RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 NCAPD2Q15021 1401 aa8.36□□□□□ -1.07
NECTIN3-208ENST00000486596 MAP2P11137 1827 aaKnown RBP8.36□□□□□ -1.07
NECTIN3-208ENST00000486596 ITGB4P16144 1822 aa8.36□□□□□ -1.07
NECTIN3-208ENST00000486596 KIF20BQ96Q89 1820 aa8.36□□□□□ -1.07
NECTIN3-208ENST00000486596 LILRB3O75022 631 aa8.35□□□□□ -1.07
NECTIN3-208ENST00000486596 HSPA6P17066 643 aa8.35□□□□□ -1.07
NECTIN3-208ENST00000486596 VARSP26640 1264 aaKnown RBP8.35□□□□□ -1.07
NECTIN3-208ENST00000486596 LINC00116Q8NCU8 138 aa8.35□□□□□ -1.07
NECTIN3-208ENST00000486596 PIGBQ92521 554 aa8.35□□□□□ -1.07
NECTIN3-208ENST00000486596 MAP10Q9P2G4 905 aa8.35□□□□□ -1.07
NECTIN3-208ENST00000486596 EMILIN1Q9Y6C2 1016 aa8.35□□□□□ -1.07
NECTIN3-208ENST00000486596 CICQ96RK0 1608 aaPredicted RBP8.35□□□□□ -1.07
NECTIN3-208ENST00000486596 KIF24Q5T7B8 1368 aa8.35□□□□□ -1.07
NECTIN3-208ENST00000486596 PER1O15534 1290 aaPredicted RBP8.34□□□□□ -1.07
NECTIN3-208ENST00000486596 ITPK1Q13572 414 aa8.34□□□□□ -1.07
NECTIN3-208ENST00000486596 TUSC1Q2TAM9 212 aa8.34□□□□□ -1.07
NECTIN3-208ENST00000486596 WASF2Q9Y6W5 498 aa8.34□□□□□ -1.07
NECTIN3-208ENST00000486596 KIAA1551Q9HCM1 1747 aa8.34□□□□□ -1.07
NECTIN3-208ENST00000486596 ANKRD26Q9UPS8 1709 aa8.34□□□□□ -1.07
NECTIN3-208ENST00000486596 PXDNLA1KZ92 1463 aa8.33□□□□□ -1.08
NECTIN3-208ENST00000486596 LOC102724428A0A0B4J2F2 783 aa8.33□□□□□ -1.08
NECTIN3-208ENST00000486596 F12P00748 615 aaPredicted RBP8.33□□□□□ -1.08
NECTIN3-208ENST00000486596 SSFA2P28290 1259 aa8.33□□□□□ -1.08
NECTIN3-208ENST00000486596 SIK1P57059 783 aa8.33□□□□□ -1.08
NECTIN3-208ENST00000486596 TMF1P82094 1093 aa8.33□□□□□ -1.08
NECTIN3-208ENST00000486596 SKIV2LQ15477 1246 aaKnown RBP8.33□□□□□ -1.08
NECTIN3-208ENST00000486596 SH3D19Q5HYK7 790 aa8.33□□□□□ -1.08
NECTIN3-208ENST00000486596 PROCA1Q8NCQ7 364 aaPredicted RBP8.33□□□□□ -1.08
NECTIN3-208ENST00000486596 SMARCC1Q92922 1105 aaPredicted RBP8.33□□□□□ -1.08
NECTIN3-208ENST00000486596 CARD14Q9BXL6 1004 aa8.33□□□□□ -1.08
NECTIN3-208ENST00000486596 NSD3Q9BZ95 1437 aa8.33□□□□□ -1.08
NECTIN3-208ENST00000486596 WIPF1O43516 503 aa8.32□□□□□ -1.08
NECTIN3-208ENST00000486596 IL27Q8NEV9 243 aa8.32□□□□□ -1.08
NECTIN3-208ENST00000486596 ASAP1Q9ULH1 1129 aa8.32□□□□□ -1.08
NECTIN3-208ENST00000486596 KDRP35968 1356 aa8.32□□□□□ -1.08
NECTIN3-208ENST00000486596 C10orf71Q711Q0 1435 aa8.31□□□□□ -1.08
NECTIN3-208ENST00000486596 TERTO14746 1132 aaKnown RBP8.31□□□□□ -1.08
NECTIN3-208ENST00000486596 PPM1GO15355 546 aaPredicted RBP8.31□□□□□ -1.08
NECTIN3-208ENST00000486596 CAPN5O15484 640 aaPredicted RBP8.31□□□□□ -1.08
NECTIN3-208ENST00000486596 MMP10P09238 476 aa8.31□□□□□ -1.08
NECTIN3-208ENST00000486596 AGERQ15109 404 aa8.31□□□□□ -1.08
NECTIN3-208ENST00000486596 TRIM46Q7Z4K8 759 aa8.31□□□□□ -1.08
NECTIN3-208ENST00000486596 TMOD3Q9NYL9 352 aa8.31□□□□□ -1.08
NECTIN3-208ENST00000486596 PHKG2P15735 406 aa8.3□□□□□ -1.08
NECTIN3-208ENST00000486596 SLC4A9Q96Q91 983 aa8.3□□□□□ -1.08
NECTIN3-208ENST00000486596 ATG3Q9NT62 314 aa8.3□□□□□ -1.08
NECTIN3-208ENST00000486596 SPG7Q9UQ90 795 aa8.3□□□□□ -1.08
NECTIN3-208ENST00000486596 TLL2Q9Y6L7 1015 aa8.3□□□□□ -1.08
NECTIN3-208ENST00000486596 KIF13BQ9NQT8 1826 aa8.3□□□□□ -1.08
NECTIN3-208ENST00000486596 N4BP2Q86UW6 1770 aaPredicted RBP8.3□□□□□ -1.08
NECTIN3-208ENST00000486596 WASHC2AQ641Q2 1341 aa8.29□□□□□ -1.08
NECTIN3-208ENST00000486596 HMGB2P26583 209 aaKnown RBP8.29□□□□□ -1.08
NECTIN3-208ENST00000486596 CTDSPL2Q05D32 466 aa8.29□□□□□ -1.08
NECTIN3-208ENST00000486596 LCE2CQ5TA81 110 aa8.29□□□□□ -1.08
NECTIN3-208ENST00000486596 CDK15Q96Q40 435 aa8.29□□□□□ -1.08
NECTIN3-208ENST00000486596 BCS1LQ9Y276 419 aa8.29□□□□□ -1.08
NECTIN3-208ENST00000486596 A0A0G2JLW4 131 aa8.28□□□□□ -1.08
NECTIN3-208ENST00000486596 IFNL2Q8IZJ0 200 aa8.28□□□□□ -1.08
NECTIN3-208ENST00000486596 NMRK2Q9NPI5 230 aa8.28□□□□□ -1.08
NECTIN3-208ENST00000486596 POLKQ9UBT6 870 aa8.28□□□□□ -1.08
NECTIN3-208ENST00000486596 C4AP0C0L4 1744 aa8.28□□□□□ -1.08
NECTIN3-208ENST00000486596 COL5A3P25940 1745 aaPredicted RBP8.28□□□□□ -1.08
NECTIN3-208ENST00000486596 AP1G2O75843 785 aa8.27□□□□□ -1.09
NECTIN3-208ENST00000486596 BMP1P13497 986 aa8.27□□□□□ -1.09
NECTIN3-208ENST00000486596 GYS1P13807 737 aa8.27□□□□□ -1.09
NECTIN3-208ENST00000486596 DPEP1P16444 411 aa8.27□□□□□ -1.09
NECTIN3-208ENST00000486596 TGFB2P61812 414 aa8.27□□□□□ -1.09
NECTIN3-208ENST00000486596 EIF4A2Q14240 407 aaKnown RBP8.27□□□□□ -1.09
NECTIN3-208ENST00000486596 DNAJC5GQ8N7S2 189 aa8.27□□□□□ -1.09
NECTIN3-208ENST00000486596 FAM174AQ8TBP5 190 aa8.27□□□□□ -1.09
NECTIN3-208ENST00000486596 FOXJ1Q92949 421 aa8.27□□□□□ -1.09
NECTIN3-208ENST00000486596 KLF16Q9BXK1 252 aaPredicted RBP8.27□□□□□ -1.09
NECTIN3-208ENST00000486596 RTCBQ9Y3I0 505 aaKnown RBP8.27□□□□□ -1.09
NECTIN3-208ENST00000486596 KDM6AO15550 1401 aaPredicted RBP8.27□□□□□ -1.09
NECTIN3-208ENST00000486596 ZNF831Q5JPB2 1677 aa8.27□□□□□ -1.09
NECTIN3-208ENST00000486596 BRCA1P38398 1863 aaKnown RBP8.26□□□□□ -1.09
NECTIN3-208ENST00000486596 TOMM70O94826 608 aa8.26□□□□□ -1.09
NECTIN3-208ENST00000486596 KCNA3P22001 575 aa8.26□□□□□ -1.09
NECTIN3-208ENST00000486596 BRPF1P55201 1214 aaPredicted RBP8.26□□□□□ -1.09
NECTIN3-208ENST00000486596 HTRA3P83110 453 aa8.26□□□□□ -1.09
NECTIN3-208ENST00000486596 NNTQ13423 1086 aa8.26□□□□□ -1.09
NECTIN3-208ENST00000486596 ARID5BQ14865 1188 aa8.26□□□□□ -1.09
NECTIN3-208ENST00000486596 CDCA8Q53HL2 280 aa8.26□□□□□ -1.09
NECTIN3-208ENST00000486596 TRAPPC3LQ5T215 181 aa8.26□□□□□ -1.09
NECTIN3-208ENST00000486596 PCMTD1Q96MG8 357 aaPredicted RBP8.26□□□□□ -1.09
NECTIN3-208ENST00000486596 CNTNAP4Q9C0A0 1308 aa8.26□□□□□ -1.09
NECTIN3-208ENST00000486596 ADH1CP00326 375 aa8.25□□□□□ -1.09
NECTIN3-208ENST00000486596 TNNT2P45379 298 aaPredicted RBP8.25□□□□□ -1.09
NECTIN3-208ENST00000486596 ARHGAP27Q6ZUM4 889 aa8.25□□□□□ -1.09
NECTIN3-208ENST00000486596 NPAS3Q8IXF0 933 aa8.25□□□□□ -1.09
NECTIN3-208ENST00000486596 NLGN1Q8N2Q7 840 aa8.25□□□□□ -1.09
NECTIN3-208ENST00000486596 LRRN4Q8WUT4 740 aa8.25□□□□□ -1.09
NECTIN3-208ENST00000486596 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.25□□□□□ -1.09
NECTIN3-208ENST00000486596 WDR90Q96KV7 1748 aa8.25□□□□□ -1.09
NECTIN3-208ENST00000486596 KCPQ6ZWJ8 1503 aa8.24□□□□□ -1.09
NECTIN3-208ENST00000486596 PLEKHG2Q9H7P9 1386 aa8.24□□□□□ -1.09
NECTIN3-208ENST00000486596 RPS6KA4O75676 772 aa8.24□□□□□ -1.09
NECTIN3-208ENST00000486596 TIMP2P16035 220 aa8.24□□□□□ -1.09
NECTIN3-208ENST00000486596 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
NECTIN3-208ENST00000486596 C9orf131Q5VYM1 1079 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms