RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 STYK1Q6J9G0 422 aa17.16■□□□□ 0.34
NELFCD-209ENST00000486263 CELF1Q92879 486 aaKnown RBP17.16■□□□□ 0.34
NELFCD-209ENST00000486263 BCL11AQ9H165 835 aa17.16■□□□□ 0.34
NELFCD-209ENST00000486263 BBOX1O75936 387 aa17.15■□□□□ 0.34
NELFCD-209ENST00000486263 CIAO1O76071 339 aa17.15■□□□□ 0.34
NELFCD-209ENST00000486263 IL15P40933 162 aaPredicted RBP17.15■□□□□ 0.34
NELFCD-209ENST00000486263 DALRD3Q5D0E6 543 aaKnown RBP17.15■□□□□ 0.34
NELFCD-209ENST00000486263 ANKRD45Q5TZF3 282 aa17.15■□□□□ 0.34
NELFCD-209ENST00000486263 CNKSR1Q969H4 720 aa17.15■□□□□ 0.34
NELFCD-209ENST00000486263 KIF1BPQ96EK5 621 aa17.15■□□□□ 0.34
NELFCD-209ENST00000486263 BCS1LQ9Y276 419 aa17.15■□□□□ 0.34
NELFCD-209ENST00000486263 DLEC1Q9Y238 1755 aa17.15■□□□□ 0.34
NELFCD-209ENST00000486263 ANKRD31Q8N7Z5 1873 aa17.14■□□□□ 0.33
NELFCD-209ENST00000486263 LRRC24Q50LG9 513 aa17.14■□□□□ 0.33
NELFCD-209ENST00000486263 METTL24Q5JXM2 366 aa17.14■□□□□ 0.33
NELFCD-209ENST00000486263 SMC5Q8IY18 1101 aa17.14■□□□□ 0.33
NELFCD-209ENST00000486263 PUS3Q9BZE2 481 aaKnown RBP17.14■□□□□ 0.33
NELFCD-209ENST00000486263 LRRCC1Q9C099 1032 aa17.14■□□□□ 0.33
NELFCD-209ENST00000486263 BSDC1Q9NW68 430 aaPredicted RBP17.14■□□□□ 0.33
NELFCD-209ENST00000486263 CEP126Q9P2H0 1117 aa17.14■□□□□ 0.33
NELFCD-209ENST00000486263 PPEF1O14829 653 aaPredicted RBP17.13■□□□□ 0.33
NELFCD-209ENST00000486263 TMC4Q7Z404 712 aa17.13■□□□□ 0.33
NELFCD-209ENST00000486263 MROH5Q6ZUA9 1318 aa17.13■□□□□ 0.33
NELFCD-209ENST00000486263 KDM2BQ8NHM5 1336 aa17.13■□□□□ 0.33
NELFCD-209ENST00000486263 RHPN1Q8TCX5 695 aa17.12■□□□□ 0.33
NELFCD-209ENST00000486263 RIPOR2Q9Y4F9 1068 aa17.12■□□□□ 0.33
NELFCD-209ENST00000486263 TFCP2Q12800 502 aa17.11■□□□□ 0.33
NELFCD-209ENST00000486263 ATG9AQ7Z3C6 839 aa17.11■□□□□ 0.33
NELFCD-209ENST00000486263 TTLL6Q8N841 843 aa17.11■□□□□ 0.33
NELFCD-209ENST00000486263 WWC3Q9ULE0 1092 aa17.11■□□□□ 0.33
NELFCD-209ENST00000486263 CLASRPQ8N2M8 674 aaKnown RBP17.1■□□□□ 0.33
NELFCD-209ENST00000486263 ANKRD2Q9GZV1 360 aa17.1■□□□□ 0.33
NELFCD-209ENST00000486263 ANKIB1Q9P2G1 1089 aa17.1■□□□□ 0.33
NELFCD-209ENST00000486263 MINPP1Q9UNW1 487 aa17.1■□□□□ 0.33
NELFCD-209ENST00000486263 AKAP2Q9Y2D5 859 aa17.1■□□□□ 0.33
NELFCD-209ENST00000486263 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
NELFCD-209ENST00000486263 SASH1O94885 1247 aa17.09■□□□□ 0.33
NELFCD-209ENST00000486263 KCNJ4P48050 445 aa17.09■□□□□ 0.33
NELFCD-209ENST00000486263 NUCB1Q02818 461 aa17.09■□□□□ 0.33
NELFCD-209ENST00000486263 CHRNDQ07001 517 aa17.09■□□□□ 0.33
NELFCD-209ENST00000486263 PRPF40BQ6NWY9 871 aaKnown RBP17.09■□□□□ 0.33
NELFCD-209ENST00000486263 CHD1LQ86WJ1 897 aa17.09■□□□□ 0.33
NELFCD-209ENST00000486263 SP8Q8IXZ3 490 aa17.09■□□□□ 0.33
NELFCD-209ENST00000486263 ZNF784Q8NCA9 323 aaPredicted RBP17.09■□□□□ 0.33
NELFCD-209ENST00000486263 HELBQ8NG08 1087 aaPredicted RBP17.09■□□□□ 0.33
NELFCD-209ENST00000486263 IL1RAPL2Q9NP60 686 aa17.09■□□□□ 0.33
NELFCD-209ENST00000486263 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
NELFCD-209ENST00000486263 LNPKQ9C0E8 428 aa17.08■□□□□ 0.32
NELFCD-209ENST00000486263 ATP6V0A2Q9Y487 856 aa17.08■□□□□ 0.32
NELFCD-209ENST00000486263 COL11A2P13942 1736 aaPredicted RBP17.07■□□□□ 0.32
NELFCD-209ENST00000486263 TAF5LO75529 589 aa17.07■□□□□ 0.32
NELFCD-209ENST00000486263 PDE8BO95263 885 aa17.07■□□□□ 0.32
NELFCD-209ENST00000486263 IFIT2P09913 472 aaKnown RBP17.07■□□□□ 0.32
NELFCD-209ENST00000486263 ARHGAP27Q6ZUM4 889 aa17.07■□□□□ 0.32
NELFCD-209ENST00000486263 NEUROD6Q96NK8 337 aa17.07■□□□□ 0.32
NELFCD-209ENST00000486263 SPEF2Q9C093 1822 aa17.07■□□□□ 0.32
NELFCD-209ENST00000486263 TAF1P21675 1872 aa17.06■□□□□ 0.32
NELFCD-209ENST00000486263 PUM3Q15397 648 aaKnown RBP17.06■□□□□ 0.32
NELFCD-209ENST00000486263 ATP2B3Q16720 1220 aa17.06■□□□□ 0.32
NELFCD-209ENST00000486263 AACSQ86V21 672 aa17.06■□□□□ 0.32
NELFCD-209ENST00000486263 GPR108Q9NPR9 543 aa17.06■□□□□ 0.32
NELFCD-209ENST00000486263 NSFL1CQ9UNZ2 370 aaKnown RBP17.06■□□□□ 0.32
NELFCD-209ENST00000486263 XDHP47989 1333 aa17.05■□□□□ 0.32
NELFCD-209ENST00000486263 IFIT1P09914 478 aaKnown RBP17.05■□□□□ 0.32
NELFCD-209ENST00000486263 SLC5A1P13866 664 aa17.05■□□□□ 0.32
NELFCD-209ENST00000486263 TNNI3KQ59H18 835 aa17.05■□□□□ 0.32
NELFCD-209ENST00000486263 GORABQ5T7V8 394 aa17.05■□□□□ 0.32
NELFCD-209ENST00000486263 CC2D2BQ6DHV5 1058 aa17.05■□□□□ 0.32
NELFCD-209ENST00000486263 FPGT-TNNI3KV9GXZ4 949 aa17.05■□□□□ 0.32
NELFCD-209ENST00000486263 C21orf2O43822 256 aa17.04■□□□□ 0.32
NELFCD-209ENST00000486263 ATP2B4P23634 1241 aa17.04■□□□□ 0.32
NELFCD-209ENST00000486263 SOGA3Q5TF21 947 aa17.04■□□□□ 0.32
NELFCD-209ENST00000486263 DPP8Q6V1X1 898 aaPredicted RBP17.04■□□□□ 0.32
NELFCD-209ENST00000486263 MPNDQ8N594 471 aa17.04■□□□□ 0.32
NELFCD-209ENST00000486263 LPIN2Q92539 896 aa17.04■□□□□ 0.32
NELFCD-209ENST00000486263 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
NELFCD-209ENST00000486263 GGA1Q9UJY5 639 aa17.04■□□□□ 0.32
NELFCD-209ENST00000486263 LEMD3Q9Y2U8 911 aa17.04■□□□□ 0.32
NELFCD-209ENST00000486263 SBF1O95248 1867 aa17.03■□□□□ 0.32
NELFCD-209ENST00000486263 A0A1B0GUL7 405 aa17.03■□□□□ 0.32
NELFCD-209ENST00000486263 C6orf229H3BNL8 230 aa17.03■□□□□ 0.32
NELFCD-209ENST00000486263 TIMM10P62072 90 aa17.03■□□□□ 0.32
NELFCD-209ENST00000486263 GPSM2P81274 684 aa17.03■□□□□ 0.32
NELFCD-209ENST00000486263 UBE4AQ14139 1066 aa17.03■□□□□ 0.32
NELFCD-209ENST00000486263 GRIPAP1Q4V328 841 aa17.03■□□□□ 0.32
NELFCD-209ENST00000486263 VGLL2Q8N8G2 317 aa17.03■□□□□ 0.32
NELFCD-209ENST00000486263 CCDC8Q9H0W5 538 aaPredicted RBP17.03■□□□□ 0.32
NELFCD-209ENST00000486263 COL4A1P02462 1669 aa17.03■□□□□ 0.32
NELFCD-209ENST00000486263 ZNF804BA4D1E1 1349 aa17.02■□□□□ 0.32
NELFCD-209ENST00000486263 UFL1O94874 794 aa17.02■□□□□ 0.32
NELFCD-209ENST00000486263 CCDC93Q567U6 631 aa17.02■□□□□ 0.32
NELFCD-209ENST00000486263 C16orf71Q8IYS4 520 aaPredicted RBP17.02■□□□□ 0.32
NELFCD-209ENST00000486263 EAF2Q96CJ1 260 aaPredicted RBP17.02■□□□□ 0.32
NELFCD-209ENST00000486263 PODXL2Q9NZ53 605 aa17.02■□□□□ 0.32
NELFCD-209ENST00000486263 CACNA1SQ13698 1873 aa17.01■□□□□ 0.31
NELFCD-209ENST00000486263 SLX4Q8IY92 1834 aa17.01■□□□□ 0.31
NELFCD-209ENST00000486263 OLFM4Q6UX06 510 aa17.01■□□□□ 0.31
NELFCD-209ENST00000486263 RTKN2Q8IZC4 609 aa17.01■□□□□ 0.31
NELFCD-209ENST00000486263 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.01■□□□□ 0.31
NELFCD-209ENST00000486263 SNAP23O00161 211 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms