RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 LDHDQ86WU2 507 aa13.98□□□□□ -0.17
SNX21-211ENST00000486336 PLA2G12BQ9BX93 195 aa13.98□□□□□ -0.17
SNX21-211ENST00000486336 SMC4Q9NTJ3 1288 aa13.98□□□□□ -0.17
SNX21-211ENST00000486336 GRM8O00222 908 aa13.97□□□□□ -0.17
SNX21-211ENST00000486336 ALDH1L1O75891 902 aa13.97□□□□□ -0.17
SNX21-211ENST00000486336 FAM161AQ3B820 660 aa13.97□□□□□ -0.17
SNX21-211ENST00000486336 PNMA8AQ86V59 439 aaPredicted RBP13.97□□□□□ -0.17
SNX21-211ENST00000486336 MPHOSPH8Q99549 860 aa13.97□□□□□ -0.17
SNX21-211ENST00000486336 BSDC1Q9NW68 430 aaPredicted RBP13.97□□□□□ -0.17
SNX21-211ENST00000486336 PODXL2Q9NZ53 605 aa13.97□□□□□ -0.17
SNX21-211ENST00000486336 SCN4AP35499 1836 aa13.97□□□□□ -0.17
SNX21-211ENST00000486336 XDHP47989 1333 aa13.96□□□□□ -0.17
SNX21-211ENST00000486336 ANKRD18BA2A2Z9 1011 aa13.96□□□□□ -0.17
SNX21-211ENST00000486336 YDJCA8MPS7 323 aa13.96□□□□□ -0.17
SNX21-211ENST00000486336 ECE2O60344 883 aa13.96□□□□□ -0.17
SNX21-211ENST00000486336 CSF1RP07333 972 aa13.96□□□□□ -0.17
SNX21-211ENST00000486336 ATP2B4P23634 1241 aa13.96□□□□□ -0.17
SNX21-211ENST00000486336 GMPSP49915 693 aaPredicted RBP13.96□□□□□ -0.17
SNX21-211ENST00000486336 SCNN1DP51172 638 aa13.96□□□□□ -0.17
SNX21-211ENST00000486336 TRMT2AQ8IZ69 625 aaKnown RBP13.96□□□□□ -0.17
SNX21-211ENST00000486336 MINPP1Q9UNW1 487 aa13.96□□□□□ -0.17
SNX21-211ENST00000486336 PTPRCP08575 1304 aa13.95□□□□□ -0.18
SNX21-211ENST00000486336 PSMD14O00487 310 aa13.95□□□□□ -0.18
SNX21-211ENST00000486336 FOXO4P98177 505 aa13.95□□□□□ -0.18
SNX21-211ENST00000486336 HNRNPUQ00839 825 aaKnown RBP eCLIP13.95□□□□□ -0.18
SNX21-211ENST00000486336 IFIT5Q13325 482 aaKnown RBP13.95□□□□□ -0.18
SNX21-211ENST00000486336 ALDH1L2Q3SY69 923 aa13.95□□□□□ -0.18
SNX21-211ENST00000486336 LMBR1LQ6UX01 489 aa13.95□□□□□ -0.18
SNX21-211ENST00000486336 KCNQ5Q9NR82 932 aa13.95□□□□□ -0.18
SNX21-211ENST00000486336 MYH3P11055 1940 aa13.95□□□□□ -0.18
SNX21-211ENST00000486336 LRRC37AA6NMS7 1700 aa13.95□□□□□ -0.18
SNX21-211ENST00000486336 RTL9Q8NET4 1388 aa13.95□□□□□ -0.18
SNX21-211ENST00000486336 TAF7LQ5H9L4 462 aa13.94□□□□□ -0.18
SNX21-211ENST00000486336 EPHA10Q5JZY3 1008 aa13.94□□□□□ -0.18
SNX21-211ENST00000486336 MAP1SQ66K74 1059 aaPredicted RBP13.94□□□□□ -0.18
SNX21-211ENST00000486336 DUOX1Q9NRD9 1551 aa13.94□□□□□ -0.18
SNX21-211ENST00000486336 GPRC5DQ9NZD1 345 aa13.94□□□□□ -0.18
SNX21-211ENST00000486336 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
SNX21-211ENST00000486336 WTIPA6NIX2 430 aaPredicted RBP13.93□□□□□ -0.18
SNX21-211ENST00000486336 CT47B1P0C2W7 299 aaPredicted RBP13.93□□□□□ -0.18
SNX21-211ENST00000486336 KCNJ4P48050 445 aa13.93□□□□□ -0.18
SNX21-211ENST00000486336 CCT4P50991 539 aaKnown RBP13.93□□□□□ -0.18
SNX21-211ENST00000486336 CCDC57Q2TAC2 916 aa13.93□□□□□ -0.18
SNX21-211ENST00000486336 USP50Q70EL3 339 aaPredicted RBP13.93□□□□□ -0.18
SNX21-211ENST00000486336 CNTROBQ8N137 903 aa13.93□□□□□ -0.18
SNX21-211ENST00000486336 SUCLG2Q96I99 432 aa13.93□□□□□ -0.18
SNX21-211ENST00000486336 ADARB2Q9NS39 739 aaKnown RBP13.93□□□□□ -0.18
SNX21-211ENST00000486336 CNOT7Q9UIV1 285 aaKnown RBP13.93□□□□□ -0.18
SNX21-211ENST00000486336 H7C1D1 291 aa13.92□□□□□ -0.18
SNX21-211ENST00000486336 NBPF7P0C2Y1 421 aaPredicted RBP13.92□□□□□ -0.18
SNX21-211ENST00000486336 DNAJC5GQ8N7S2 189 aa13.92□□□□□ -0.18
SNX21-211ENST00000486336 HELBQ8NG08 1087 aaPredicted RBP13.92□□□□□ -0.18
SNX21-211ENST00000486336 ZNF594Q96JF6 807 aaPredicted RBP13.92□□□□□ -0.18
SNX21-211ENST00000486336 ANKRD2Q9GZV1 360 aa13.92□□□□□ -0.18
SNX21-211ENST00000486336 NOB1Q9ULX3 412 aaKnown RBP13.92□□□□□ -0.18
SNX21-211ENST00000486336 SPEF2Q9C093 1822 aa13.92□□□□□ -0.18
SNX21-211ENST00000486336 SHTN1A0MZ66 631 aa13.91□□□□□ -0.18
SNX21-211ENST00000486336 PLIN1O60240 522 aa13.91□□□□□ -0.18
SNX21-211ENST00000486336 CHRNDQ07001 517 aa13.91□□□□□ -0.18
SNX21-211ENST00000486336 RBM26Q5T8P6 1007 aaKnown RBP13.91□□□□□ -0.18
SNX21-211ENST00000486336 MICALL2Q8IY33 904 aa13.91□□□□□ -0.18
SNX21-211ENST00000486336 FBXW7Q969H0 707 aa13.91□□□□□ -0.18
SNX21-211ENST00000486336 LEMD3Q9Y2U8 911 aa13.91□□□□□ -0.18
SNX21-211ENST00000486336 LTBP1Q14766 1721 aa13.9□□□□□ -0.18
SNX21-211ENST00000486336 TAF5LO75529 589 aa13.9□□□□□ -0.18
SNX21-211ENST00000486336 ITGBL1O95965 494 aaPredicted RBP13.9□□□□□ -0.18
SNX21-211ENST00000486336 LDHAL6AQ6ZMR3 332 aa13.9□□□□□ -0.18
SNX21-211ENST00000486336 KLRG1Q96E93 195 aa13.9□□□□□ -0.18
SNX21-211ENST00000486336 CNNM1Q9NRU3 951 aa13.9□□□□□ -0.18
SNX21-211ENST00000486336 ZNF804BA4D1E1 1349 aa13.9□□□□□ -0.19
SNX21-211ENST00000486336 CEP350Q5VT06 3117 aa13.89□□□□□ -0.19
SNX21-211ENST00000486336 RARSP54136 660 aaKnown RBP13.89□□□□□ -0.19
SNX21-211ENST00000486336 DPF2Q92785 391 aa13.89□□□□□ -0.19
SNX21-211ENST00000486336 API5Q9BZZ5 524 aaKnown RBP13.89□□□□□ -0.19
SNX21-211ENST00000486336 BICC1Q9H694 974 aaKnown RBP13.89□□□□□ -0.19
SNX21-211ENST00000486336 USP17L3A6NCW0 530 aa13.88□□□□□ -0.19
SNX21-211ENST00000486336 USP17L4A6NCW7 530 aa13.88□□□□□ -0.19
SNX21-211ENST00000486336 SNAP23O00161 211 aa13.88□□□□□ -0.19
SNX21-211ENST00000486336 VIL1P09327 827 aaKnown RBP13.88□□□□□ -0.19
SNX21-211ENST00000486336 RPS12P25398 132 aaKnown RBP13.88□□□□□ -0.19
SNX21-211ENST00000486336 TBC1D10BQ4KMP7 808 aaPredicted RBP13.88□□□□□ -0.19
SNX21-211ENST00000486336 USP17L1Q7RTZ2 530 aa13.88□□□□□ -0.19
SNX21-211ENST00000486336 SAMD7Q7Z3H4 446 aa13.88□□□□□ -0.19
SNX21-211ENST00000486336 PODNQ7Z5L7 613 aa13.88□□□□□ -0.19
SNX21-211ENST00000486336 TXNRD3Q86VQ6 643 aa13.88□□□□□ -0.19
SNX21-211ENST00000486336 TRPM4Q8TD43 1214 aa13.88□□□□□ -0.19
SNX21-211ENST00000486336 KAZALD1Q96I82 304 aa13.88□□□□□ -0.19
SNX21-211ENST00000486336 USP44Q9H0E7 712 aa13.88□□□□□ -0.19
SNX21-211ENST00000486336 CREBZFQ9NS37 354 aa13.88□□□□□ -0.19
SNX21-211ENST00000486336 UTYO14607 1347 aa13.88□□□□□ -0.19
SNX21-211ENST00000486336 PASKQ96RG2 1323 aa13.88□□□□□ -0.19
SNX21-211ENST00000486336 MED23Q9ULK4 1368 aa13.87□□□□□ -0.19
SNX21-211ENST00000486336 TMEM88BA6NKF7 163 aa13.87□□□□□ -0.19
SNX21-211ENST00000486336 KLRK1P26718 216 aa13.87□□□□□ -0.19
SNX21-211ENST00000486336 HIRAP54198 1017 aaPredicted RBP13.87□□□□□ -0.19
SNX21-211ENST00000486336 FMR1Q06787 632 aaKnown RBP eCLIP13.87□□□□□ -0.19
SNX21-211ENST00000486336 RSBN1LQ6PCB5 846 aaPredicted RBP13.87□□□□□ -0.19
SNX21-211ENST00000486336 COA1Q9GZY4 146 aa13.87□□□□□ -0.19
SNX21-211ENST00000486336 MKRN1Q9UHC7 482 aaKnown RBP13.87□□□□□ -0.19
SNX21-211ENST00000486336 TRAF5O00463 557 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms