RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 PARP3Q9Y6F1 533 aa13.98□□□□□ -0.17
SND1-212ENST00000485871 C10orf71Q711Q0 1435 aa13.98□□□□□ -0.17
SND1-212ENST00000485871 OTUD7AQ8TE49 926 aaPredicted RBP13.97□□□□□ -0.17
SND1-212ENST00000485871 BRIP1Q9BX63 1249 aa13.97□□□□□ -0.17
SND1-212ENST00000485871 IL1RAPL2Q9NP60 686 aa13.97□□□□□ -0.17
SND1-212ENST00000485871 LTBP1Q14766 1721 aa13.97□□□□□ -0.17
SND1-212ENST00000485871 ZNF609O15014 1411 aa13.97□□□□□ -0.17
SND1-212ENST00000485871 GOLGB1Q14789 3259 aaKnown RBP13.96□□□□□ -0.17
SND1-212ENST00000485871 IL15P40933 162 aaPredicted RBP13.96□□□□□ -0.17
SND1-212ENST00000485871 PLEKHM2Q8IWE5 1019 aa13.96□□□□□ -0.17
SND1-212ENST00000485871 VGLL2Q8N8G2 317 aa13.96□□□□□ -0.17
SND1-212ENST00000485871 CELF1Q92879 486 aaKnown RBP13.96□□□□□ -0.17
SND1-212ENST00000485871 BRCA1P38398 1863 aaKnown RBP13.95□□□□□ -0.18
SND1-212ENST00000485871 HOXA10P31260 410 aaPredicted RBP13.95□□□□□ -0.18
SND1-212ENST00000485871 RGS3P49796 1198 aa13.95□□□□□ -0.18
SND1-212ENST00000485871 TFCP2Q12800 502 aa13.95□□□□□ -0.18
SND1-212ENST00000485871 OS9Q13438 667 aaPredicted RBP13.95□□□□□ -0.18
SND1-212ENST00000485871 LDHAL6AQ6ZMR3 332 aa13.95□□□□□ -0.18
SND1-212ENST00000485871 EAF2Q96CJ1 260 aaPredicted RBP13.95□□□□□ -0.18
SND1-212ENST00000485871 CDC5LQ99459 802 aaKnown RBP13.95□□□□□ -0.18
SND1-212ENST00000485871 GPR108Q9NPR9 543 aa13.95□□□□□ -0.18
SND1-212ENST00000485871 AK9Q5TCS8 1911 aa13.94□□□□□ -0.18
SND1-212ENST00000485871 NPHP1O15259 732 aa13.94□□□□□ -0.18
SND1-212ENST00000485871 TAF7LQ5H9L4 462 aa13.94□□□□□ -0.18
SND1-212ENST00000485871 OSBPL3Q9H4L5 887 aa13.94□□□□□ -0.18
SND1-212ENST00000485871 STAP2Q9UGK3 403 aa13.94□□□□□ -0.18
SND1-212ENST00000485871 SLX4Q8IY92 1834 aa13.93□□□□□ -0.18
SND1-212ENST00000485871 SRGNP10124 158 aa13.93□□□□□ -0.18
SND1-212ENST00000485871 TNNI3KQ59H18 835 aa13.93□□□□□ -0.18
SND1-212ENST00000485871 ANKRD18AQ8IVF6 992 aa13.93□□□□□ -0.18
SND1-212ENST00000485871 CLASRPQ8N2M8 674 aaKnown RBP13.93□□□□□ -0.18
SND1-212ENST00000485871 FPGT-TNNI3KV9GXZ4 949 aa13.93□□□□□ -0.18
SND1-212ENST00000485871 AKAP11Q9UKA4 1901 aa13.92□□□□□ -0.18
SND1-212ENST00000485871 IGHMBP2P38935 993 aaKnown RBP13.92□□□□□ -0.18
SND1-212ENST00000485871 PDE1AP54750 535 aa13.92□□□□□ -0.18
SND1-212ENST00000485871 RPS8P62241 208 aaKnown RBP13.92□□□□□ -0.18
SND1-212ENST00000485871 GRAPQ13588 217 aa13.92□□□□□ -0.18
SND1-212ENST00000485871 DDX46Q7L014 1031 aaKnown RBP13.92□□□□□ -0.18
SND1-212ENST00000485871 GRAPLQ8TC17 118 aaPredicted RBP13.92□□□□□ -0.18
SND1-212ENST00000485871 CRAMP1Q96RY5 1269 aa13.92□□□□□ -0.18
SND1-212ENST00000485871 BSDC1Q9NW68 430 aaPredicted RBP13.92□□□□□ -0.18
SND1-212ENST00000485871 AOX1Q06278 1338 aa13.91□□□□□ -0.18
SND1-212ENST00000485871 MROH5Q6ZUA9 1318 aa13.91□□□□□ -0.18
SND1-212ENST00000485871 PDE8BO95263 885 aa13.91□□□□□ -0.18
SND1-212ENST00000485871 MX1P20591 662 aa13.91□□□□□ -0.18
SND1-212ENST00000485871 FGFR2P21802 821 aa13.91□□□□□ -0.18
SND1-212ENST00000485871 PDE6BP35913 854 aa13.91□□□□□ -0.18
SND1-212ENST00000485871 AACSQ86V21 672 aa13.91□□□□□ -0.18
SND1-212ENST00000485871 CNNM1Q9NRU3 951 aa13.91□□□□□ -0.18
SND1-212ENST00000485871 TLR7Q9NYK1 1049 aaKnown RBP13.91□□□□□ -0.18
SND1-212ENST00000485871 CEP126Q9P2H0 1117 aa13.91□□□□□ -0.18
SND1-212ENST00000485871 ZBTB47Q9UFB7 747 aaPredicted RBP13.91□□□□□ -0.18
SND1-212ENST00000485871 DBNLQ9UJU6 430 aaKnown RBP13.91□□□□□ -0.18
SND1-212ENST00000485871 GSPT1P15170 499 aaKnown RBP13.9□□□□□ -0.18
SND1-212ENST00000485871 APLP1P51693 650 aa13.9□□□□□ -0.18
SND1-212ENST00000485871 CHRNDQ07001 517 aa13.9□□□□□ -0.18
SND1-212ENST00000485871 METTL24Q5JXM2 366 aa13.9□□□□□ -0.18
SND1-212ENST00000485871 SLC51AQ86UW1 340 aa13.9□□□□□ -0.18
SND1-212ENST00000485871 PI4K2BQ8TCG2 481 aa13.9□□□□□ -0.18
SND1-212ENST00000485871 RPGRQ92834 1020 aaKnown RBP13.9□□□□□ -0.18
SND1-212ENST00000485871 MPHOSPH8Q99549 860 aa13.9□□□□□ -0.18
SND1-212ENST00000485871 CCDC8Q9H0W5 538 aaPredicted RBP13.9□□□□□ -0.18
SND1-212ENST00000485871 MINPP1Q9UNW1 487 aa13.9□□□□□ -0.18
SND1-212ENST00000485871 DUOX1Q9NRD9 1551 aa13.89□□□□□ -0.19
SND1-212ENST00000485871 A0A1B0GUL7 405 aa13.89□□□□□ -0.19
SND1-212ENST00000485871 NPR1P16066 1061 aa13.89□□□□□ -0.19
SND1-212ENST00000485871 TTC22Q5TAA0 569 aa13.89□□□□□ -0.19
SND1-212ENST00000485871 RBM17Q96I25 401 aaKnown RBP13.89□□□□□ -0.19
SND1-212ENST00000485871 DBNDD2Q9BQY9 259 aa13.89□□□□□ -0.19
SND1-212ENST00000485871 TTC41PQ6P2S7 1318 aa13.89□□□□□ -0.19
SND1-212ENST00000485871 MYH13Q9UKX3 1938 aa13.88□□□□□ -0.19
SND1-212ENST00000485871 TIMM10P62072 90 aa13.88□□□□□ -0.19
SND1-212ENST00000485871 ATP2B3Q16720 1220 aa13.88□□□□□ -0.19
SND1-212ENST00000485871 BMP2KLQ5H9B9 411 aa13.88□□□□□ -0.19
SND1-212ENST00000485871 TSHZ3Q63HK5 1081 aa13.88□□□□□ -0.19
SND1-212ENST00000485871 STYK1Q6J9G0 422 aa13.88□□□□□ -0.19
SND1-212ENST00000485871 HELBQ8NG08 1087 aaPredicted RBP13.88□□□□□ -0.19
SND1-212ENST00000485871 MASTLQ96GX5 879 aa13.88□□□□□ -0.19
SND1-212ENST00000485871 AKAP2Q9Y2D5 859 aa13.88□□□□□ -0.19
SND1-212ENST00000485871 CD2APQ9Y5K6 639 aa13.88□□□□□ -0.19
SND1-212ENST00000485871 SNED1Q8TER0 1413 aa13.88□□□□□ -0.19
SND1-212ENST00000485871 IRS2Q9Y4H2 1338 aa13.88□□□□□ -0.19
SND1-212ENST00000485871 SNAP23O00161 211 aa13.87□□□□□ -0.19
SND1-212ENST00000485871 TAF5LO75529 589 aa13.87□□□□□ -0.19
SND1-212ENST00000485871 BBOX1O75936 387 aa13.87□□□□□ -0.19
SND1-212ENST00000485871 IFIT2P09913 472 aaKnown RBP13.87□□□□□ -0.19
SND1-212ENST00000485871 ADORA1P30542 326 aa13.87□□□□□ -0.19
SND1-212ENST00000485871 ANP32AP39687 249 aaKnown RBP13.87□□□□□ -0.19
SND1-212ENST00000485871 C2CD5Q86YS7 1000 aa13.87□□□□□ -0.19
SND1-212ENST00000485871 ECHDC1Q9NTX5 307 aa13.87□□□□□ -0.19
SND1-212ENST00000485871 MYO5AQ9Y4I1 1855 aaKnown RBP13.87□□□□□ -0.19
SND1-212ENST00000485871 CAPN15O75808 1086 aa13.86□□□□□ -0.19
SND1-212ENST00000485871 KCNA3P22001 575 aa13.86□□□□□ -0.19
SND1-212ENST00000485871 CHRNA5P30532 468 aa13.86□□□□□ -0.19
SND1-212ENST00000485871 PUM3Q15397 648 aaKnown RBP13.86□□□□□ -0.19
SND1-212ENST00000485871 XAGE2Q96GT9 111 aa13.86□□□□□ -0.19
SND1-212ENST00000485871 BCL11AQ9H165 835 aa13.86□□□□□ -0.19
SND1-212ENST00000485871 DOCK2Q92608 1830 aa13.85□□□□□ -0.19
SND1-212ENST00000485871 WTIPA6NIX2 430 aaPredicted RBP13.85□□□□□ -0.19
SND1-212ENST00000485871 H0YIN7 160 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 248.4 ms