RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 SREK1Q8WXA9 508 aaKnown RBP8.2□□□□□ -1.1
USP41-204ENST00000486536 ALKBH8Q96BT7 664 aaKnown RBP8.2□□□□□ -1.1
USP41-204ENST00000486536 RNF19AQ9NV58 838 aa8.2□□□□□ -1.1
USP41-204ENST00000486536 HCSTQ9UBK5 93 aa8.2□□□□□ -1.1
USP41-204ENST00000486536 WWC3Q9ULE0 1092 aa8.2□□□□□ -1.1
USP41-204ENST00000486536 POLIQ9UNA4 740 aa8.2□□□□□ -1.1
USP41-204ENST00000486536 ZNF232Q9UNY5 417 aa8.2□□□□□ -1.1
USP41-204ENST00000486536 TRPM1Q7Z4N2 1603 aa8.2□□□□□ -1.1
USP41-204ENST00000486536 SCAF11Q99590 1463 aaKnown RBP8.19□□□□□ -1.1
USP41-204ENST00000486536 EML1O00423 815 aa8.19□□□□□ -1.1
USP41-204ENST00000486536 WNT7AO00755 349 aa8.19□□□□□ -1.1
USP41-204ENST00000486536 GPR182O15218 404 aa8.19□□□□□ -1.1
USP41-204ENST00000486536 HIRAP54198 1017 aaPredicted RBP8.19□□□□□ -1.1
USP41-204ENST00000486536 ALDH16A1Q8IZ83 802 aa8.19□□□□□ -1.1
USP41-204ENST00000486536 NBPF15Q8N660 670 aa8.19□□□□□ -1.1
USP41-204ENST00000486536 TMEM87AQ8NBN3 555 aa8.19□□□□□ -1.1
USP41-204ENST00000486536 MRGPRX2Q96LB1 330 aa8.19□□□□□ -1.1
USP41-204ENST00000486536 HIRIP3Q9BW71 556 aaPredicted RBP8.19□□□□□ -1.1
USP41-204ENST00000486536 MRS2Q9HD23 443 aa8.19□□□□□ -1.1
USP41-204ENST00000486536 EIF3AQ14152 1382 aaKnown RBP8.19□□□□□ -1.1
USP41-204ENST00000486536 TMEM2Q9UHN6 1383 aa8.19□□□□□ -1.1
USP41-204ENST00000486536 RIMS2Q9UQ26 1411 aa8.19□□□□□ -1.1
USP41-204ENST00000486536 KDM5AP29375 1690 aaKnown RBP8.18□□□□□ -1.1
USP41-204ENST00000486536 ST20-MTHFSA0A0A6YYL1 179 aa8.18□□□□□ -1.1
USP41-204ENST00000486536 ADH1AP07327 375 aa8.18□□□□□ -1.1
USP41-204ENST00000486536 MZF1P28698 734 aaPredicted RBP8.18□□□□□ -1.1
USP41-204ENST00000486536 DAB2P98082 770 aa8.18□□□□□ -1.1
USP41-204ENST00000486536 ATP2B2Q01814 1243 aa8.18□□□□□ -1.1
USP41-204ENST00000486536 DNM1Q05193 864 aaKnown RBP8.18□□□□□ -1.1
USP41-204ENST00000486536 CLN3Q13286 438 aa8.18□□□□□ -1.1
USP41-204ENST00000486536 SH3PXD2AQ5TCZ1 1133 aa8.18□□□□□ -1.1
USP41-204ENST00000486536 TMC4Q7Z404 712 aa8.18□□□□□ -1.1
USP41-204ENST00000486536 THEMISQ8N1K5 641 aaPredicted RBP8.18□□□□□ -1.1
USP41-204ENST00000486536 KDF1Q8NAX2 398 aaPredicted RBP8.18□□□□□ -1.1
USP41-204ENST00000486536 ZDHHC1Q8WTX9 485 aa8.18□□□□□ -1.1
USP41-204ENST00000486536 IFT43Q96FT9 208 aa8.18□□□□□ -1.1
USP41-204ENST00000486536 CABP1Q9NZU7 370 aa8.18□□□□□ -1.1
USP41-204ENST00000486536 IQSEC2Q5JU85 1478 aa8.18□□□□□ -1.1
USP41-204ENST00000486536 SETBP1Q9Y6X0 1596 aa8.18□□□□□ -1.1
USP41-204ENST00000486536 IFT172Q9UG01 1749 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 KIAA1210Q9ULL0 1709 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 SORBS3O60504 671 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 USP5P45974 858 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 PSMD2Q13200 908 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 DGKZQ13574 1117 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 RTN1Q16799 776 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 CDAN1Q8IWY9 1227 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 ETFBKMTQ8IXQ9 262 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 GJD3Q8N144 294 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 EDEM1Q92611 657 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 EMID1Q96A84 441 aaPredicted RBP8.17□□□□□ -1.1
USP41-204ENST00000486536 SETDB2Q96T68 719 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 FHDC1Q9C0D6 1143 aaPredicted RBP8.17□□□□□ -1.1
USP41-204ENST00000486536 PARP3Q9Y6F1 533 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 LTBP4Q8N2S1 1624 aa8.17□□□□□ -1.1
USP41-204ENST00000486536 C3P01024 1663 aa8.16□□□□□ -1.1
USP41-204ENST00000486536 PTGIRP43119 386 aa8.16□□□□□ -1.1
USP41-204ENST00000486536 CBLBQ13191 982 aa8.16□□□□□ -1.1
USP41-204ENST00000486536 ENOX2Q16206 610 aaKnown RBP8.16□□□□□ -1.1
USP41-204ENST00000486536 WASHC2AQ641Q2 1341 aa8.16□□□□□ -1.1
USP41-204ENST00000486536 ZNF295-AS1Q8N0V1 137 aa8.16□□□□□ -1.1
USP41-204ENST00000486536 CCDC7Q96M83 1385 aa8.16□□□□□ -1.1
USP41-204ENST00000486536 NLRP3Q96P20 1036 aa8.16□□□□□ -1.1
USP41-204ENST00000486536 KLK14Q9P0G3 267 aa8.16□□□□□ -1.1
USP41-204ENST00000486536 PPP1R1BQ9UD71 204 aaPredicted RBP8.16□□□□□ -1.1
USP41-204ENST00000486536 EID1Q9Y6B2 187 aa8.16□□□□□ -1.1
USP41-204ENST00000486536 PPLO60437 1756 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 ADGRB1O14514 1584 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 SLIT1O75093 1534 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 ARHGAP23Q9P227 1491 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 KIF7Q2M1P5 1343 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 MEN1O00255 615 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 ALDH1A1P00352 501 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 PDGFAP04085 211 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 SLC19A1P41440 591 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 ZAP70P43403 619 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 TMF1P82094 1093 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 ALG1LQ6GMV1 187 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 TESK2Q96S53 571 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 PHACTR1Q9C0D0 580 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 VTI1BQ9UEU0 232 aa8.15□□□□□ -1.1
USP41-204ENST00000486536 PLEKHG1Q9ULL1 1385 aa8.14□□□□□ -1.11
USP41-204ENST00000486536 SBNO2Q9Y2G9 1366 aa8.14□□□□□ -1.11
USP41-204ENST00000486536 PNMA6FA0A0J9YX94 578 aa8.14□□□□□ -1.11
USP41-204ENST00000486536 C11orf95C9JLR9 678 aaPredicted RBP8.14□□□□□ -1.11
USP41-204ENST00000486536 DDX10Q13206 875 aaKnown RBP8.14□□□□□ -1.11
USP41-204ENST00000486536 NNTQ13423 1086 aa8.14□□□□□ -1.11
USP41-204ENST00000486536 Q6ZVU0 165 aa8.14□□□□□ -1.11
USP41-204ENST00000486536 NIFKQ9BYG3 293 aaKnown RBP8.14□□□□□ -1.11
USP41-204ENST00000486536 SETD1BQ9UPS6 1966 aaKnown RBP8.13□□□□□ -1.11
USP41-204ENST00000486536 PCSK2P16519 638 aa8.13□□□□□ -1.11
USP41-204ENST00000486536 C1orf53Q5VUE5 145 aa8.13□□□□□ -1.11
USP41-204ENST00000486536 METTL16Q86W50 562 aaKnown RBP8.13□□□□□ -1.11
USP41-204ENST00000486536 PIK3R5Q8WYR1 880 aa8.13□□□□□ -1.11
USP41-204ENST00000486536 AGBL1Q96MI9 1066 aa8.13□□□□□ -1.11
USP41-204ENST00000486536 ZSCAN10Q96SZ4 725 aaPredicted RBP8.13□□□□□ -1.11
USP41-204ENST00000486536 WASF2Q9Y6W5 498 aa8.13□□□□□ -1.11
USP41-204ENST00000486536 UBR1Q8IWV7 1749 aa8.12□□□□□ -1.11
USP41-204ENST00000486536 CENPJQ9HC77 1338 aaPredicted RBP8.12□□□□□ -1.11
USP41-204ENST00000486536 UBAP1LF5GYI3 381 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms