RNA–Protein interactions for RNA: ENST00000486902.5

PDE9A-223, Transcript of phosphodiesterase 9A, human

TSL 2

Gene PDE9A, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE9A-223	ENST00000486902	SNRPA1	P09661	255 aa	Known RBP	12.18	□□□□□ -0.46
PDE9A-223	ENST00000486902	RBM27	Q9P2N5	1060 aa	Known RBP	12.18	□□□□□ -0.46
PDE9A-223	ENST00000486902	NTSR2	O95665	410 aa		12.17	□□□□□ -0.46
PDE9A-223	ENST00000486902	FKBP1B	P68106	108 aa		12.17	□□□□□ -0.46
PDE9A-223	ENST00000486902	NGEF	Q8N5V2	710 aa		12.17	□□□□□ -0.46
PDE9A-223	ENST00000486902	ARMC5	Q96C12	935 aa		12.17	□□□□□ -0.46
PDE9A-223	ENST00000486902	CFHR5	Q9BXR6	569 aa		12.17	□□□□□ -0.46
PDE9A-223	ENST00000486902	PANK3	Q9H999	370 aa		12.17	□□□□□ -0.46
PDE9A-223	ENST00000486902	DBNDD1	Q9H9R9	158 aa		12.17	□□□□□ -0.46
PDE9A-223	ENST00000486902	RTL9	Q8NET4	1388 aa		12.17	□□□□□ -0.46
PDE9A-223	ENST00000486902	ANGEL2	Q5VTE6	544 aa	Known RBP	12.16	□□□□□ -0.46
PDE9A-223	ENST00000486902	SP8	Q8IXZ3	490 aa		12.16	□□□□□ -0.46
PDE9A-223	ENST00000486902	KCNQ5	Q9NR82	932 aa		12.16	□□□□□ -0.46
PDE9A-223	ENST00000486902	SCAF8	Q9UPN6	1271 aa	Known RBP	12.16	□□□□□ -0.46
PDE9A-223	ENST00000486902	MAP3K15	Q6ZN16	1313 aa		12.15	□□□□□ -0.46
PDE9A-223	ENST00000486902	GALR2	O43603	387 aa	Predicted RBP	12.15	□□□□□ -0.46
PDE9A-223	ENST00000486902	RPS12	P25398	132 aa	Known RBP	12.15	□□□□□ -0.46
PDE9A-223	ENST00000486902	TTLL7	Q6ZT98	887 aa		12.15	□□□□□ -0.46
PDE9A-223	ENST00000486902	GAS2L2	Q8NHY3	880 aa		12.15	□□□□□ -0.46
PDE9A-223	ENST00000486902	PTPN22	Q9Y2R2	807 aa		12.15	□□□□□ -0.46
PDE9A-223	ENST00000486902	ERVV-1	B6SEH8	477 aa		12.14	□□□□□ -0.47
PDE9A-223	ENST00000486902	SREBF2	Q12772	1141 aa		12.14	□□□□□ -0.47
PDE9A-223	ENST00000486902	NLRP3	Q96P20	1036 aa		12.14	□□□□□ -0.47
PDE9A-223	ENST00000486902	ZBTB3	Q9H5J0	574 aa		12.14	□□□□□ -0.47
PDE9A-223	ENST00000486902	PITPNM2	Q9BZ72	1349 aa		12.13	□□□□□ -0.47
PDE9A-223	ENST00000486902	BBOX1	O75936	387 aa		12.13	□□□□□ -0.47
PDE9A-223	ENST00000486902	CENPB	P07199	599 aa	Predicted RBP	12.13	□□□□□ -0.47
PDE9A-223	ENST00000486902	SCARF1	Q14162	830 aa		12.13	□□□□□ -0.47
PDE9A-223	ENST00000486902	PRAMEF18	Q5VWM3	479 aa		12.13	□□□□□ -0.47
PDE9A-223	ENST00000486902	ZNF34	Q8IZ26	560 aa		12.13	□□□□□ -0.47
PDE9A-223	ENST00000486902	DCBLD2	Q96PD2	775 aa		12.13	□□□□□ -0.47
PDE9A-223	ENST00000486902	NUP98	P52948	1817 aa		12.13	□□□□□ -0.47
PDE9A-223	ENST00000486902	ZNF609	O15014	1411 aa		12.12	□□□□□ -0.47
PDE9A-223	ENST00000486902	RIMBP2	O15034	1052 aa		12.12	□□□□□ -0.47
PDE9A-223	ENST00000486902	ECE2	O60344	883 aa		12.12	□□□□□ -0.47
PDE9A-223	ENST00000486902	DIAPH1	O60610	1272 aa	Known RBP	12.12	□□□□□ -0.47
PDE9A-223	ENST00000486902	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.12	□□□□□ -0.47
PDE9A-223	ENST00000486902	CAP1	Q01518	475 aa		12.12	□□□□□ -0.47
PDE9A-223	ENST00000486902	DOK7	Q18PE1	504 aa		12.12	□□□□□ -0.47
PDE9A-223	ENST00000486902	CD99L2	Q8TCZ2	262 aa		12.12	□□□□□ -0.47
PDE9A-223	ENST00000486902	TMEM106C	Q9BVX2	250 aa		12.12	□□□□□ -0.47
PDE9A-223	ENST00000486902	SOX1	O00570	391 aa	Predicted RBP	12.11	□□□□□ -0.47
PDE9A-223	ENST00000486902	TTLL12	Q14166	644 aa	Predicted RBP	12.11	□□□□□ -0.47
PDE9A-223	ENST00000486902	WASHC4	Q2M389	1173 aa		12.11	□□□□□ -0.47
PDE9A-223	ENST00000486902	KIF6	Q6ZMV9	814 aa		12.11	□□□□□ -0.47
PDE9A-223	ENST00000486902	ZNF333	Q96JL9	665 aa		12.11	□□□□□ -0.47
PDE9A-223	ENST00000486902	GRAP	Q13588	217 aa		12.1	□□□□□ -0.47
PDE9A-223	ENST00000486902	GRAPL	Q8TC17	118 aa	Predicted RBP	12.1	□□□□□ -0.47
PDE9A-223	ENST00000486902	PRO3102	Q9H379	93 aa		12.1	□□□□□ -0.47
PDE9A-223	ENST00000486902	MYC	P01106	439 aa	Predicted RBP	12.09	□□□□□ -0.47
PDE9A-223	ENST00000486902	VIL1	P09327	827 aa	Known RBP	12.09	□□□□□ -0.47
PDE9A-223	ENST00000486902	HCLS1	P14317	486 aa	Predicted RBP	12.09	□□□□□ -0.47
PDE9A-223	ENST00000486902	ZNF280A	P59817	542 aa	Predicted RBP	12.09	□□□□□ -0.47
PDE9A-223	ENST00000486902	PTPN12	Q05209	780 aa	Known RBP	12.09	□□□□□ -0.47
PDE9A-223	ENST00000486902	SLC10A5	Q5PT55	438 aa		12.09	□□□□□ -0.47
PDE9A-223	ENST00000486902	PPP1R42	Q7Z4L9	355 aa		12.09	□□□□□ -0.47
PDE9A-223	ENST00000486902	ERO1A	Q96HE7	468 aa		12.09	□□□□□ -0.47
PDE9A-223	ENST00000486902	LRCH3	Q96II8	777 aa		12.09	□□□□□ -0.47
PDE9A-223	ENST00000486902	COL25A1	Q9BXS0	654 aa	Predicted RBP	12.09	□□□□□ -0.47
PDE9A-223	ENST00000486902	EFCC1	Q9HA90	598 aa		12.09	□□□□□ -0.47
PDE9A-223	ENST00000486902	FBXO3	Q9UK99	471 aa		12.09	□□□□□ -0.47
PDE9A-223	ENST00000486902	RRP7A	Q9Y3A4	280 aa	Known RBP	12.09	□□□□□ -0.47
PDE9A-223	ENST00000486902	LAMA3	Q16787	3333 aa		12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	U2SURP	O15042	1029 aa	Known RBP	12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	ALDH1A1	P00352	501 aa		12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	MYL6B	P14649	208 aa		12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	SLC4A8	Q2Y0W8	1093 aa		12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	SPRYD7	Q5W111	196 aa		12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	DDX46	Q7L014	1031 aa	Known RBP	12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	MCM10	Q7L590	875 aa		12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	IFNL1	Q8IU54	200 aa		12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	RASEF	Q8IZ41	740 aa		12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	PHACTR3	Q96KR7	559 aa		12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	UTP14A	Q9BVJ6	771 aa	Known RBP	12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	POLL	Q9UGP5	575 aa		12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	SCN9A	Q15858	1988 aa		12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	LRRC37A	A6NMS7	1700 aa		12.08	□□□□□ -0.48
PDE9A-223	ENST00000486902	C6orf229	H3BNL8	230 aa		12.07	□□□□□ -0.48
PDE9A-223	ENST00000486902	TCIRG1	Q13488	830 aa		12.07	□□□□□ -0.48
PDE9A-223	ENST00000486902	PRKG1	Q13976	671 aa		12.07	□□□□□ -0.48
PDE9A-223	ENST00000486902	PARP10	Q53GL7	1025 aa		12.07	□□□□□ -0.48
PDE9A-223	ENST00000486902	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.07	□□□□□ -0.48
PDE9A-223	ENST00000486902	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.07	□□□□□ -0.48
PDE9A-223	ENST00000486902	LAMB4	A4D0S4	1761 aa		12.07	□□□□□ -0.48
PDE9A-223	ENST00000486902	LAMB2	P55268	1798 aa		12.07	□□□□□ -0.48
PDE9A-223	ENST00000486902	COL3A1	P02461	1466 aa	Predicted RBP	12.07	□□□□□ -0.48
PDE9A-223	ENST00000486902	UNC80	Q8N2C7	3258 aa		12.06	□□□□□ -0.48
PDE9A-223	ENST00000486902	TAF1	P21675	1872 aa		12.06	□□□□□ -0.48
PDE9A-223	ENST00000486902	WTIP	A6NIX2	430 aa	Predicted RBP	12.06	□□□□□ -0.48
PDE9A-223	ENST00000486902	GPSM2	P81274	684 aa		12.06	□□□□□ -0.48
PDE9A-223	ENST00000486902	SLC9C1	Q4G0N8	1177 aa		12.06	□□□□□ -0.48
PDE9A-223	ENST00000486902	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.06	□□□□□ -0.48
PDE9A-223	ENST00000486902	DPF3	Q92784	378 aa		12.06	□□□□□ -0.48
PDE9A-223	ENST00000486902	KNSTRN	Q9Y448	316 aa		12.06	□□□□□ -0.48
PDE9A-223	ENST00000486902	PTCH2	Q9Y6C5	1203 aa		12.06	□□□□□ -0.48
PDE9A-223	ENST00000486902	KDM3B	Q7LBC6	1761 aa		12.05	□□□□□ -0.48
PDE9A-223	ENST00000486902	HSPA5	P11021	654 aa	Known RBP	12.05	□□□□□ -0.48
PDE9A-223	ENST00000486902	CRHR2	Q13324	411 aa		12.05	□□□□□ -0.48
PDE9A-223	ENST00000486902	DCTN1	Q14203	1278 aa		12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms