RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 BCL2L12Q9HB09 334 aa11.65□□□□□ -0.54
CTSA-208ENST00000485627 ECHDC1Q9NTX5 307 aa11.65□□□□□ -0.54
CTSA-208ENST00000485627 TFCP2L1Q9NZI6 479 aa11.65□□□□□ -0.54
CTSA-208ENST00000485627 WWC3Q9ULE0 1092 aa11.65□□□□□ -0.54
CTSA-208ENST00000485627 HSPA6P17066 643 aa11.64□□□□□ -0.55
CTSA-208ENST00000485627 POLD1P28340 1107 aa11.64□□□□□ -0.55
CTSA-208ENST00000485627 MFAP1P55081 439 aaKnown RBP11.64□□□□□ -0.55
CTSA-208ENST00000485627 MSL1Q68DK7 614 aa11.64□□□□□ -0.55
CTSA-208ENST00000485627 LDHAL6AQ6ZMR3 332 aa11.64□□□□□ -0.55
CTSA-208ENST00000485627 CNTROBQ8N137 903 aa11.64□□□□□ -0.55
CTSA-208ENST00000485627 EAF2Q96CJ1 260 aaPredicted RBP11.64□□□□□ -0.55
CTSA-208ENST00000485627 GPR108Q9NPR9 543 aa11.64□□□□□ -0.55
CTSA-208ENST00000485627 CNNM1Q9NRU3 951 aa11.64□□□□□ -0.55
CTSA-208ENST00000485627 AKAP2Q9Y2D5 859 aa11.64□□□□□ -0.55
CTSA-208ENST00000485627 TAF1LQ8IZX4 1826 aa11.64□□□□□ -0.55
CTSA-208ENST00000485627 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
CTSA-208ENST00000485627 IGHMBP2P38935 993 aaKnown RBP11.63□□□□□ -0.55
CTSA-208ENST00000485627 ERFEQ4G0M1 354 aa11.63□□□□□ -0.55
CTSA-208ENST00000485627 LRRC24Q50LG9 513 aa11.63□□□□□ -0.55
CTSA-208ENST00000485627 TNNI3KQ59H18 835 aa11.63□□□□□ -0.55
CTSA-208ENST00000485627 METTL24Q5JXM2 366 aa11.63□□□□□ -0.55
CTSA-208ENST00000485627 TBC1D9Q6ZT07 1266 aa11.63□□□□□ -0.55
CTSA-208ENST00000485627 ATG9AQ7Z3C6 839 aa11.63□□□□□ -0.55
CTSA-208ENST00000485627 FLAD1Q8NFF5 587 aa11.63□□□□□ -0.55
CTSA-208ENST00000485627 NEUROD6Q96NK8 337 aa11.63□□□□□ -0.55
CTSA-208ENST00000485627 MPHOSPH8Q99549 860 aa11.63□□□□□ -0.55
CTSA-208ENST00000485627 FPGT-TNNI3KV9GXZ4 949 aa11.63□□□□□ -0.55
CTSA-208ENST00000485627 SCN7AQ01118 1682 aa11.62□□□□□ -0.55
CTSA-208ENST00000485627 AMIGO3Q86WK7 504 aa11.62□□□□□ -0.55
CTSA-208ENST00000485627 NLRP3Q96P20 1036 aa11.62□□□□□ -0.55
CTSA-208ENST00000485627 CDC5LQ99459 802 aaKnown RBP11.62□□□□□ -0.55
CTSA-208ENST00000485627 PUS3Q9BZE2 481 aaKnown RBP11.62□□□□□ -0.55
CTSA-208ENST00000485627 GPBP1L1Q9HC44 474 aaPredicted RBP11.62□□□□□ -0.55
CTSA-208ENST00000485627 CARMIL3Q8ND23 1372 aa11.62□□□□□ -0.55
CTSA-208ENST00000485627 TUBGCP6Q96RT7 1819 aa11.62□□□□□ -0.55
CTSA-208ENST00000485627 SEC24BO95487 1268 aa11.61□□□□□ -0.55
CTSA-208ENST00000485627 GORABQ5T7V8 394 aa11.61□□□□□ -0.55
CTSA-208ENST00000485627 PI4K2BQ8TCG2 481 aa11.61□□□□□ -0.55
CTSA-208ENST00000485627 RTL9Q8NET4 1388 aa11.6□□□□□ -0.55
CTSA-208ENST00000485627 MAP4K4O95819 1239 aaPredicted RBP11.6□□□□□ -0.55
CTSA-208ENST00000485627 GYS1P13807 737 aa11.6□□□□□ -0.55
CTSA-208ENST00000485627 NFIXQ14938 502 aa11.6□□□□□ -0.55
CTSA-208ENST00000485627 SLC10A5Q5PT55 438 aa11.6□□□□□ -0.55
CTSA-208ENST00000485627 CNBD1Q8NA66 436 aa11.6□□□□□ -0.55
CTSA-208ENST00000485627 DDRGK1Q96HY6 314 aa11.6□□□□□ -0.55
CTSA-208ENST00000485627 RIPOR2Q9Y4F9 1068 aa11.6□□□□□ -0.55
CTSA-208ENST00000485627 MROH5Q6ZUA9 1318 aa11.6□□□□□ -0.55
CTSA-208ENST00000485627 A0A1B0GUL7 405 aa11.59□□□□□ -0.55
CTSA-208ENST00000485627 GRIN3BO60391 1043 aa11.59□□□□□ -0.55
CTSA-208ENST00000485627 TIMM10P62072 90 aa11.59□□□□□ -0.55
CTSA-208ENST00000485627 ST5P78524 1137 aa11.59□□□□□ -0.55
CTSA-208ENST00000485627 PLCB2Q00722 1185 aa11.59□□□□□ -0.55
CTSA-208ENST00000485627 SF3B3Q15393 1217 aaKnown RBP11.59□□□□□ -0.55
CTSA-208ENST00000485627 CCDC158Q5M9N0 1113 aa11.59□□□□□ -0.55
CTSA-208ENST00000485627 POTEDQ86YR6 584 aa11.59□□□□□ -0.55
CTSA-208ENST00000485627 ANKRD18AQ8IVF6 992 aa11.59□□□□□ -0.55
CTSA-208ENST00000485627 SLC16A10Q8TF71 515 aa11.59□□□□□ -0.55
CTSA-208ENST00000485627 EVI5LQ96CN4 794 aa11.59□□□□□ -0.55
CTSA-208ENST00000485627 DBNDD2Q9BQY9 259 aa11.59□□□□□ -0.55
CTSA-208ENST00000485627 C22orf23Q9BZE7 217 aa11.59□□□□□ -0.55
CTSA-208ENST00000485627 BOLA2Q9H3K6 86 aa11.59□□□□□ -0.55
CTSA-208ENST00000485627 TLR7Q9NYK1 1049 aaKnown RBP11.59□□□□□ -0.55
CTSA-208ENST00000485627 DBNLQ9UJU6 430 aaKnown RBP11.59□□□□□ -0.55
CTSA-208ENST00000485627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.59□□□□□ -0.55
CTSA-208ENST00000485627 COL24A1Q17RW2 1714 aa11.58□□□□□ -0.56
CTSA-208ENST00000485627 HIP1O00291 1037 aa11.58□□□□□ -0.56
CTSA-208ENST00000485627 REC8O95072 547 aa11.58□□□□□ -0.56
CTSA-208ENST00000485627 ATP5JP18859 108 aa11.58□□□□□ -0.56
CTSA-208ENST00000485627 ATP2B3Q16720 1220 aa11.58□□□□□ -0.56
CTSA-208ENST00000485627 COL23A1Q86Y22 540 aaPredicted RBP11.58□□□□□ -0.56
CTSA-208ENST00000485627 NLGN1Q8N2Q7 840 aa11.58□□□□□ -0.56
CTSA-208ENST00000485627 SEC31BQ9NQW1 1179 aa11.58□□□□□ -0.56
CTSA-208ENST00000485627 MYH3P11055 1940 aa11.58□□□□□ -0.56
CTSA-208ENST00000485627 SERPINB2P05120 415 aa11.57□□□□□ -0.56
CTSA-208ENST00000485627 CHMLP26374 656 aa11.57□□□□□ -0.56
CTSA-208ENST00000485627 TTC39AQ5SRH9 613 aa11.57□□□□□ -0.56
CTSA-208ENST00000485627 DDX46Q7L014 1031 aaKnown RBP11.57□□□□□ -0.56
CTSA-208ENST00000485627 RUFY2Q8WXA3 655 aa11.57□□□□□ -0.56
CTSA-208ENST00000485627 TBC1D32Q96NH3 1257 aa11.57□□□□□ -0.56
CTSA-208ENST00000485627 DIAPH3Q9NSV4 1193 aa11.57□□□□□ -0.56
CTSA-208ENST00000485627 ZNF609O15014 1411 aa11.57□□□□□ -0.56
CTSA-208ENST00000485627 UBR3Q6ZT12 1888 aa11.57□□□□□ -0.56
CTSA-208ENST00000485627 ABCC12Q96J65 1359 aa11.56□□□□□ -0.56
CTSA-208ENST00000485627 PDE8BO95263 885 aa11.56□□□□□ -0.56
CTSA-208ENST00000485627 C4AP0C0L4 1744 aa11.56□□□□□ -0.56
CTSA-208ENST00000485627 SLC5A1P13866 664 aa11.56□□□□□ -0.56
CTSA-208ENST00000485627 TM4SF1P30408 202 aa11.56□□□□□ -0.56
CTSA-208ENST00000485627 PUM3Q15397 648 aaKnown RBP11.56□□□□□ -0.56
CTSA-208ENST00000485627 CCDC24Q8N4L8 307 aa11.56□□□□□ -0.56
CTSA-208ENST00000485627 XAGE2Q96GT9 111 aa11.56□□□□□ -0.56
CTSA-208ENST00000485627 DNAJC2Q99543 621 aaKnown RBP11.56□□□□□ -0.56
CTSA-208ENST00000485627 FSD1Q9BTV5 496 aa11.56□□□□□ -0.56
CTSA-208ENST00000485627 DAXXQ9UER7 740 aaPredicted RBP11.56□□□□□ -0.56
CTSA-208ENST00000485627 LAMB2P55268 1798 aa11.55□□□□□ -0.56
CTSA-208ENST00000485627 KIF3CO14782 793 aa11.55□□□□□ -0.56
CTSA-208ENST00000485627 IFIT1P09914 478 aaKnown RBP11.55□□□□□ -0.56
CTSA-208ENST00000485627 PRR5LQ6MZQ0 368 aa11.55□□□□□ -0.56
CTSA-208ENST00000485627 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.55□□□□□ -0.56
CTSA-208ENST00000485627 LPIN2Q92539 896 aa11.55□□□□□ -0.56
CTSA-208ENST00000485627 RPGRQ92834 1020 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms