 923 aa20.07■□□□□ 0.8
GABPA-203ENST00000487266 TRPM4Q8TD43 1214 aa20.07■□□□□ 0.8
GABPA-203ENST00000487266 KAZALD1Q96I82 304 aa20.07■□□□□ 0.8
GABPA-203ENST00000487266 ANKRD18BA2A2Z9 1011 aa20.06■□□□□ 0.8
GABPA-203ENST00000487266 CCT4P50991 539 aaKnown RBP20.06■□□□□ 0.8
GABPA-203ENST00000487266 FMR1Q06787 632 aaKnown RBP eCLIP20.06■□□□□ 0.8
GABPA-203ENST00000487266 MICALL2Q8IY33 904 aa20.06■□□□□ 0.8
GABPA-203ENST00000487266 CNTROBQ8N137 903 aa20.06■□□□□ 0.8
GABPA-203ENST00000487266 KLRG1Q96E93 195 aa20.06■□□□□ 0.8
GABPA-203ENST00000487266 ZNF594Q96JF6 807 aaPredicted RBP20.06■□□□□ 0.8
GABPA-203ENST00000487266 MPHOSPH8Q99549 860 aa20.06■□□□□ 0.8
GABPA-203ENST00000487266 ADARB2Q9NS39 739 aaKnown RBP20.06■□□□□ 0.8
GABPA-203ENST00000487266 PCNTO95613 3336 aa20.06■□□□□ 0.8
GABPA-203ENST00000487266 MED23Q9ULK4 1368 aa20.06■□□□□ 0.8
GABPA-203ENST00000487266 SNAP23O00161 211 aa20.05■□□□□ 0.8
GABPA-203ENST00000487266 CHRNDQ07001 517 aa20.05■□□□□ 0.8
GABPA-203ENST00000487266 IFIT5Q13325 482 aaKnown RBP20.05■□□□□ 0.8
GABPA-203ENST00000487266 USP50Q70EL3 339 aaPredicted RBP20.05■□□□□ 0.8
GABPA-203ENST00000487266 TXNRD3Q86VQ6 643 aa20.05■□□□□ 0.8
GABPA-203ENST00000487266 G3V3G9 751 aa20.04■□□□□ 0.8
GABPA-203ENST00000487266 EGFRP00533 1210 aa20.04■□□□□ 0.8
GABPA-203ENST00000487266 HIRAP54198 1017 aaPredicted RBP20.04■□□□□ 0.8
GABPA-203ENST00000487266 HNRNPUQ00839 825 aaKnown RBP eCLIP20.04■□□□□ 0.8
GABPA-203ENST00000487266 DCAF8Q5TAQ9 597 aa20.04■□□□□ 0.8
GABPA-203ENST00000487266 CNOT7Q9UIV1 285 aaKnown RBP20.04■□□□□ 0.8
GABPA-203ENST00000487266 UTYO14607 1347 aa20.03■□□□□ 0.8
GABPA-203ENST00000487266 TAF5LO75529 589 aa20.03■□□□□ 0.8
GABPA-203ENST00000487266 SAMD7Q7Z3H4 446 aa20.03■□□□□ 0.8
GABPA-203ENST00000487266 HELBQ8NG08 1087 aaPredicted RBP20.03■□□□□ 0.8
GABPA-203ENST00000487266 TRAF5O00463 557 aa20.02■□□□□ 0.8
GABPA-203ENST00000487266 BICC1Q9H694 974 aaKnown RBP20.02■□□□□ 0.8
GABPA-203ENST00000487266 CREBZFQ9NS37 354 aa20.02■□□□□ 0.8
GABPA-203ENST00000487266 NOB1Q9ULX3 412 aaKnown RBP20.02■□□□□ 0.8
GABPA-203ENST00000487266 TRPM7Q96QT4 1865 aa20.02■□□□□ 0.8
GABPA-203ENST00000487266 ZNF804BA4D1E1 1349 aa20.02■□□□□ 0.79
GABPA-203ENST00000487266 CT47B1P0C2W7 299 aaPredicted RBP20.01■□□□□ 0.79
GABPA-203ENST00000487266 CCDC57Q2TAC2 916 aa20.01■□□□□ 0.79
GABPA-203ENST00000487266 ANKRD44Q8N8A2 993 aa20.01■□□□□ 0.79
GABPA-203ENST00000487266 MKRN1Q9UHC7 482 aaKnown RBP20.01■□□□□ 0.79
GABPA-203ENST00000487266 VIL1P09327 827 aaKnown RBP20■□□□□ 0.79
GABPA-203ENST00000487266 RARSP54136 660 aaKnown RBP20■□□□□ 0.79
GABPA-203ENST00000487266 TBC1D10BQ4KMP7 808 aaPredicted RBP20■□□□□ 0.79
GABPA-203ENST00000487266 TAF7LQ5H9L4 462 aa20■□□□□ 0.79
GABPA-203ENST00000487266 MXD3Q9BW11 206 aa20■□□□□ 0.79
GABPA-203ENST00000487266 ANKRD2Q9GZV1 360 aa20■□□□□ 0.79
GABPA-203ENST00000487266 USP44Q9H0E7 712 aa20■□□□□ 0.79
GABPA-203ENST00000487266 LEMD3Q9Y2U8 911 aa20■□□□□ 0.79
GABPA-203ENST00000487266 POLR2AP24928 1970 aaKnown RBP19.99■□□□□ 0.79
GABPA-203ENST00000487266 H7C1D1 291 aa19.99■□□□□ 0.79
GABPA-203ENST00000487266 KCNJ4P48050 445 aa19.99■□□□□ 0.79
GABPA-203ENST00000487266 RBM26Q5T8P6 1007 aaKnown RBP19.99■□□□□ 0.79
GABPA-203ENST00000487266 DPF2Q92785 391 aa19.99■□□□□ 0.79
GABPA-203ENST00000487266 GLIS2Q9BZE0 524 aaPredicted RBP19.99■□□□□ 0.79
GABPA-203ENST00000487266 IRS2Q9Y4H2 1338 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms