RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 NSFL1CQ9UNZ2 370 aaKnown RBP12.89□□□□□ -0.35
NEK4-204ENST00000487068 PCNTO95613 3336 aa12.89□□□□□ -0.35
NEK4-204ENST00000487068 COL4A5P29400 1685 aa12.89□□□□□ -0.35
NEK4-204ENST00000487068 C6orf229H3BNL8 230 aa12.88□□□□□ -0.35
NEK4-204ENST00000487068 IGHMBP2P38935 993 aaKnown RBP12.88□□□□□ -0.35
NEK4-204ENST00000487068 TAF7LQ5H9L4 462 aa12.88□□□□□ -0.35
NEK4-204ENST00000487068 TTLL11Q8NHH1 800 aa12.88□□□□□ -0.35
NEK4-204ENST00000487068 RTL9Q8NET4 1388 aa12.87□□□□□ -0.35
NEK4-204ENST00000487068 ITGA6P23229 1130 aa12.87□□□□□ -0.35
NEK4-204ENST00000487068 EIF6P56537 245 aaKnown RBP12.87□□□□□ -0.35
NEK4-204ENST00000487068 MPHOSPH8Q99549 860 aa12.87□□□□□ -0.35
NEK4-204ENST00000487068 SCN9AQ15858 1988 aa12.87□□□□□ -0.35
NEK4-204ENST00000487068 ZNF541Q9H0D2 1346 aa12.87□□□□□ -0.35
NEK4-204ENST00000487068 ANKRD18BA2A2Z9 1011 aa12.86□□□□□ -0.35
NEK4-204ENST00000487068 POTECB2RU33 542 aa12.86□□□□□ -0.35
NEK4-204ENST00000487068 G3V3G9 751 aa12.86□□□□□ -0.35
NEK4-204ENST00000487068 UFL1O94874 794 aa12.86□□□□□ -0.35
NEK4-204ENST00000487068 CCT4P50991 539 aaKnown RBP12.86□□□□□ -0.35
NEK4-204ENST00000487068 CASP7P55210 303 aa12.86□□□□□ -0.35
NEK4-204ENST00000487068 GPSM2P81274 684 aa12.86□□□□□ -0.35
NEK4-204ENST00000487068 IFIT5Q13325 482 aaKnown RBP12.86□□□□□ -0.35
NEK4-204ENST00000487068 DCAF8Q5TAQ9 597 aa12.86□□□□□ -0.35
NEK4-204ENST00000487068 PLA2G12BQ9BX93 195 aa12.86□□□□□ -0.35
NEK4-204ENST00000487068 GJA3Q9Y6H8 435 aa12.86□□□□□ -0.35
NEK4-204ENST00000487068 RIMBP2O15034 1052 aa12.85□□□□□ -0.35
NEK4-204ENST00000487068 IPO8O15397 1037 aaKnown RBP12.85□□□□□ -0.35
NEK4-204ENST00000487068 BCAR3O75815 825 aa12.85□□□□□ -0.35
NEK4-204ENST00000487068 DDNO94850 711 aaPredicted RBP12.85□□□□□ -0.35
NEK4-204ENST00000487068 CCDC57Q2TAC2 916 aa12.85□□□□□ -0.35
NEK4-204ENST00000487068 LMBR1LQ6UX01 489 aa12.85□□□□□ -0.35
NEK4-204ENST00000487068 YTHDC1Q96MU7 727 aaKnown RBP12.85□□□□□ -0.35
NEK4-204ENST00000487068 EYA3Q99504 573 aa12.85□□□□□ -0.35
NEK4-204ENST00000487068 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
NEK4-204ENST00000487068 GGA1Q9UJY5 639 aa12.85□□□□□ -0.35
NEK4-204ENST00000487068 XDHP47989 1333 aa12.85□□□□□ -0.35
NEK4-204ENST00000487068 NBPF7P0C2Y1 421 aaPredicted RBP12.84□□□□□ -0.35
NEK4-204ENST00000487068 UBTFL1P0CB47 393 aaPredicted RBP12.84□□□□□ -0.35
NEK4-204ENST00000487068 WASHC4Q2M389 1173 aa12.84□□□□□ -0.35
NEK4-204ENST00000487068 CLUAP1Q96AJ1 413 aa12.84□□□□□ -0.35
NEK4-204ENST00000487068 SUCLG2Q96I99 432 aa12.84□□□□□ -0.35
NEK4-204ENST00000487068 GPR101Q96P66 508 aaPredicted RBP12.84□□□□□ -0.35
NEK4-204ENST00000487068 MKRN1Q9UHC7 482 aaKnown RBP12.84□□□□□ -0.35
NEK4-204ENST00000487068 KCNJ4P48050 445 aa12.83□□□□□ -0.36
NEK4-204ENST00000487068 FOXO4P98177 505 aa12.83□□□□□ -0.36
NEK4-204ENST00000487068 KIAA2012Q0VF49 1180 aa12.83□□□□□ -0.36
NEK4-204ENST00000487068 CHADLQ6NUI6 762 aa12.83□□□□□ -0.36
NEK4-204ENST00000487068 FTSJ3Q8IY81 847 aaKnown RBP12.83□□□□□ -0.36
NEK4-204ENST00000487068 RTFDC1Q9BY42 306 aaPredicted RBP12.83□□□□□ -0.36
NEK4-204ENST00000487068 BICC1Q9H694 974 aaKnown RBP12.83□□□□□ -0.36
NEK4-204ENST00000487068 FZD9O00144 591 aa12.82□□□□□ -0.36
NEK4-204ENST00000487068 CSF1RP07333 972 aa12.82□□□□□ -0.36
NEK4-204ENST00000487068 LMOD1P29536 600 aaPredicted RBP12.82□□□□□ -0.36
NEK4-204ENST00000487068 BRPF1P55201 1214 aaPredicted RBP12.82□□□□□ -0.36
NEK4-204ENST00000487068 EPHA10Q5JZY3 1008 aa12.82□□□□□ -0.36
NEK4-204ENST00000487068 ZKSCAN2Q63HK3 967 aa12.82□□□□□ -0.36
NEK4-204ENST00000487068 ATF7IPQ6VMQ6 1270 aa12.82□□□□□ -0.36
NEK4-204ENST00000487068 TBC1D16Q8TBP0 767 aa12.82□□□□□ -0.36
NEK4-204ENST00000487068 ZC3H12CQ9C0D7 883 aaKnown RBP12.82□□□□□ -0.36
NEK4-204ENST00000487068 VPS33BQ9H267 617 aa12.82□□□□□ -0.36
NEK4-204ENST00000487068 DBNDD1Q9H9R9 158 aa12.82□□□□□ -0.36
NEK4-204ENST00000487068 CNNM1Q9NRU3 951 aa12.82□□□□□ -0.36
NEK4-204ENST00000487068 BSDC1Q9NW68 430 aaPredicted RBP12.82□□□□□ -0.36
NEK4-204ENST00000487068 POLLQ9UGP5 575 aa12.82□□□□□ -0.36
NEK4-204ENST00000487068 ZNF646O15015 1829 aaPredicted RBP12.81□□□□□ -0.36
NEK4-204ENST00000487068 IQCA1LA6NCM1 817 aa12.81□□□□□ -0.36
NEK4-204ENST00000487068 ECE2O60344 883 aa12.81□□□□□ -0.36
NEK4-204ENST00000487068 TRIM27P14373 513 aa12.81□□□□□ -0.36
NEK4-204ENST00000487068 ATP2B4P23634 1241 aa12.81□□□□□ -0.36
NEK4-204ENST00000487068 GPC2Q8N158 579 aa12.81□□□□□ -0.36
NEK4-204ENST00000487068 ARHGAP45Q92619 1136 aa12.81□□□□□ -0.36
NEK4-204ENST00000487068 ZNRF3Q9ULT6 936 aa12.81□□□□□ -0.36
NEK4-204ENST00000487068 MINPP1Q9UNW1 487 aa12.81□□□□□ -0.36
NEK4-204ENST00000487068 UTYO14607 1347 aa12.81□□□□□ -0.36
NEK4-204ENST00000487068 CNTNAP1P78357 1384 aa12.81□□□□□ -0.36
NEK4-204ENST00000487068 ARAP2Q8WZ64 1704 aa12.8□□□□□ -0.36
NEK4-204ENST00000487068 POLR2AP24928 1970 aaKnown RBP12.8□□□□□ -0.36
NEK4-204ENST00000487068 PLIN1O60240 522 aa12.8□□□□□ -0.36
NEK4-204ENST00000487068 RAD17O75943 681 aa12.8□□□□□ -0.36
NEK4-204ENST00000487068 POTEIP0CG38 1075 aa12.8□□□□□ -0.36
NEK4-204ENST00000487068 POTEJP0CG39 1038 aa12.8□□□□□ -0.36
NEK4-204ENST00000487068 DOK7Q18PE1 504 aa12.8□□□□□ -0.36
NEK4-204ENST00000487068 EAPPQ56P03 285 aaPredicted RBP12.8□□□□□ -0.36
NEK4-204ENST00000487068 LDHAL6AQ6ZMR3 332 aa12.8□□□□□ -0.36
NEK4-204ENST00000487068 ZNF594Q96JF6 807 aaPredicted RBP12.8□□□□□ -0.36
NEK4-204ENST00000487068 ANKRD2Q9GZV1 360 aa12.8□□□□□ -0.36
NEK4-204ENST00000487068 USP44Q9H0E7 712 aa12.8□□□□□ -0.36
NEK4-204ENST00000487068 PODXL2Q9NZ53 605 aa12.8□□□□□ -0.36
NEK4-204ENST00000487068 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
NEK4-204ENST00000487068 HDAC5Q9UQL6 1122 aa12.8□□□□□ -0.36
NEK4-204ENST00000487068 TRPM7Q96QT4 1865 aa12.8□□□□□ -0.36
NEK4-204ENST00000487068 FOXN1O15353 648 aa12.79□□□□□ -0.36
NEK4-204ENST00000487068 CHRNDQ07001 517 aa12.79□□□□□ -0.36
NEK4-204ENST00000487068 CIAPIN1Q6FI81 312 aa12.79□□□□□ -0.36
NEK4-204ENST00000487068 FBXW7Q969H0 707 aa12.79□□□□□ -0.36
NEK4-204ENST00000487068 HACL1Q9UJ83 578 aa12.79□□□□□ -0.36
NEK4-204ENST00000487068 TNNQ9UQP3 1299 aa12.79□□□□□ -0.36
NEK4-204ENST00000487068 U3KPZ7 1027 aaPredicted RBP12.79□□□□□ -0.36
NEK4-204ENST00000487068 MED23Q9ULK4 1368 aa12.79□□□□□ -0.36
NEK4-204ENST00000487068 ECM29Q5VYK3 1845 aa12.78□□□□□ -0.36
NEK4-204ENST00000487068 TNIP1Q15025 636 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms