RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 RPS12P25398 132 aaKnown RBP15.28■□□□□ 0.04
HLA-DOA-204ENST00000485901 NEXNQ0ZGT2 675 aa15.28■□□□□ 0.04
HLA-DOA-204ENST00000485901 NOGQ13253 232 aa15.28■□□□□ 0.04
HLA-DOA-204ENST00000485901 FKBP5Q13451 457 aaPredicted RBP15.28■□□□□ 0.04
HLA-DOA-204ENST00000485901 SF3B3Q15393 1217 aaKnown RBP15.28■□□□□ 0.04
HLA-DOA-204ENST00000485901 PAXIP1Q6ZW49 1069 aaPredicted RBP15.28■□□□□ 0.04
HLA-DOA-204ENST00000485901 CCDC191Q8NCU4 936 aa15.28■□□□□ 0.04
HLA-DOA-204ENST00000485901 MYD88Q99836 296 aa15.28■□□□□ 0.04
HLA-DOA-204ENST00000485901 LRRC37AA6NMS7 1700 aa15.28■□□□□ 0.04
HLA-DOA-204ENST00000485901 TRAF5O00463 557 aa15.27■□□□□ 0.04
HLA-DOA-204ENST00000485901 CNOT7Q9UIV1 285 aaKnown RBP15.27■□□□□ 0.04
HLA-DOA-204ENST00000485901 POLR2AP24928 1970 aaKnown RBP15.27■□□□□ 0.03
HLA-DOA-204ENST00000485901 CT47B1P0C2W7 299 aaPredicted RBP15.26■□□□□ 0.03
HLA-DOA-204ENST00000485901 CWC25Q9NXE8 425 aaPredicted RBP15.26■□□□□ 0.03
HLA-DOA-204ENST00000485901 CASP8AP2Q9UKL3 1982 aa15.25■□□□□ 0.03
HLA-DOA-204ENST00000485901 MLLT1Q03111 559 aaPredicted RBP15.25■□□□□ 0.03
HLA-DOA-204ENST00000485901 FMR1Q06787 632 aaKnown RBP eCLIP15.25■□□□□ 0.03
HLA-DOA-204ENST00000485901 WASHC4Q2M389 1173 aa15.25■□□□□ 0.03
HLA-DOA-204ENST00000485901 ZBTB38Q8NAP3 1195 aaPredicted RBP15.25■□□□□ 0.03
HLA-DOA-204ENST00000485901 DNAAF4Q8WXU2 420 aa15.25■□□□□ 0.03
HLA-DOA-204ENST00000485901 FAM89AQ96GI7 184 aa15.25■□□□□ 0.03
HLA-DOA-204ENST00000485901 EYA3Q99504 573 aa15.25■□□□□ 0.03
HLA-DOA-204ENST00000485901 HCLS1P14317 486 aaPredicted RBP15.24■□□□□ 0.03
HLA-DOA-204ENST00000485901 HIRAP54198 1017 aaPredicted RBP15.24■□□□□ 0.03
HLA-DOA-204ENST00000485901 REM2Q8IYK8 340 aaPredicted RBP15.24■□□□□ 0.03
HLA-DOA-204ENST00000485901 GLIS2Q9BZE0 524 aaPredicted RBP15.24■□□□□ 0.03
HLA-DOA-204ENST00000485901 PDE4DIPQ5VU43 2346 aa15.23■□□□□ 0.03
HLA-DOA-204ENST00000485901 DDX60Q8IY21 1712 aaKnown RBP15.23■□□□□ 0.03
HLA-DOA-204ENST00000485901 YDJCA8MPS7 323 aa15.23■□□□□ 0.03
HLA-DOA-204ENST00000485901 RAD17O75943 681 aa15.23■□□□□ 0.03
HLA-DOA-204ENST00000485901 SLC34A2O95436 690 aa15.23■□□□□ 0.03
HLA-DOA-204ENST00000485901 IGKV5-2P06315 115 aa15.23■□□□□ 0.03
HLA-DOA-204ENST00000485901 ALDH1L2Q3SY69 923 aa15.23■□□□□ 0.03
HLA-DOA-204ENST00000485901 MRPL50Q8N5N7 158 aaKnown RBP15.23■□□□□ 0.03
HLA-DOA-204ENST00000485901 CCDC102AQ96A19 550 aa15.23■□□□□ 0.03
HLA-DOA-204ENST00000485901 SAGE1Q9NXZ1 904 aa15.23■□□□□ 0.03
HLA-DOA-204ENST00000485901 CACNA1FO60840 1977 aa15.23■□□□□ 0.03
HLA-DOA-204ENST00000485901 IRS4O14654 1257 aaPredicted RBP15.22■□□□□ 0.03
HLA-DOA-204ENST00000485901 AOC2O75106 756 aa15.22■□□□□ 0.03
HLA-DOA-204ENST00000485901 PCCAP05165 728 aaPredicted RBP15.22■□□□□ 0.03
HLA-DOA-204ENST00000485901 RTL5Q5HYW3 569 aaPredicted RBP15.22■□□□□ 0.03
HLA-DOA-204ENST00000485901 MICALL2Q8IY33 904 aa15.22■□□□□ 0.03
HLA-DOA-204ENST00000485901 LINS1Q8NG48 757 aa15.22■□□□□ 0.03
HLA-DOA-204ENST00000485901 SSH1Q8WYL5 1049 aa15.22■□□□□ 0.03
HLA-DOA-204ENST00000485901 PODXL2Q9NZ53 605 aa15.22■□□□□ 0.03
HLA-DOA-204ENST00000485901 ZNF609O15014 1411 aa15.22■□□□□ 0.03
HLA-DOA-204ENST00000485901 DUOX1Q9NRD9 1551 aa15.22■□□□□ 0.03
HLA-DOA-204ENST00000485901 TAF1P21675 1872 aa15.22■□□□□ 0.03
HLA-DOA-204ENST00000485901 AKAP11Q9UKA4 1901 aa15.21■□□□□ 0.03
HLA-DOA-204ENST00000485901 NEURL1BA8MQ27 555 aa15.21■□□□□ 0.03
HLA-DOA-204ENST00000485901 FAM161AQ3B820 660 aa15.21■□□□□ 0.03
HLA-DOA-204ENST00000485901 TRPM4Q8TD43 1214 aa15.21■□□□□ 0.03
HLA-DOA-204ENST00000485901 NSFL1CQ9UNZ2 370 aaKnown RBP15.21■□□□□ 0.03
HLA-DOA-204ENST00000485901 ZBED9Q6R2W3 1325 aa15.2■□□□□ 0.02
HLA-DOA-204ENST00000485901 CCDC85CA6NKD9 419 aa15.2■□□□□ 0.02
HLA-DOA-204ENST00000485901 F6X3S4 739 aa15.2■□□□□ 0.02
HLA-DOA-204ENST00000485901 HUNKP57058 714 aa15.2■□□□□ 0.02
HLA-DOA-204ENST00000485901 GRM1Q13255 1194 aa15.2■□□□□ 0.02
HLA-DOA-204ENST00000485901 CWF19L2Q2TBE0 894 aaKnown RBP15.2■□□□□ 0.02
HLA-DOA-204ENST00000485901 RGMBQ6NW40 437 aa15.2■□□□□ 0.02
HLA-DOA-204ENST00000485901 C2orf69Q8N8R5 385 aa15.2■□□□□ 0.02
HLA-DOA-204ENST00000485901 DCPSQ96C86 337 aaKnown RBP15.2■□□□□ 0.02
HLA-DOA-204ENST00000485901 SMC4Q9NTJ3 1288 aa15.2■□□□□ 0.02
HLA-DOA-204ENST00000485901 PTPRCP08575 1304 aa15.19■□□□□ 0.02
HLA-DOA-204ENST00000485901 H7C1W4 665 aa15.19■□□□□ 0.02
HLA-DOA-204ENST00000485901 PSMD14O00487 310 aa15.19■□□□□ 0.02
HLA-DOA-204ENST00000485901 VIL1P09327 827 aaKnown RBP15.19■□□□□ 0.02
HLA-DOA-204ENST00000485901 MMP14P50281 582 aa15.19■□□□□ 0.02
HLA-DOA-204ENST00000485901 RPS8P62241 208 aaKnown RBP15.19■□□□□ 0.02
HLA-DOA-204ENST00000485901 GCKRQ14397 625 aa15.19■□□□□ 0.02
HLA-DOA-204ENST00000485901 KRT26Q7Z3Y9 468 aa15.19■□□□□ 0.02
HLA-DOA-204ENST00000485901 SLC51AQ86UW1 340 aa15.19■□□□□ 0.02
HLA-DOA-204ENST00000485901 MCOLN1Q9GZU1 580 aa15.19■□□□□ 0.02
HLA-DOA-204ENST00000485901 PDE8AO60658 829 aa15.18■□□□□ 0.02
HLA-DOA-204ENST00000485901 FKBP1BP68106 108 aa15.18■□□□□ 0.02
HLA-DOA-204ENST00000485901 BEND3Q5T5X7 828 aa15.18■□□□□ 0.02
HLA-DOA-204ENST00000485901 SLC4A10Q6U841 1118 aa15.18■□□□□ 0.02
HLA-DOA-204ENST00000485901 USP48Q86UV5 1035 aa15.18■□□□□ 0.02
HLA-DOA-204ENST00000485901 AGBL3Q8NEM8 1001 aa15.18■□□□□ 0.02
HLA-DOA-204ENST00000485901 JARID2Q92833 1246 aaPredicted RBP15.18■□□□□ 0.02
HLA-DOA-204ENST00000485901 CELF1Q92879 486 aaKnown RBP15.18■□□□□ 0.02
HLA-DOA-204ENST00000485901 ZC3H12CQ9C0D7 883 aaKnown RBP15.18■□□□□ 0.02
HLA-DOA-204ENST00000485901 GBA2Q9HCG7 927 aaPredicted RBP15.18■□□□□ 0.02
HLA-DOA-204ENST00000485901 POLLQ9UGP5 575 aa15.18■□□□□ 0.02
HLA-DOA-204ENST00000485901 C6orf229H3BNL8 230 aa15.17■□□□□ 0.02
HLA-DOA-204ENST00000485901 RARSP54136 660 aaKnown RBP15.17■□□□□ 0.02
HLA-DOA-204ENST00000485901 ZNF408Q9H9D4 720 aa15.17■□□□□ 0.02
HLA-DOA-204ENST00000485901 PCDH10Q9P2E7 1040 aa15.17■□□□□ 0.02
HLA-DOA-204ENST00000485901 PSME4Q14997 1843 aa15.17■□□□□ 0.02
HLA-DOA-204ENST00000485901 FAM155AB1AL88 458 aaPredicted RBP15.16■□□□□ 0.02
HLA-DOA-204ENST00000485901 ECE2O60344 883 aa15.16■□□□□ 0.02
HLA-DOA-204ENST00000485901 ALDH1L1O75891 902 aa15.16■□□□□ 0.02
HLA-DOA-204ENST00000485901 CCDC152Q4G0S7 254 aa15.16■□□□□ 0.02
HLA-DOA-204ENST00000485901 SAMD7Q7Z3H4 446 aa15.16■□□□□ 0.02
HLA-DOA-204ENST00000485901 UBE3BQ7Z3V4 1068 aa15.16■□□□□ 0.02
HLA-DOA-204ENST00000485901 SULF1Q8IWU6 871 aa15.16■□□□□ 0.02
HLA-DOA-204ENST00000485901 TBC1D16Q8TBP0 767 aa15.16■□□□□ 0.02
HLA-DOA-204ENST00000485901 SRCIN1Q9C0H9 1055 aa15.16■□□□□ 0.02
HLA-DOA-204ENST00000485901 DBNDD1Q9H9R9 158 aa15.16■□□□□ 0.02
HLA-DOA-204ENST00000485901 ZBTB12Q9Y330 459 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms