RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PDCP20941 246 aa21.4■■□□□ 1.02
PDLIM7-207ENST00000486828 C8orf37Q96NL8 207 aa21.4■■□□□ 1.02
PDLIM7-207ENST00000486828 NEK1Q96PY6 1258 aa21.4■■□□□ 1.02
PDLIM7-207ENST00000486828 PAG1Q9NWQ8 432 aa21.4■■□□□ 1.02
PDLIM7-207ENST00000486828 DTNBO60941 627 aa21.39■■□□□ 1.02
PDLIM7-207ENST00000486828 DNM1Q05193 864 aaKnown RBP21.39■■□□□ 1.02
PDLIM7-207ENST00000486828 LRRC24Q50LG9 513 aa21.39■■□□□ 1.02
PDLIM7-207ENST00000486828 LARP1BQ659C4 914 aaKnown RBP21.39■■□□□ 1.02
PDLIM7-207ENST00000486828 ZSCAN30Q86W11 494 aa21.39■■□□□ 1.02
PDLIM7-207ENST00000486828 LETM1O95202 739 aaPredicted RBP21.39■■□□□ 1.01
PDLIM7-207ENST00000486828 TIMM10P62072 90 aa21.39■■□□□ 1.01
PDLIM7-207ENST00000486828 TCIRG1Q13488 830 aa21.39■■□□□ 1.01
PDLIM7-207ENST00000486828 HELLSQ9NRZ9 838 aa21.39■■□□□ 1.01
PDLIM7-207ENST00000486828 PLCH1Q4KWH8 1693 aa21.39■■□□□ 1.01
PDLIM7-207ENST00000486828 GOLIM4O00461 696 aa21.38■■□□□ 1.01
PDLIM7-207ENST00000486828 MEX3CQ5U5Q3 659 aaKnown RBP21.38■■□□□ 1.01
PDLIM7-207ENST00000486828 NGLY1Q96IV0 654 aa21.38■■□□□ 1.01
PDLIM7-207ENST00000486828 ZNF594Q96JF6 807 aaPredicted RBP21.38■■□□□ 1.01
PDLIM7-207ENST00000486828 CCDC9Q9Y3X0 531 aaKnown RBP21.38■■□□□ 1.01
PDLIM7-207ENST00000486828 SLIT2O94813 1529 aa21.38■■□□□ 1.01
PDLIM7-207ENST00000486828 CYP21A2P08686 494 aa21.37■■□□□ 1.01
PDLIM7-207ENST00000486828 VSIG10Q8N0Z9 540 aa21.37■■□□□ 1.01
PDLIM7-207ENST00000486828 TEX13AQ9BXU3 409 aaPredicted RBP21.37■■□□□ 1.01
PDLIM7-207ENST00000486828 SPEF2Q9C093 1822 aa21.37■■□□□ 1.01
PDLIM7-207ENST00000486828 TRIM28Q13263 835 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-207ENST00000486828 A0A1B0GUL7 405 aa21.36■■□□□ 1.01
PDLIM7-207ENST00000486828 KLHL34Q8N239 644 aa21.36■■□□□ 1.01
PDLIM7-207ENST00000486828 RNF214Q8ND24 703 aa21.36■■□□□ 1.01
PDLIM7-207ENST00000486828 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.36■■□□□ 1.01
PDLIM7-207ENST00000486828 ZMYM1Q5SVZ6 1142 aa21.35■■□□□ 1.01
PDLIM7-207ENST00000486828 DSCC1Q9BVC3 393 aa21.35■■□□□ 1.01
PDLIM7-207ENST00000486828 ANO8Q9HCE9 1232 aaPredicted RBP21.35■■□□□ 1.01
PDLIM7-207ENST00000486828 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.35■■□□□ 1.01
PDLIM7-207ENST00000486828 FBXO3Q9UK99 471 aa21.35■■□□□ 1.01
PDLIM7-207ENST00000486828 IFIT1P09914 478 aaKnown RBP21.35■■□□□ 1.01
PDLIM7-207ENST00000486828 CDC37L1Q7L3B6 337 aa21.35■■□□□ 1.01
PDLIM7-207ENST00000486828 PUS3Q9BZE2 481 aaKnown RBP21.35■■□□□ 1.01
PDLIM7-207ENST00000486828 PCCAP05165 728 aaPredicted RBP21.34■■□□□ 1.01
PDLIM7-207ENST00000486828 STK3Q13188 491 aa21.34■■□□□ 1.01
PDLIM7-207ENST00000486828 CCDC57Q2TAC2 916 aa21.34■■□□□ 1.01
PDLIM7-207ENST00000486828 KIF6Q6ZMV9 814 aa21.34■■□□□ 1.01
PDLIM7-207ENST00000486828 DNAJC10Q8IXB1 793 aa21.34■■□□□ 1.01
PDLIM7-207ENST00000486828 FNBP4Q8N3X1 1017 aaPredicted RBP21.34■■□□□ 1.01
PDLIM7-207ENST00000486828 FAM184AQ8NB25 1140 aa21.34■■□□□ 1.01
PDLIM7-207ENST00000486828 PIGBQ92521 554 aa21.34■■□□□ 1.01
PDLIM7-207ENST00000486828 GTF3C6Q969F1 213 aa21.34■■□□□ 1.01
PDLIM7-207ENST00000486828 CEP126Q9P2H0 1117 aa21.34■■□□□ 1.01
PDLIM7-207ENST00000486828 ASAP1Q9ULH1 1129 aa21.34■■□□□ 1.01
PDLIM7-207ENST00000486828 NWD2Q9ULI1 1742 aa21.34■■□□□ 1.01
PDLIM7-207ENST00000486828 Q6ZUG5 572 aa21.33■■□□□ 1.01
PDLIM7-207ENST00000486828 PLA2G12BQ9BX93 195 aa21.33■■□□□ 1.01
PDLIM7-207ENST00000486828 NRAPQ86VF7 1730 aa21.33■■□□□ 1.01
PDLIM7-207ENST00000486828 HMGB1P09429 215 aaKnown RBP21.33■■□□□ 1
PDLIM7-207ENST00000486828 KRT85P78386 507 aa21.33■■□□□ 1
PDLIM7-207ENST00000486828 ZNF330Q9Y3S2 320 aaPredicted RBP21.33■■□□□ 1
PDLIM7-207ENST00000486828 BCL9LQ86UU0 1499 aa21.32■■□□□ 1
PDLIM7-207ENST00000486828 RNF113AO15541 343 aaKnown RBP21.31■■□□□ 1
PDLIM7-207ENST00000486828 STARD3NLO95772 234 aa21.31■■□□□ 1
PDLIM7-207ENST00000486828 MSNP26038 577 aaKnown RBP21.31■■□□□ 1
PDLIM7-207ENST00000486828 UVSSAQ2YD98 709 aa21.31■■□□□ 1
PDLIM7-207ENST00000486828 STOX1Q6ZVD7 989 aa21.31■■□□□ 1
PDLIM7-207ENST00000486828 ZBTB38Q8NAP3 1195 aaPredicted RBP21.31■■□□□ 1
PDLIM7-207ENST00000486828 NOL7Q9UMY1 257 aaKnown RBP21.31■■□□□ 1
PDLIM7-207ENST00000486828 AKAP2Q9Y2D5 859 aa21.31■■□□□ 1
PDLIM7-207ENST00000486828 ELP1O95163 1332 aa21.31■■□□□ 1
PDLIM7-207ENST00000486828 SLFNL1Q499Z3 407 aa21.31■■□□□ 1
PDLIM7-207ENST00000486828 CSF1RP07333 972 aa21.3■■□□□ 1
PDLIM7-207ENST00000486828 FERMT3Q86UX7 667 aa21.3■■□□□ 1
PDLIM7-207ENST00000486828 MAST3O60307 1309 aa21.3■■□□□ 1
PDLIM7-207ENST00000486828 MAP3K15Q6ZN16 1313 aa21.3■■□□□ 1
PDLIM7-207ENST00000486828 ITGB4P16144 1822 aa21.3■■□□□ 1
PDLIM7-207ENST00000486828 LAMA4Q16363 1823 aa21.29■■□□□ 1
PDLIM7-207ENST00000486828 HSP90B1P14625 803 aaKnown RBP21.29■■□□□ 1
PDLIM7-207ENST00000486828 TPRNQ4KMQ1 711 aa21.29■■□□□ 1
PDLIM7-207ENST00000486828 CCDC158Q5M9N0 1113 aa21.29■■□□□ 1
PDLIM7-207ENST00000486828 DHX32Q7L7V1 743 aaKnown RBP21.29■■□□□ 1
PDLIM7-207ENST00000486828 TTC6Q86TZ1 520 aa21.29■■□□□ 1
PDLIM7-207ENST00000486828 DISP2A7MBM2 1401 aa21.29■■□□□ 1
PDLIM7-207ENST00000486828 HSPD1P10809 573 aaKnown RBP21.29■■□□□ 1
PDLIM7-207ENST00000486828 GIGYF2Q6Y7W6 1299 aaKnown RBP21.29■■□□□ 1
PDLIM7-207ENST00000486828 FAM89AQ96GI7 184 aa21.29■■□□□ 1
PDLIM7-207ENST00000486828 RGS17Q9UGC6 210 aaPredicted RBP21.29■■□□□ 1
PDLIM7-207ENST00000486828 USP21Q9UK80 565 aa21.29■■□□□ 1
PDLIM7-207ENST00000486828 AFF2P51816 1311 aa21.28■■□□□ 1
PDLIM7-207ENST00000486828 LRRFIP1Q32MZ4 808 aaKnown RBP21.28■■□□□ 1
PDLIM7-207ENST00000486828 TTC39AQ5SRH9 613 aa21.28■■□□□ 1
PDLIM7-207ENST00000486828 BRF1Q92994 677 aa21.28■■□□□ 1
PDLIM7-207ENST00000486828 CDHR2Q9BYE9 1310 aa21.28■■□□□ 1
PDLIM7-207ENST00000486828 CCDC39Q9UFE4 941 aa21.28■■□□□ 1
PDLIM7-207ENST00000486828 JAK2O60674 1132 aa21.27■■□□□ 1
PDLIM7-207ENST00000486828 IFIT5Q13325 482 aaKnown RBP21.27■■□□□ 1
PDLIM7-207ENST00000486828 XAGE2Q96GT9 111 aa21.27■■□□□ 1
PDLIM7-207ENST00000486828 FUCA2Q9BTY2 467 aa21.27■■□□□ 1
PDLIM7-207ENST00000486828 PFKFB2O60825 505 aa21.27■■□□□ 1
PDLIM7-207ENST00000486828 FGD1P98174 961 aa21.27■■□□□ 1
PDLIM7-207ENST00000486828 TAF7LQ5H9L4 462 aa21.27■■□□□ 1
PDLIM7-207ENST00000486828 NAP1L5Q96NT1 182 aaPredicted RBP21.27■■□□□ 1
PDLIM7-207ENST00000486828 LLPHQ9BRT6 129 aaKnown RBP21.27■■□□□ 1
PDLIM7-207ENST00000486828 AGXT2Q9BYV1 514 aa21.27■■□□□ 1
PDLIM7-207ENST00000486828 SCAND2PQ9GZW5 306 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms