RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 HABP4Q5JVS0 413 aaKnown RBP12.12□□□□□ -0.47
CCDC142-208ENST00000486335 XAGE3Q8WTP9 111 aa12.12□□□□□ -0.47
CCDC142-208ENST00000486335 TMX4Q9H1E5 349 aaPredicted RBP12.12□□□□□ -0.47
CCDC142-208ENST00000486335 NSFL1CQ9UNZ2 370 aaKnown RBP12.12□□□□□ -0.47
CCDC142-208ENST00000486335 ANKRD36CQ5JPF3 1778 aa12.12□□□□□ -0.47
CCDC142-208ENST00000486335 CCER2I3L3R5 266 aa12.11□□□□□ -0.47
CCDC142-208ENST00000486335 TM4SF4P48230 202 aa12.11□□□□□ -0.47
CCDC142-208ENST00000486335 SCARF1Q14162 830 aa12.11□□□□□ -0.47
CCDC142-208ENST00000486335 PKN2Q16513 984 aaKnown RBP12.11□□□□□ -0.47
CCDC142-208ENST00000486335 PRAMEF18Q5VWM3 479 aa12.11□□□□□ -0.47
CCDC142-208ENST00000486335 TBC1D16Q8TBP0 767 aa12.11□□□□□ -0.47
CCDC142-208ENST00000486335 PRKRIP1Q9H875 184 aaPredicted RBP12.11□□□□□ -0.47
CCDC142-208ENST00000486335 TRMT112Q9UI30 125 aaKnown RBP12.11□□□□□ -0.47
CCDC142-208ENST00000486335 LRRC37AA6NMS7 1700 aa12.11□□□□□ -0.47
CCDC142-208ENST00000486335 SH3TC1Q8TE82 1336 aa12.11□□□□□ -0.47
CCDC142-208ENST00000486335 CENPFP49454 3210 aa12.1□□□□□ -0.47
CCDC142-208ENST00000486335 AKAP11Q9UKA4 1901 aa12.1□□□□□ -0.47
CCDC142-208ENST00000486335 WTIPA6NIX2 430 aaPredicted RBP12.1□□□□□ -0.47
CCDC142-208ENST00000486335 UBE2Q2LH0YL09 131 aa12.1□□□□□ -0.47
CCDC142-208ENST00000486335 GPR25O00155 361 aa12.1□□□□□ -0.47
CCDC142-208ENST00000486335 NFE2L2Q16236 605 aa12.1□□□□□ -0.47
CCDC142-208ENST00000486335 KRT24Q2M2I5 525 aa12.1□□□□□ -0.47
CCDC142-208ENST00000486335 ANGEL2Q5VTE6 544 aaKnown RBP12.1□□□□□ -0.47
CCDC142-208ENST00000486335 TMC4Q7Z404 712 aa12.1□□□□□ -0.47
CCDC142-208ENST00000486335 ISCA1Q9BUE6 129 aa12.1□□□□□ -0.47
CCDC142-208ENST00000486335 KIAA0100Q14667 2235 aaKnown RBP12.1□□□□□ -0.47
CCDC142-208ENST00000486335 SZT2Q5T011 3432 aa12.09□□□□□ -0.47
CCDC142-208ENST00000486335 AIMP1Q12904 312 aaKnown RBP12.09□□□□□ -0.47
CCDC142-208ENST00000486335 NOM1Q5C9Z4 860 aaKnown RBP12.09□□□□□ -0.47
CCDC142-208ENST00000486335 SULF1Q8IWU6 871 aa12.09□□□□□ -0.47
CCDC142-208ENST00000486335 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
CCDC142-208ENST00000486335 NECTIN2Q92692 538 aa12.09□□□□□ -0.47
CCDC142-208ENST00000486335 FAM89AQ96GI7 184 aa12.09□□□□□ -0.47
CCDC142-208ENST00000486335 DLG5Q8TDM6 1919 aa12.09□□□□□ -0.47
CCDC142-208ENST00000486335 POTEFA5A3E0 1075 aa12.08□□□□□ -0.48
CCDC142-208ENST00000486335 C6orf229H3BNL8 230 aa12.08□□□□□ -0.48
CCDC142-208ENST00000486335 CAP1Q01518 475 aa12.08□□□□□ -0.48
CCDC142-208ENST00000486335 RALBP1Q15311 655 aa12.08□□□□□ -0.48
CCDC142-208ENST00000486335 FBXO46Q6PJ61 603 aaPredicted RBP12.08□□□□□ -0.48
CCDC142-208ENST00000486335 PODXL2Q9NZ53 605 aa12.08□□□□□ -0.48
CCDC142-208ENST00000486335 ZNF609O15014 1411 aa12.07□□□□□ -0.48
CCDC142-208ENST00000486335 FKBP1BP68106 108 aa12.07□□□□□ -0.48
CCDC142-208ENST00000486335 HSP90AB3PQ58FF7 597 aa12.07□□□□□ -0.48
CCDC142-208ENST00000486335 RSBN1LQ6PCB5 846 aaPredicted RBP12.07□□□□□ -0.48
CCDC142-208ENST00000486335 CFHR5Q9BXR6 569 aa12.07□□□□□ -0.48
CCDC142-208ENST00000486335 SEC31BQ9NQW1 1179 aa12.07□□□□□ -0.48
CCDC142-208ENST00000486335 TSPYL4Q9UJ04 414 aa12.07□□□□□ -0.48
CCDC142-208ENST00000486335 FXR1P51114 621 aaKnown RBP eCLIP12.06□□□□□ -0.48
CCDC142-208ENST00000486335 RPS8P62241 208 aaKnown RBP12.06□□□□□ -0.48
CCDC142-208ENST00000486335 NBPF9Q3BBW0 867 aa12.06□□□□□ -0.48
CCDC142-208ENST00000486335 HDAC9Q9UKV0 1011 aa12.06□□□□□ -0.48
CCDC142-208ENST00000486335 DDX60Q8IY21 1712 aaKnown RBP12.06□□□□□ -0.48
CCDC142-208ENST00000486335 ATP5J2-PTCD1G3V325 749 aa12.05□□□□□ -0.48
CCDC142-208ENST00000486335 PTPN12Q05209 780 aaKnown RBP12.05□□□□□ -0.48
CCDC142-208ENST00000486335 AGBL3Q8NEM8 1001 aa12.05□□□□□ -0.48
CCDC142-208ENST00000486335 MXD3Q9BW11 206 aa12.05□□□□□ -0.48
CCDC142-208ENST00000486335 MKRN3Q13064 507 aaKnown RBP12.04□□□□□ -0.48
CCDC142-208ENST00000486335 TRIM28Q13263 835 aaKnown RBP12.04□□□□□ -0.48
CCDC142-208ENST00000486335 RTL5Q5HYW3 569 aaPredicted RBP12.04□□□□□ -0.48
CCDC142-208ENST00000486335 PLBD2Q8NHP8 589 aa12.04□□□□□ -0.48
CCDC142-208ENST00000486335 ZC3H12CQ9C0D7 883 aaKnown RBP12.04□□□□□ -0.48
CCDC142-208ENST00000486335 MYOZ2Q9NPC6 264 aa12.04□□□□□ -0.48
CCDC142-208ENST00000486335 PAPPA2Q9BXP8 1791 aa12.04□□□□□ -0.48
CCDC142-208ENST00000486335 PITPNM2Q9BZ72 1349 aa12.04□□□□□ -0.48
CCDC142-208ENST00000486335 FKTNO75072 461 aa12.03□□□□□ -0.48
CCDC142-208ENST00000486335 USP17L8P0C7I0 530 aa12.03□□□□□ -0.48
CCDC142-208ENST00000486335 LDLRAD1Q5T700 205 aa12.03□□□□□ -0.48
CCDC142-208ENST00000486335 ANKRD13DQ6ZTN6 518 aa12.03□□□□□ -0.48
CCDC142-208ENST00000486335 GCC1Q96CN9 775 aa12.03□□□□□ -0.48
CCDC142-208ENST00000486335 EYA3Q99504 573 aa12.03□□□□□ -0.48
CCDC142-208ENST00000486335 BABAM1Q9NWV8 329 aa12.03□□□□□ -0.48
CCDC142-208ENST00000486335 CHPF2Q9P2E5 772 aa12.03□□□□□ -0.48
CCDC142-208ENST00000486335 CHL1O00533 1208 aa12.02□□□□□ -0.49
CCDC142-208ENST00000486335 IRS4O14654 1257 aaPredicted RBP12.02□□□□□ -0.49
CCDC142-208ENST00000486335 FZD1Q9UP38 647 aa12.02□□□□□ -0.49
CCDC142-208ENST00000486335 TRIOBPQ9H2D6 2365 aa12.02□□□□□ -0.49
CCDC142-208ENST00000486335 CEP290O15078 2479 aa12.01□□□□□ -0.49
CCDC142-208ENST00000486335 WNT10BO00744 389 aa12.01□□□□□ -0.49
CCDC142-208ENST00000486335 UFL1O94874 794 aa12.01□□□□□ -0.49
CCDC142-208ENST00000486335 EN2P19622 333 aaPredicted RBP12.01□□□□□ -0.49
CCDC142-208ENST00000486335 RIPK4P57078 832 aa12.01□□□□□ -0.49
CCDC142-208ENST00000486335 DACT2Q5SW24 774 aa12.01□□□□□ -0.49
CCDC142-208ENST00000486335 SPRYD7Q5W111 196 aa12.01□□□□□ -0.49
CCDC142-208ENST00000486335 OTOP1Q7RTM1 612 aa12.01□□□□□ -0.49
CCDC142-208ENST00000486335 ZBED3Q96IU2 234 aaPredicted RBP12.01□□□□□ -0.49
CCDC142-208ENST00000486335 RANBP2P49792 3224 aaKnown RBP12.01□□□□□ -0.49
CCDC142-208ENST00000486335 USP17L3A6NCW0 530 aa12□□□□□ -0.49
CCDC142-208ENST00000486335 USP17L4A6NCW7 530 aa12□□□□□ -0.49
CCDC142-208ENST00000486335 USP17L1Q7RTZ2 530 aa12□□□□□ -0.49
CCDC142-208ENST00000486335 TXNRD3Q86VQ6 643 aa12□□□□□ -0.49
CCDC142-208ENST00000486335 JARID2Q92833 1246 aaPredicted RBP12□□□□□ -0.49
CCDC142-208ENST00000486335 GGA1Q9UJY5 639 aa12□□□□□ -0.49
CCDC142-208ENST00000486335 IGF2BP3O00425 579 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCDC142-208ENST00000486335 TMPOP42166 694 aaKnown RBP11.99□□□□□ -0.49
CCDC142-208ENST00000486335 ZBTB38Q8NAP3 1195 aaPredicted RBP11.99□□□□□ -0.49
CCDC142-208ENST00000486335 COLQQ9Y215 455 aaPredicted RBP11.99□□□□□ -0.49
CCDC142-208ENST00000486335 MYBBP1AQ9BQG0 1328 aaKnown RBP11.99□□□□□ -0.49
CCDC142-208ENST00000486335 GJA5P36382 358 aa11.98□□□□□ -0.49
CCDC142-208ENST00000486335 PRKG1Q13976 671 aa11.98□□□□□ -0.49
CCDC142-208ENST00000486335 PODNQ7Z5L7 613 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms