RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 FOXN1O15353 648 aa28.77■■■□□ 2.2
SREBF1-214ENST00000486311 SLC4A2P04920 1241 aa28.77■■■□□ 2.2
SREBF1-214ENST00000486311 DOK7Q18PE1 504 aa28.77■■■□□ 2.2
SREBF1-214ENST00000486311 G2E3Q7L622 706 aa28.77■■■□□ 2.2
SREBF1-214ENST00000486311 MICALL2Q8IY33 904 aa28.77■■■□□ 2.2
SREBF1-214ENST00000486311 ZC3H12CQ9C0D7 883 aaKnown RBP28.77■■■□□ 2.2
SREBF1-214ENST00000486311 WDR33Q9C0J8 1336 aaKnown RBP28.76■■■□□ 2.19
SREBF1-214ENST00000486311 SHTN1A0MZ66 631 aa28.76■■■□□ 2.19
SREBF1-214ENST00000486311 WBP1LQ9NX94 342 aa28.76■■■□□ 2.19
SREBF1-214ENST00000486311 ANKIB1Q9P2G1 1089 aa28.76■■■□□ 2.19
SREBF1-214ENST00000486311 GGA1Q9UJY5 639 aa28.76■■■□□ 2.19
SREBF1-214ENST00000486311 FANCIQ9NVI1 1328 aa28.75■■■□□ 2.19
SREBF1-214ENST00000486311 UFL1O94874 794 aa28.75■■■□□ 2.19
SREBF1-214ENST00000486311 RPS12P25398 132 aaKnown RBP28.75■■■□□ 2.19
SREBF1-214ENST00000486311 CTSWP56202 376 aa28.75■■■□□ 2.19
SREBF1-214ENST00000486311 ANKRD18AQ8IVF6 992 aa28.75■■■□□ 2.19
SREBF1-214ENST00000486311 WDR63Q8IWG1 891 aa28.75■■■□□ 2.19
SREBF1-214ENST00000486311 GLIS2Q9BZE0 524 aaPredicted RBP28.75■■■□□ 2.19
SREBF1-214ENST00000486311 RTL9Q8NET4 1388 aa28.75■■■□□ 2.19
SREBF1-214ENST00000486311 NEURL1BA8MQ27 555 aa28.74■■■□□ 2.19
SREBF1-214ENST00000486311 CWF19L2Q2TBE0 894 aaKnown RBP28.74■■■□□ 2.19
SREBF1-214ENST00000486311 AIDAQ96BJ3 306 aa28.74■■■□□ 2.19
SREBF1-214ENST00000486311 KCNQ5Q9NR82 932 aa28.74■■■□□ 2.19
SREBF1-214ENST00000486311 TLL2Q9Y6L7 1015 aa28.74■■■□□ 2.19
SREBF1-214ENST00000486311 TTLL11Q8NHH1 800 aa28.73■■■□□ 2.19
SREBF1-214ENST00000486311 FLIIQ13045 1269 aa28.72■■■□□ 2.19
SREBF1-214ENST00000486311 CDC37L1Q7L3B6 337 aa28.72■■■□□ 2.19
SREBF1-214ENST00000486311 CDC5LQ99459 802 aaKnown RBP28.72■■■□□ 2.19
SREBF1-214ENST00000486311 XDHP47989 1333 aa28.71■■■□□ 2.19
SREBF1-214ENST00000486311 H7C1W4 665 aa28.71■■■□□ 2.19
SREBF1-214ENST00000486311 CELF2O95319 508 aaKnown RBP28.71■■■□□ 2.19
SREBF1-214ENST00000486311 CTCFP49711 727 aaPredicted RBP28.71■■■□□ 2.19
SREBF1-214ENST00000486311 SAMD7Q7Z3H4 446 aa28.71■■■□□ 2.19
SREBF1-214ENST00000486311 CAPNS2Q96L46 248 aa28.71■■■□□ 2.19
SREBF1-214ENST00000486311 SALL2Q9Y467 1007 aaPredicted RBP28.71■■■□□ 2.19
SREBF1-214ENST00000486311 ECE1P42892 770 aa28.7■■■□□ 2.18
SREBF1-214ENST00000486311 PRDM10Q9NQV6 1147 aa28.7■■■□□ 2.18
SREBF1-214ENST00000486311 VAMP4O75379 141 aa28.69■■■□□ 2.18
SREBF1-214ENST00000486311 VIL1P09327 827 aaKnown RBP28.69■■■□□ 2.18
SREBF1-214ENST00000486311 MAP2K1Q02750 393 aaPredicted RBP28.69■■■□□ 2.18
SREBF1-214ENST00000486311 GREM2Q9H772 168 aa28.69■■■□□ 2.18
SREBF1-214ENST00000486311 TRPM7Q96QT4 1865 aa28.68■■■□□ 2.18
SREBF1-214ENST00000486311 G3V3G9 751 aa28.68■■■□□ 2.18
SREBF1-214ENST00000486311 ATP2B4P23634 1241 aa28.68■■■□□ 2.18
SREBF1-214ENST00000486311 GCKRQ14397 625 aa28.68■■■□□ 2.18
SREBF1-214ENST00000486311 TBC1D10BQ4KMP7 808 aaPredicted RBP28.68■■■□□ 2.18
SREBF1-214ENST00000486311 DCAF8Q5TAQ9 597 aa28.68■■■□□ 2.18
SREBF1-214ENST00000486311 CYP4F22Q6NT55 531 aa28.68■■■□□ 2.18
SREBF1-214ENST00000486311 PAXIP1Q6ZW49 1069 aaPredicted RBP28.68■■■□□ 2.18
SREBF1-214ENST00000486311 UBE3BQ7Z3V4 1068 aa28.68■■■□□ 2.18
SREBF1-214ENST00000486311 BSDC1Q9NW68 430 aaPredicted RBP28.68■■■□□ 2.18
SREBF1-214ENST00000486311 EGFRP00533 1210 aa28.67■■■□□ 2.18
SREBF1-214ENST00000486311 FKBP5Q13451 457 aaPredicted RBP28.67■■■□□ 2.18
SREBF1-214ENST00000486311 SAPCD2Q86UD0 394 aa28.67■■■□□ 2.18
SREBF1-214ENST00000486311 EXOSC9Q06265 439 aaKnown RBP28.66■■■□□ 2.18
SREBF1-214ENST00000486311 DNAAF4Q8WXU2 420 aa28.66■■■□□ 2.18
SREBF1-214ENST00000486311 PLA2G12BQ9BX93 195 aa28.66■■■□□ 2.18
SREBF1-214ENST00000486311 USP48Q86UV5 1035 aa28.65■■■□□ 2.18
SREBF1-214ENST00000486311 HHIPL1Q96JK4 782 aa28.65■■■□□ 2.18
SREBF1-214ENST00000486311 MINPP1Q9UNW1 487 aa28.65■■■□□ 2.18
SREBF1-214ENST00000486311 ZNF609O15014 1411 aa28.64■■■□□ 2.18
SREBF1-214ENST00000486311 CASP7P55210 303 aa28.64■■■□□ 2.18
SREBF1-214ENST00000486311 LINS1Q8NG48 757 aa28.64■■■□□ 2.18
SREBF1-214ENST00000486311 MYH16Q9H6N6 1097 aa28.64■■■□□ 2.18
SREBF1-214ENST00000486311 ZNF408Q9H9D4 720 aa28.64■■■□□ 2.18
SREBF1-214ENST00000486311 GRM1Q13255 1194 aa28.63■■■□□ 2.17
SREBF1-214ENST00000486311 RBM26Q5T8P6 1007 aaKnown RBP28.63■■■□□ 2.17
SREBF1-214ENST00000486311 RSBN1LQ6PCB5 846 aaPredicted RBP28.63■■■□□ 2.17
SREBF1-214ENST00000486311 SPINK5Q9NQ38 1064 aaPredicted RBP28.63■■■□□ 2.17
SREBF1-214ENST00000486311 PODNQ7Z5L7 613 aa28.62■■■□□ 2.17
SREBF1-214ENST00000486311 AGBL3Q8NEM8 1001 aa28.62■■■□□ 2.17
SREBF1-214ENST00000486311 THSD7BQ9C0I4 1608 aa28.61■■■□□ 2.17
SREBF1-214ENST00000486311 HSPA8P11142 646 aaKnown RBP28.61■■■□□ 2.17
SREBF1-214ENST00000486311 MAP2K2P36507 400 aa28.61■■■□□ 2.17
SREBF1-214ENST00000486311 LBX1P52954 281 aa28.61■■■□□ 2.17
SREBF1-214ENST00000486311 KIF4BQ2VIQ3 1234 aa28.61■■■□□ 2.17
SREBF1-214ENST00000486311 KRT26Q7Z3Y9 468 aa28.61■■■□□ 2.17
SREBF1-214ENST00000486311 MED23Q9ULK4 1368 aa28.61■■■□□ 2.17
SREBF1-214ENST00000486311 WTIPA6NIX2 430 aaPredicted RBP28.6■■■□□ 2.17
SREBF1-214ENST00000486311 IGHMBP2P38935 993 aaKnown RBP28.6■■■□□ 2.17
SREBF1-214ENST00000486311 ZNF280AP59817 542 aaPredicted RBP28.6■■■□□ 2.17
SREBF1-214ENST00000486311 DCPSQ96C86 337 aaKnown RBP28.6■■■□□ 2.17
SREBF1-214ENST00000486311 SCN9AQ15858 1988 aa28.59■■■□□ 2.17
SREBF1-214ENST00000486311 CSF1RP07333 972 aa28.59■■■□□ 2.17
SREBF1-214ENST00000486311 CCT4P50991 539 aaKnown RBP28.59■■■□□ 2.17
SREBF1-214ENST00000486311 DLK2Q6UY11 383 aa28.59■■■□□ 2.17
SREBF1-214ENST00000486311 FAM9BQ8IZU0 186 aa28.59■■■□□ 2.17
SREBF1-214ENST00000486311 GMLQ99445 158 aa28.59■■■□□ 2.17
SREBF1-214ENST00000486311 USP17L3A6NCW0 530 aa28.58■■■□□ 2.17
SREBF1-214ENST00000486311 USP17L4A6NCW7 530 aa28.58■■■□□ 2.17
SREBF1-214ENST00000486311 AOC2O75106 756 aa28.58■■■□□ 2.17
SREBF1-214ENST00000486311 ITGA6P23229 1130 aa28.58■■■□□ 2.17
SREBF1-214ENST00000486311 FAM161AQ3B820 660 aa28.58■■■□□ 2.17
SREBF1-214ENST00000486311 USP17L1Q7RTZ2 530 aa28.58■■■□□ 2.17
SREBF1-214ENST00000486311 ADM5C9JUS6 153 aa28.56■■■□□ 2.16
SREBF1-214ENST00000486311 BEGAINQ9BUH8 593 aa28.56■■■□□ 2.16
SREBF1-214ENST00000486311 GGA3Q9NZ52 723 aa28.56■■■□□ 2.16
SREBF1-214ENST00000486311 LEMD3Q9Y2U8 911 aa28.56■■■□□ 2.16
SREBF1-214ENST00000486311 USP17L8P0C7I0 530 aa28.55■■■□□ 2.16
SREBF1-214ENST00000486311 BEND3Q5T5X7 828 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms