RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 DBNDD1Q9H9R9 158 aa23.43■■□□□ 1.34
PRPF40A-209ENST00000486100 CREBZFQ9NS37 354 aa23.43■■□□□ 1.34
PRPF40A-209ENST00000486100 ADARB2Q9NS39 739 aaKnown RBP23.43■■□□□ 1.34
PRPF40A-209ENST00000486100 BSDC1Q9NW68 430 aaPredicted RBP23.43■■□□□ 1.34
PRPF40A-209ENST00000486100 UFL1O94874 794 aa23.42■■□□□ 1.34
PRPF40A-209ENST00000486100 JMYQ8N9B5 988 aa23.42■■□□□ 1.34
PRPF40A-209ENST00000486100 GPR101Q96P66 508 aaPredicted RBP23.42■■□□□ 1.34
PRPF40A-209ENST00000486100 BCL2L13Q9BXK5 485 aa23.42■■□□□ 1.34
PRPF40A-209ENST00000486100 CSF1RP07333 972 aa23.41■■□□□ 1.34
PRPF40A-209ENST00000486100 SLFN5Q08AF3 891 aa23.41■■□□□ 1.34
PRPF40A-209ENST00000486100 DOK7Q18PE1 504 aa23.41■■□□□ 1.34
PRPF40A-209ENST00000486100 XDHP47989 1333 aa23.4■■□□□ 1.34
PRPF40A-209ENST00000486100 ECE2O60344 883 aa23.4■■□□□ 1.34
PRPF40A-209ENST00000486100 ATP2B4P23634 1241 aa23.4■■□□□ 1.34
PRPF40A-209ENST00000486100 MINPP1Q9UNW1 487 aa23.4■■□□□ 1.34
PRPF40A-209ENST00000486100 PSMD14O00487 310 aa23.39■■□□□ 1.33
PRPF40A-209ENST00000486100 LTBP1Q14766 1721 aa23.39■■□□□ 1.33
PRPF40A-209ENST00000486100 CACNA1FO60840 1977 aa23.38■■□□□ 1.33
PRPF40A-209ENST00000486100 ADAMTSL1Q8N6G6 1762 aa23.38■■□□□ 1.33
PRPF40A-209ENST00000486100 G3V3G9 751 aa23.38■■□□□ 1.33
PRPF40A-209ENST00000486100 ITGA6P23229 1130 aa23.38■■□□□ 1.33
PRPF40A-209ENST00000486100 IGHMBP2P38935 993 aaKnown RBP23.38■■□□□ 1.33
PRPF40A-209ENST00000486100 DCAF8Q5TAQ9 597 aa23.38■■□□□ 1.33
PRPF40A-209ENST00000486100 DPF2Q92785 391 aa23.38■■□□□ 1.33
PRPF40A-209ENST00000486100 KCNQ5Q9NR82 932 aa23.38■■□□□ 1.33
PRPF40A-209ENST00000486100 CNOT7Q9UIV1 285 aaKnown RBP23.38■■□□□ 1.33
PRPF40A-209ENST00000486100 TMEM88BA6NKF7 163 aa23.37■■□□□ 1.33
PRPF40A-209ENST00000486100 MRPL50Q8N5N7 158 aaKnown RBP23.37■■□□□ 1.33
PRPF40A-209ENST00000486100 ZBTB12Q9Y330 459 aaPredicted RBP23.37■■□□□ 1.33
PRPF40A-209ENST00000486100 H7C1D1 291 aa23.36■■□□□ 1.33
PRPF40A-209ENST00000486100 ALDH1L1O75891 902 aa23.36■■□□□ 1.33
PRPF40A-209ENST00000486100 FAM161AQ3B820 660 aa23.36■■□□□ 1.33
PRPF40A-209ENST00000486100 SLC4A10Q6U841 1118 aa23.36■■□□□ 1.33
PRPF40A-209ENST00000486100 CDCA7LQ96GN5 454 aa23.36■■□□□ 1.33
PRPF40A-209ENST00000486100 RPS12P25398 132 aaKnown RBP23.35■■□□□ 1.33
PRPF40A-209ENST00000486100 FOXO4P98177 505 aa23.35■■□□□ 1.33
PRPF40A-209ENST00000486100 MPHOSPH8Q99549 860 aa23.35■■□□□ 1.33
PRPF40A-209ENST00000486100 SRCIN1Q9C0H9 1055 aa23.35■■□□□ 1.33
PRPF40A-209ENST00000486100 PGAP2Q9UHJ9 254 aa23.35■■□□□ 1.33
PRPF40A-209ENST00000486100 GRM8O00222 908 aa23.34■■□□□ 1.33
PRPF40A-209ENST00000486100 VIL1P09327 827 aaKnown RBP23.34■■□□□ 1.33
PRPF40A-209ENST00000486100 HIRAP54198 1017 aaPredicted RBP23.34■■□□□ 1.33
PRPF40A-209ENST00000486100 MICALL2Q8IY33 904 aa23.34■■□□□ 1.33
PRPF40A-209ENST00000486100 TRMT2AQ8IZ69 625 aaKnown RBP23.34■■□□□ 1.33
PRPF40A-209ENST00000486100 C9orf78Q9NZ63 289 aaPredicted RBP23.34■■□□□ 1.33
PRPF40A-209ENST00000486100 ANKRD18BA2A2Z9 1011 aa23.33■■□□□ 1.33
PRPF40A-209ENST00000486100 WTIPA6NIX2 430 aaPredicted RBP23.33■■□□□ 1.33
PRPF40A-209ENST00000486100 CCT4P50991 539 aaKnown RBP23.33■■□□□ 1.33
PRPF40A-209ENST00000486100 ZC3H15Q8WU90 426 aaKnown RBP23.33■■□□□ 1.33
PRPF40A-209ENST00000486100 SSH1Q8WYL5 1049 aa23.33■■□□□ 1.33
PRPF40A-209ENST00000486100 LEMD3Q9Y2U8 911 aa23.33■■□□□ 1.33
PRPF40A-209ENST00000486100 SHTN1A0MZ66 631 aa23.32■■□□□ 1.32
PRPF40A-209ENST00000486100 IFIT5Q13325 482 aaKnown RBP23.32■■□□□ 1.32
PRPF40A-209ENST00000486100 PODNQ7Z5L7 613 aa23.32■■□□□ 1.32
PRPF40A-209ENST00000486100 ANKRD2Q9GZV1 360 aa23.32■■□□□ 1.32
PRPF40A-209ENST00000486100 MKRN1Q9UHC7 482 aaKnown RBP23.32■■□□□ 1.32
PRPF40A-209ENST00000486100 LMBR1LQ6UX01 489 aa23.31■■□□□ 1.32
PRPF40A-209ENST00000486100 TRPM4Q8TD43 1214 aa23.31■■□□□ 1.32
PRPF40A-209ENST00000486100 PTPRCP08575 1304 aa23.31■■□□□ 1.32
PRPF40A-209ENST00000486100 ALDH1L2Q3SY69 923 aa23.3■■□□□ 1.32
PRPF40A-209ENST00000486100 EPHA10Q5JZY3 1008 aa23.3■■□□□ 1.32
PRPF40A-209ENST00000486100 CHMP3Q9Y3E7 222 aa23.3■■□□□ 1.32
PRPF40A-209ENST00000486100 CNTNAP1P78357 1384 aa23.29■■□□□ 1.32
PRPF40A-209ENST00000486100 MED23Q9ULK4 1368 aa23.29■■□□□ 1.32
PRPF40A-209ENST00000486100 FMR1Q06787 632 aaKnown RBP eCLIP23.29■■□□□ 1.322e-13■■■□□ 18.9
PRPF40A-209ENST00000486100 SAMD7Q7Z3H4 446 aa23.29■■□□□ 1.32
PRPF40A-209ENST00000486100 TRAF5O00463 557 aa23.28■■□□□ 1.32
PRPF40A-209ENST00000486100 CHRNDQ07001 517 aa23.28■■□□□ 1.32
PRPF40A-209ENST00000486100 AGBL3Q8NEM8 1001 aa23.28■■□□□ 1.32
PRPF40A-209ENST00000486100 ZNF804BA4D1E1 1349 aa23.28■■□□□ 1.32
PRPF40A-209ENST00000486100 USP17L3A6NCW0 530 aa23.27■■□□□ 1.32
PRPF40A-209ENST00000486100 USP17L4A6NCW7 530 aa23.27■■□□□ 1.32
PRPF40A-209ENST00000486100 CT47B1P0C2W7 299 aaPredicted RBP23.27■■□□□ 1.32
PRPF40A-209ENST00000486100 CCDC57Q2TAC2 916 aa23.27■■□□□ 1.32
PRPF40A-209ENST00000486100 RSBN1LQ6PCB5 846 aaPredicted RBP23.27■■□□□ 1.32
PRPF40A-209ENST00000486100 USP17L1Q7RTZ2 530 aa23.27■■□□□ 1.32
PRPF40A-209ENST00000486100 COA1Q9GZY4 146 aa23.27■■□□□ 1.32
PRPF40A-209ENST00000486100 MYH3P11055 1940 aa23.27■■□□□ 1.32
PRPF40A-209ENST00000486100 NBPF7P0C2Y1 421 aaPredicted RBP23.26■■□□□ 1.31
PRPF40A-209ENST00000486100 DEFB115Q30KQ5 88 aa23.26■■□□□ 1.31
PRPF40A-209ENST00000486100 TBC1D10BQ4KMP7 808 aaPredicted RBP23.26■■□□□ 1.31
PRPF40A-209ENST00000486100 RBM26Q5T8P6 1007 aaKnown RBP23.26■■□□□ 1.31
PRPF40A-209ENST00000486100 CST9Q5W186 159 aa23.26■■□□□ 1.31
PRPF40A-209ENST00000486100 CDC37L1Q7L3B6 337 aa23.26■■□□□ 1.31
PRPF40A-209ENST00000486100 TXNRD3Q86VQ6 643 aa23.26■■□□□ 1.31
PRPF40A-209ENST00000486100 GLIS2Q9BZE0 524 aaPredicted RBP23.26■■□□□ 1.31
PRPF40A-209ENST00000486100 UTYO14607 1347 aa23.26■■□□□ 1.31
PRPF40A-209ENST00000486100 RASSF10A6NK89 507 aa23.25■■□□□ 1.31
PRPF40A-209ENST00000486100 EGFRP00533 1210 aa23.25■■□□□ 1.31
PRPF40A-209ENST00000486100 SUCLG2Q96I99 432 aa23.25■■□□□ 1.31
PRPF40A-209ENST00000486100 ABT1Q9ULW3 272 aaKnown RBP23.25■■□□□ 1.31
PRPF40A-209ENST00000486100 KCNJ4P48050 445 aa23.24■■□□□ 1.31
PRPF40A-209ENST00000486100 VEGFBP49765 207 aa23.24■■□□□ 1.31
PRPF40A-209ENST00000486100 KAZALD1Q96I82 304 aa23.24■■□□□ 1.31
PRPF40A-209ENST00000486100 GMLQ99445 158 aa23.24■■□□□ 1.31
PRPF40A-209ENST00000486100 SMC4Q9NTJ3 1288 aa23.24■■□□□ 1.31
PRPF40A-209ENST00000486100 ZNF280AP59817 542 aaPredicted RBP23.23■■□□□ 1.31
PRPF40A-209ENST00000486100 TAF7LQ5H9L4 462 aa23.23■■□□□ 1.31
PRPF40A-209ENST00000486100 DIEXFQ68CQ4 756 aaKnown RBP23.23■■□□□ 1.31
PRPF40A-209ENST00000486100 LDHAL6AQ6ZMR3 332 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms