RNA–Protein interactions for RNA: ENST00000485980.1

PLXNB3-208, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-208ENST00000485980 GGA3Q9NZ52 723 aa20.15■□□□□ 0.82
PLXNB3-208ENST00000485980 SLC10A3P09131 477 aa20.14■□□□□ 0.81
PLXNB3-208ENST00000485980 RTL5Q5HYW3 569 aaPredicted RBP20.14■□□□□ 0.81
PLXNB3-208ENST00000485980 CTU1Q7Z7A3 348 aaKnown RBP20.14■□□□□ 0.81
PLXNB3-208ENST00000485980 BABAM1Q9NWV8 329 aa20.14■□□□□ 0.81
PLXNB3-208ENST00000485980 RTL9Q8NET4 1388 aa20.13■□□□□ 0.81
PLXNB3-208ENST00000485980 CDCA5Q96FF9 252 aa20.13■□□□□ 0.81
PLXNB3-208ENST00000485980 ZC3H12CQ9C0D7 883 aaKnown RBP20.13■□□□□ 0.81
PLXNB3-208ENST00000485980 PRKRIP1Q9H875 184 aaPredicted RBP20.13■□□□□ 0.81
PLXNB3-208ENST00000485980 LRRC37AA6NMS7 1700 aa20.13■□□□□ 0.81
PLXNB3-208ENST00000485980 ASTN2O75129 1339 aaPredicted RBP20.12■□□□□ 0.81
PLXNB3-208ENST00000485980 ATP5J2-PTCD1G3V325 749 aa20.12■□□□□ 0.81
PLXNB3-208ENST00000485980 SF3B3Q15393 1217 aaKnown RBP20.12■□□□□ 0.81
PLXNB3-208ENST00000485980 TBC1D16Q8TBP0 767 aa20.12■□□□□ 0.81
PLXNB3-208ENST00000485980 KRT24Q2M2I5 525 aa20.11■□□□□ 0.81
PLXNB3-208ENST00000485980 ANKRD13DQ6ZTN6 518 aa20.11■□□□□ 0.81
PLXNB3-208ENST00000485980 CHPF2Q9P2E5 772 aa20.11■□□□□ 0.81
PLXNB3-208ENST00000485980 LAS1LQ9Y4W2 734 aaKnown RBP20.11■□□□□ 0.81
PLXNB3-208ENST00000485980 ANP32CO43423 234 aa20.1■□□□□ 0.81
PLXNB3-208ENST00000485980 VIL1P09327 827 aaKnown RBP20.1■□□□□ 0.81
PLXNB3-208ENST00000485980 RPS8P62241 208 aaKnown RBP20.1■□□□□ 0.81
PLXNB3-208ENST00000485980 LMOD3Q0VAK6 560 aa20.1■□□□□ 0.81
PLXNB3-208ENST00000485980 ANGEL2Q5VTE6 544 aaKnown RBP20.1■□□□□ 0.81
PLXNB3-208ENST00000485980 REM2Q8IYK8 340 aaPredicted RBP20.1■□□□□ 0.81
PLXNB3-208ENST00000485980 PLBD2Q8NHP8 589 aa20.1■□□□□ 0.81
PLXNB3-208ENST00000485980 DDX60Q8IY21 1712 aaKnown RBP20.1■□□□□ 0.81
PLXNB3-208ENST00000485980 SCARF1Q14162 830 aa20.09■□□□□ 0.81
PLXNB3-208ENST00000485980 NEUROD2Q15784 382 aa20.09■□□□□ 0.81
PLXNB3-208ENST00000485980 RASAL3Q86YV0 1011 aa20.09■□□□□ 0.81
PLXNB3-208ENST00000485980 ISCA1Q9BUE6 129 aa20.09■□□□□ 0.81
PLXNB3-208ENST00000485980 ANKIB1Q9P2G1 1089 aa20.09■□□□□ 0.81
PLXNB3-208ENST00000485980 HDAC9Q9UKV0 1011 aa20.09■□□□□ 0.81
PLXNB3-208ENST00000485980 IRS4O14654 1257 aaPredicted RBP20.08■□□□□ 0.81
PLXNB3-208ENST00000485980 UFL1O94874 794 aa20.08■□□□□ 0.81
PLXNB3-208ENST00000485980 TMPOP42166 694 aaKnown RBP20.08■□□□□ 0.81
PLXNB3-208ENST00000485980 WDR43Q15061 677 aaKnown RBP eCLIP20.08■□□□□ 0.81
PLXNB3-208ENST00000485980 PRPF38BQ5VTL8 546 aaKnown RBP20.08■□□□□ 0.81
PLXNB3-208ENST00000485980 HPS5Q9UPZ3 1129 aa20.08■□□□□ 0.81
PLXNB3-208ENST00000485980 HDGFL1Q5TGJ6 251 aa20.07■□□□□ 0.8
PLXNB3-208ENST00000485980 GGA1Q9UJY5 639 aa20.06■□□□□ 0.8
PLXNB3-208ENST00000485980 SCAF8Q9UPN6 1271 aaKnown RBP20.06■□□□□ 0.8
PLXNB3-208ENST00000485980 SCN9AQ15858 1988 aa20.06■□□□□ 0.8
PLXNB3-208ENST00000485980 COL4A1P02462 1669 aa20.06■□□□□ 0.8
PLXNB3-208ENST00000485980 TBC1D8O95759 1140 aa20.05■□□□□ 0.8
PLXNB3-208ENST00000485980 FKBP1BP68106 108 aa20.05■□□□□ 0.8
PLXNB3-208ENST00000485980 RSBN1LQ6PCB5 846 aaPredicted RBP20.05■□□□□ 0.8
PLXNB3-208ENST00000485980 MOB2Q70IA6 237 aa20.05■□□□□ 0.8
PLXNB3-208ENST00000485980 AGBL3Q8NEM8 1001 aa20.05■□□□□ 0.8
PLXNB3-208ENST00000485980 SEC31BQ9NQW1 1179 aa20.05■□□□□ 0.8
PLXNB3-208ENST00000485980 DBF4Q9UBU7 674 aaPredicted RBP20.05■□□□□ 0.8
PLXNB3-208ENST00000485980 CHL1O00533 1208 aa20.04■□□□□ 0.8
PLXNB3-208ENST00000485980 ZNF280AP59817 542 aaPredicted RBP20.04■□□□□ 0.8
PLXNB3-208ENST00000485980 PKN2Q16513 984 aaKnown RBP20.04■□□□□ 0.8
PLXNB3-208ENST00000485980 PODXL2Q9NZ53 605 aa20.04■□□□□ 0.8
PLXNB3-208ENST00000485980 UBE2Q2LH0YL09 131 aa20.03■□□□□ 0.8
PLXNB3-208ENST00000485980 USP17L8P0C7I0 530 aa20.03■□□□□ 0.8
PLXNB3-208ENST00000485980 TTLL12Q14166 644 aaPredicted RBP20.03■□□□□ 0.8
PLXNB3-208ENST00000485980 DIEXFQ68CQ4 756 aaKnown RBP20.03■□□□□ 0.8
PLXNB3-208ENST00000485980 ZNF296Q8WUU4 475 aaPredicted RBP20.03■□□□□ 0.8
PLXNB3-208ENST00000485980 MYOZ2Q9NPC6 264 aa20.03■□□□□ 0.8
PLXNB3-208ENST00000485980 PRAMEF18Q5VWM3 479 aa20.02■□□□□ 0.8
PLXNB3-208ENST00000485980 CCDC146Q8IYE0 955 aa20.02■□□□□ 0.8
PLXNB3-208ENST00000485980 HYPKQ9NX55 129 aa20.02■□□□□ 0.8
PLXNB3-208ENST00000485980 RIC3Q7Z5B4 369 aa20.01■□□□□ 0.79
PLXNB3-208ENST00000485980 CCDC85AQ96PX6 553 aaPredicted RBP20.01■□□□□ 0.79
PLXNB3-208ENST00000485980 HSP90B1P14625 803 aaKnown RBP20■□□□□ 0.79
PLXNB3-208ENST00000485980 MKRN3Q13064 507 aaKnown RBP20■□□□□ 0.79
PLXNB3-208ENST00000485980 TRIM28Q13263 835 aaKnown RBP20■□□□□ 0.79
PLXNB3-208ENST00000485980 ZBTB38Q8NAP3 1195 aaPredicted RBP20■□□□□ 0.79
PLXNB3-208ENST00000485980 PAPPA2Q9BXP8 1791 aa20■□□□□ 0.79
PLXNB3-208ENST00000485980 PITPNM2Q9BZ72 1349 aa20■□□□□ 0.79
PLXNB3-208ENST00000485980 USP17L3A6NCW0 530 aa19.99■□□□□ 0.79
PLXNB3-208ENST00000485980 USP17L4A6NCW7 530 aa19.99■□□□□ 0.79
PLXNB3-208ENST00000485980 CCDC152Q4G0S7 254 aa19.99■□□□□ 0.79
PLXNB3-208ENST00000485980 USP17L1Q7RTZ2 530 aa19.99■□□□□ 0.79
PLXNB3-208ENST00000485980 GPR25O00155 361 aa19.98■□□□□ 0.79
PLXNB3-208ENST00000485980 HOXB7P09629 217 aa19.98■□□□□ 0.79
PLXNB3-208ENST00000485980 GOLGA2Q08379 1002 aa19.98■□□□□ 0.79
PLXNB3-208ENST00000485980 JARID2Q92833 1246 aaPredicted RBP19.98■□□□□ 0.79
PLXNB3-208ENST00000485980 GMLQ99445 158 aa19.98■□□□□ 0.79
PLXNB3-208ENST00000485980 NBPF9Q3BBW0 867 aa19.97■□□□□ 0.79
PLXNB3-208ENST00000485980 DUSP27Q5VZP5 1158 aa19.97■□□□□ 0.79
PLXNB3-208ENST00000485980 PODNQ7Z5L7 613 aa19.97■□□□□ 0.79
PLXNB3-208ENST00000485980 ANKRD18AQ8IVF6 992 aa19.97■□□□□ 0.79
PLXNB3-208ENST00000485980 FBXW7Q969H0 707 aa19.97■□□□□ 0.79
PLXNB3-208ENST00000485980 MYD88Q99836 296 aa19.97■□□□□ 0.79
PLXNB3-208ENST00000485980 XDHP47989 1333 aa19.97■□□□□ 0.79
PLXNB3-208ENST00000485980 ATP2B4P23634 1241 aa19.96■□□□□ 0.79
PLXNB3-208ENST00000485980 NF2P35240 595 aa19.96■□□□□ 0.79
PLXNB3-208ENST00000485980 TM4SF4P48230 202 aa19.96■□□□□ 0.79
PLXNB3-208ENST00000485980 FBXO46Q6PJ61 603 aaPredicted RBP19.96■□□□□ 0.79
PLXNB3-208ENST00000485980 TRIM35Q9UPQ4 493 aa19.96■□□□□ 0.79
PLXNB3-208ENST00000485980 ZNF609O15014 1411 aa19.95■□□□□ 0.78
PLXNB3-208ENST00000485980 PDE8AO60658 829 aa19.95■□□□□ 0.78
PLXNB3-208ENST00000485980 PRKG1Q13976 671 aa19.95■□□□□ 0.78
PLXNB3-208ENST00000485980 OGFOD1Q8N543 542 aa19.95■□□□□ 0.78
PLXNB3-208ENST00000485980 FKTNO75072 461 aa19.94■□□□□ 0.78
PLXNB3-208ENST00000485980 SREBF2Q12772 1141 aa19.94■□□□□ 0.78
PLXNB3-208ENST00000485980 MXD3Q9BW11 206 aa19.94■□□□□ 0.78
PLXNB3-208ENST00000485980 PHAXQ9H814 394 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms