RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 DTWD1Q8N5C7 304 aa7.8□□□□□ -1.16
SNRNP40-205ENST00000486941 PLD4Q96BZ4 506 aa7.8□□□□□ -1.16
SNRNP40-205ENST00000486941 NSUN5Q96P11 429 aaKnown RBP7.8□□□□□ -1.16
SNRNP40-205ENST00000486941 PSMG3-AS1Q96PY0 264 aa7.8□□□□□ -1.16
SNRNP40-205ENST00000486941 TM4SF5O14894 197 aa7.79□□□□□ -1.16
SNRNP40-205ENST00000486941 ALX3O95076 343 aa7.79□□□□□ -1.16
SNRNP40-205ENST00000486941 HOXD8P13378 290 aaPredicted RBP7.79□□□□□ -1.16
SNRNP40-205ENST00000486941 EIF2AK2P19525 551 aaKnown RBP7.79□□□□□ -1.16
SNRNP40-205ENST00000486941 NAA30Q147X3 362 aaPredicted RBP7.79□□□□□ -1.16
SNRNP40-205ENST00000486941 SWI5Q1ZZU3 235 aa7.79□□□□□ -1.16
SNRNP40-205ENST00000486941 KRTAP9-6A0A140TA67 174 aa7.78□□□□□ -1.16
SNRNP40-205ENST00000486941 TMEM164Q5U3C3 297 aa7.78□□□□□ -1.16
SNRNP40-205ENST00000486941 IGF2-ASQ6U949 168 aa7.78□□□□□ -1.16
SNRNP40-205ENST00000486941 MKNK1Q9BUB5 465 aa7.78□□□□□ -1.16
SNRNP40-205ENST00000486941 CXXC1Q9P0U4 656 aaPredicted RBP7.78□□□□□ -1.16
SNRNP40-205ENST00000486941 TRIM33Q9UPN9 1127 aa7.78□□□□□ -1.16
SNRNP40-205ENST00000486941 SETDB1Q15047 1291 aa7.77□□□□□ -1.17
SNRNP40-205ENST00000486941 C16orf46Q6P387 395 aa7.77□□□□□ -1.17
SNRNP40-205ENST00000486941 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.77□□□□□ -1.17
SNRNP40-205ENST00000486941 SCO2A0A1W2PP80 73 aa7.76□□□□□ -1.17
SNRNP40-205ENST00000486941 GDF6Q6KF10 455 aaPredicted RBP7.76□□□□□ -1.17
SNRNP40-205ENST00000486941 ZFP64Q9NPA5 681 aa7.76□□□□□ -1.17
SNRNP40-205ENST00000486941 NCAPD3P42695 1498 aa7.75□□□□□ -1.17
SNRNP40-205ENST00000486941 HYAL3O43820 417 aaPredicted RBP7.75□□□□□ -1.17
SNRNP40-205ENST00000486941 PSAPP07602 524 aa7.75□□□□□ -1.17
SNRNP40-205ENST00000486941 SOX18P35713 384 aa7.75□□□□□ -1.17
SNRNP40-205ENST00000486941 NLRP13Q86W25 1043 aa7.75□□□□□ -1.17
SNRNP40-205ENST00000486941 DZIP1LQ8IYY4 767 aaKnown RBP7.75□□□□□ -1.17
SNRNP40-205ENST00000486941 IL22RA1Q8N6P7 574 aa7.75□□□□□ -1.17
SNRNP40-205ENST00000486941 COL26A1Q96A83 441 aa7.75□□□□□ -1.17
SNRNP40-205ENST00000486941 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.75□□□□□ -1.17
SNRNP40-205ENST00000486941 ATG7O95352 703 aa7.74□□□□□ -1.17
SNRNP40-205ENST00000486941 BRD2P25440 801 aaKnown RBP7.74□□□□□ -1.17
SNRNP40-205ENST00000486941 ATP11AP98196 1134 aa7.74□□□□□ -1.17
SNRNP40-205ENST00000486941 GALNT11Q8NCW6 608 aa7.74□□□□□ -1.17
SNRNP40-205ENST00000486941 F8W735 103 aaPredicted RBP7.73□□□□□ -1.17
SNRNP40-205ENST00000486941 CYP2E1P05181 493 aaPredicted RBP7.73□□□□□ -1.17
SNRNP40-205ENST00000486941 OR13H1Q8NG92 308 aa7.73□□□□□ -1.17
SNRNP40-205ENST00000486941 UBAP1LF5GYI3 381 aa7.72□□□□□ -1.17
SNRNP40-205ENST00000486941 SCNN1AP37088 669 aa7.72□□□□□ -1.17
SNRNP40-205ENST00000486941 PRR23CQ6ZRP0 262 aa7.72□□□□□ -1.17
SNRNP40-205ENST00000486941 AGGF1Q8N302 714 aaeCLIP7.72□□□□□ -1.17
SNRNP40-205ENST00000486941 TMEM130Q8N3G9 435 aa7.72□□□□□ -1.17
SNRNP40-205ENST00000486941 KCNK4Q9NYG8 393 aa7.72□□□□□ -1.17
SNRNP40-205ENST00000486941 SEPT3Q9UH03 358 aa7.72□□□□□ -1.17
SNRNP40-205ENST00000486941 CUX2O14529 1486 aa7.71□□□□□ -1.18
SNRNP40-205ENST00000486941 ZAP70P43403 619 aa7.71□□□□□ -1.18
SNRNP40-205ENST00000486941 LRP8Q14114 963 aa7.71□□□□□ -1.18
SNRNP40-205ENST00000486941 Q6ZS46 218 aa7.71□□□□□ -1.18
SNRNP40-205ENST00000486941 GPR152Q8TDT2 470 aa7.71□□□□□ -1.18
SNRNP40-205ENST00000486941 CLP1Q92989 425 aaKnown RBP7.71□□□□□ -1.18
SNRNP40-205ENST00000486941 AKTIPQ9H8T0 292 aa7.71□□□□□ -1.18
SNRNP40-205ENST00000486941 ATAD2BQ9ULI0 1458 aa7.7□□□□□ -1.18
SNRNP40-205ENST00000486941 WISP1O95388 367 aa7.7□□□□□ -1.18
SNRNP40-205ENST00000486941 GHRHP01286 108 aa7.7□□□□□ -1.18
SNRNP40-205ENST00000486941 SMARCA2P51531 1590 aa7.69□□□□□ -1.18
SNRNP40-205ENST00000486941 ARID4AP29374 1257 aaPredicted RBP7.69□□□□□ -1.18
SNRNP40-205ENST00000486941 TXNDC11Q6PKC3 985 aa7.69□□□□□ -1.18
SNRNP40-205ENST00000486941 ATCAYQ86WG3 371 aa7.69□□□□□ -1.18
SNRNP40-205ENST00000486941 UBL7Q96S82 380 aaPredicted RBP7.69□□□□□ -1.18
SNRNP40-205ENST00000486941 RASSF4Q9H2L5 321 aa7.69□□□□□ -1.18
SNRNP40-205ENST00000486941 STIM2Q9P246 746 aa7.69□□□□□ -1.18
SNRNP40-205ENST00000486941 ERCC6Q03468 1493 aa7.68□□□□□ -1.18
SNRNP40-205ENST00000486941 LINC01387J3KSC0 135 aa7.68□□□□□ -1.18
SNRNP40-205ENST00000486941 KIF4AO95239 1232 aa7.68□□□□□ -1.18
SNRNP40-205ENST00000486941 PIK3R5Q8WYR1 880 aa7.68□□□□□ -1.18
SNRNP40-205ENST00000486941 MRPL18Q9H0U6 180 aaKnown RBP7.68□□□□□ -1.18
SNRNP40-205ENST00000486941 TMEM63CQ9P1W3 806 aa7.68□□□□□ -1.18
SNRNP40-205ENST00000486941 CNTN3Q9P232 1028 aa7.68□□□□□ -1.18
SNRNP40-205ENST00000486941 HMGXB3Q12766 1538 aa7.68□□□□□ -1.18
SNRNP40-205ENST00000486941 SMARCA4P51532 1647 aa7.67□□□□□ -1.18
SNRNP40-205ENST00000486941 ACPPP15309 386 aa7.67□□□□□ -1.18
SNRNP40-205ENST00000486941 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.67□□□□□ -1.18
SNRNP40-205ENST00000486941 CEP120Q8N960 986 aa7.67□□□□□ -1.18
SNRNP40-205ENST00000486941 LACRTQ9GZZ8 138 aa7.67□□□□□ -1.18
SNRNP40-205ENST00000486941 RNF112Q9ULX5 631 aa7.67□□□□□ -1.18
SNRNP40-205ENST00000486941 PPME1Q9Y570 386 aa7.67□□□□□ -1.18
SNRNP40-205ENST00000486941 CDC25BP30305 580 aa7.66□□□□□ -1.18
SNRNP40-205ENST00000486941 CEP135Q66GS9 1140 aa7.66□□□□□ -1.18
SNRNP40-205ENST00000486941 POP1Q99575 1024 aaKnown RBP7.66□□□□□ -1.18
SNRNP40-205ENST00000486941 SH2B1Q9NRF2 756 aaPredicted RBP7.66□□□□□ -1.18
SNRNP40-205ENST00000486941 NFKBIEO00221 500 aa7.65□□□□□ -1.18
SNRNP40-205ENST00000486941 DDX3YO15523 660 aaKnown RBP7.65□□□□□ -1.18
SNRNP40-205ENST00000486941 PTCD1O75127 700 aaKnown RBP7.65□□□□□ -1.18
SNRNP40-205ENST00000486941 MED26O95402 600 aa7.65□□□□□ -1.18
SNRNP40-205ENST00000486941 EPHA1P21709 976 aa7.65□□□□□ -1.18
SNRNP40-205ENST00000486941 HYAL2Q12891 473 aa7.65□□□□□ -1.18
SNRNP40-205ENST00000486941 ARMC10Q8N2F6 343 aa7.65□□□□□ -1.18
SNRNP40-205ENST00000486941 KRTAP4-12Q9BQ66 201 aa7.65□□□□□ -1.18
SNRNP40-205ENST00000486941 CARD10Q9BWT7 1032 aa7.65□□□□□ -1.18
SNRNP40-205ENST00000486941 ZMYND15Q9H091 742 aa7.65□□□□□ -1.18
SNRNP40-205ENST00000486941 GGNBP2Q9H3C7 697 aa7.65□□□□□ -1.18
SNRNP40-205ENST00000486941 A6NHS1 94 aa7.64□□□□□ -1.19
SNRNP40-205ENST00000486941 ADAM11O75078 769 aa7.64□□□□□ -1.19
SNRNP40-205ENST00000486941 FSTP19883 344 aa7.64□□□□□ -1.19
SNRNP40-205ENST00000486941 KIAA1211Q6ZU35 1233 aa7.64□□□□□ -1.19
SNRNP40-205ENST00000486941 NUDT16Q96DE0 195 aaKnown RBP7.64□□□□□ -1.19
SNRNP40-205ENST00000486941 PBX4Q9BYU1 374 aa7.64□□□□□ -1.19
SNRNP40-205ENST00000486941 ABI2Q9NYB9 513 aaPredicted RBP7.64□□□□□ -1.19
SNRNP40-205ENST00000486941 BAZ1AQ9NRL2 1556 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms