RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 C2orf69Q8N8R5 385 aa17.82■□□□□ 0.44
SMARCD3-211ENST00000485592 TBC1D16Q8TBP0 767 aa17.82■□□□□ 0.44
SMARCD3-211ENST00000485592 ZC3H12CQ9C0D7 883 aaKnown RBP17.82■□□□□ 0.44
SMARCD3-211ENST00000485592 MCOLN1Q9GZU1 580 aa17.82■□□□□ 0.44
SMARCD3-211ENST00000485592 GBA2Q9HCG7 927 aaPredicted RBP17.82■□□□□ 0.44
SMARCD3-211ENST00000485592 COL4A1P02462 1669 aa17.82■□□□□ 0.44
SMARCD3-211ENST00000485592 POLR2AP24928 1970 aaKnown RBP17.82■□□□□ 0.44
SMARCD3-211ENST00000485592 RTL9Q8NET4 1388 aa17.81■□□□□ 0.44
SMARCD3-211ENST00000485592 KIF4BQ2VIQ3 1234 aa17.81■□□□□ 0.44
SMARCD3-211ENST00000485592 RGMBQ6NW40 437 aa17.81■□□□□ 0.44
SMARCD3-211ENST00000485592 ZBTB38Q8NAP3 1195 aaPredicted RBP17.81■□□□□ 0.44
SMARCD3-211ENST00000485592 MBIPQ9NS73 344 aa17.81■□□□□ 0.44
SMARCD3-211ENST00000485592 EGFRP00533 1210 aa17.8■□□□□ 0.44
SMARCD3-211ENST00000485592 PODXL2Q9NZ53 605 aa17.8■□□□□ 0.44
SMARCD3-211ENST00000485592 ANKIB1Q9P2G1 1089 aa17.8■□□□□ 0.44
SMARCD3-211ENST00000485592 ADAMTS8Q9UP79 889 aa17.8■□□□□ 0.44
SMARCD3-211ENST00000485592 SCN9AQ15858 1988 aa17.79■□□□□ 0.44
SMARCD3-211ENST00000485592 ADM5C9JUS6 153 aa17.79■□□□□ 0.44
SMARCD3-211ENST00000485592 UFL1O94874 794 aa17.79■□□□□ 0.44
SMARCD3-211ENST00000485592 RGS19P49795 217 aa17.79■□□□□ 0.44
SMARCD3-211ENST00000485592 DDX10Q13206 875 aaKnown RBP17.79■□□□□ 0.44
SMARCD3-211ENST00000485592 DGKZQ13574 1117 aa17.79■□□□□ 0.44
SMARCD3-211ENST00000485592 DLK2Q6UY11 383 aa17.79■□□□□ 0.44
SMARCD3-211ENST00000485592 SULF1Q8IWU6 871 aa17.79■□□□□ 0.44
SMARCD3-211ENST00000485592 CCDC102AQ96A19 550 aa17.79■□□□□ 0.44
SMARCD3-211ENST00000485592 KCNQ5Q9NR82 932 aa17.79■□□□□ 0.44
SMARCD3-211ENST00000485592 GGA1Q9UJY5 639 aa17.79■□□□□ 0.44
SMARCD3-211ENST00000485592 PSME4Q14997 1843 aa17.78■□□□□ 0.44
SMARCD3-211ENST00000485592 VIL1P09327 827 aaKnown RBP17.78■□□□□ 0.44
SMARCD3-211ENST00000485592 CALD1Q05682 793 aaKnown RBP17.78■□□□□ 0.44
SMARCD3-211ENST00000485592 CCDC152Q4G0S7 254 aa17.78■□□□□ 0.44
SMARCD3-211ENST00000485592 ZIC5Q96T25 663 aa17.78■□□□□ 0.44
SMARCD3-211ENST00000485592 MYD88Q99836 296 aa17.78■□□□□ 0.44
SMARCD3-211ENST00000485592 GGA3Q9NZ52 723 aa17.78■□□□□ 0.44
SMARCD3-211ENST00000485592 AKAP11Q9UKA4 1901 aa17.77■□□□□ 0.44
SMARCD3-211ENST00000485592 ZNF157P51786 506 aaPredicted RBP17.77■□□□□ 0.44
SMARCD3-211ENST00000485592 CCDC191Q8NCU4 936 aa17.77■□□□□ 0.44
SMARCD3-211ENST00000485592 SEC31BQ9NQW1 1179 aa17.77■□□□□ 0.44
SMARCD3-211ENST00000485592 SAGE1Q9NXZ1 904 aa17.77■□□□□ 0.44
SMARCD3-211ENST00000485592 ZNF609O15014 1411 aa17.76■□□□□ 0.43
SMARCD3-211ENST00000485592 FAM155AB1AL88 458 aaPredicted RBP17.76■□□□□ 0.43
SMARCD3-211ENST00000485592 PDE8AO60658 829 aa17.76■□□□□ 0.43
SMARCD3-211ENST00000485592 PCCAP05165 728 aaPredicted RBP17.76■□□□□ 0.43
SMARCD3-211ENST00000485592 PHAXQ9H814 394 aaKnown RBP17.76■□□□□ 0.43
SMARCD3-211ENST00000485592 IFT57Q9NWB7 429 aa17.76■□□□□ 0.43
SMARCD3-211ENST00000485592 DDX58O95786 925 aaKnown RBP17.75■□□□□ 0.43
SMARCD3-211ENST00000485592 ZNF853P0CG23 659 aa17.75■□□□□ 0.43
SMARCD3-211ENST00000485592 GNAI1P63096 354 aa17.75■□□□□ 0.43
SMARCD3-211ENST00000485592 AGBL3Q8NEM8 1001 aa17.75■□□□□ 0.43
SMARCD3-211ENST00000485592 CHMP4AQ9BY43 222 aa17.75■□□□□ 0.43
SMARCD3-211ENST00000485592 CWC25Q9NXE8 425 aaPredicted RBP17.75■□□□□ 0.43
SMARCD3-211ENST00000485592 XDHP47989 1333 aa17.74■□□□□ 0.43
SMARCD3-211ENST00000485592 ELL2O00472 640 aaPredicted RBP17.74■□□□□ 0.43
SMARCD3-211ENST00000485592 SLC10A3P09131 477 aa17.74■□□□□ 0.43
SMARCD3-211ENST00000485592 KIF23Q02241 960 aaPredicted RBP17.74■□□□□ 0.43
SMARCD3-211ENST00000485592 RSBN1LQ6PCB5 846 aaPredicted RBP17.74■□□□□ 0.43
SMARCD3-211ENST00000485592 ANKRD18AQ8IVF6 992 aa17.74■□□□□ 0.43
SMARCD3-211ENST00000485592 CDCA5Q96FF9 252 aa17.74■□□□□ 0.43
SMARCD3-211ENST00000485592 ZNF280AP59817 542 aaPredicted RBP17.73■□□□□ 0.43
SMARCD3-211ENST00000485592 ANGEL2Q5VTE6 544 aaKnown RBP17.73■□□□□ 0.43
SMARCD3-211ENST00000485592 CCDC85AQ96PX6 553 aaPredicted RBP17.73■□□□□ 0.43
SMARCD3-211ENST00000485592 PAPPA2Q9BXP8 1791 aa17.72■□□□□ 0.43
SMARCD3-211ENST00000485592 ATP2B4P23634 1241 aa17.72■□□□□ 0.43
SMARCD3-211ENST00000485592 SCARF1Q14162 830 aa17.72■□□□□ 0.43
SMARCD3-211ENST00000485592 CCDC30Q5VVM6 783 aa17.72■□□□□ 0.43
SMARCD3-211ENST00000485592 METTL22Q9BUU2 404 aaPredicted RBP17.72■□□□□ 0.43
SMARCD3-211ENST00000485592 MYH3P11055 1940 aa17.72■□□□□ 0.43
SMARCD3-211ENST00000485592 ASTN2O75129 1339 aaPredicted RBP17.72■□□□□ 0.43
SMARCD3-211ENST00000485592 SPEF2Q9C093 1822 aa17.71■□□□□ 0.43
SMARCD3-211ENST00000485592 APAF1O14727 1248 aa17.71■□□□□ 0.43
SMARCD3-211ENST00000485592 TRPA1O75762 1119 aa17.71■□□□□ 0.43
SMARCD3-211ENST00000485592 SLC34A2O95436 690 aa17.71■□□□□ 0.43
SMARCD3-211ENST00000485592 USP17L8P0C7I0 530 aa17.71■□□□□ 0.43
SMARCD3-211ENST00000485592 PODNQ7Z5L7 613 aa17.71■□□□□ 0.43
SMARCD3-211ENST00000485592 REM2Q8IYK8 340 aaPredicted RBP17.71■□□□□ 0.43
SMARCD3-211ENST00000485592 CDC5LQ99459 802 aaKnown RBP17.71■□□□□ 0.43
SMARCD3-211ENST00000485592 MYOZ2Q9NPC6 264 aa17.71■□□□□ 0.43
SMARCD3-211ENST00000485592 RNF186Q9NXI6 227 aa17.71■□□□□ 0.43
SMARCD3-211ENST00000485592 PITPNM2Q9BZ72 1349 aa17.71■□□□□ 0.42
SMARCD3-211ENST00000485592 USP17L3A6NCW0 530 aa17.7■□□□□ 0.42
SMARCD3-211ENST00000485592 USP17L4A6NCW7 530 aa17.7■□□□□ 0.42
SMARCD3-211ENST00000485592 FKBP1BP68106 108 aa17.7■□□□□ 0.42
SMARCD3-211ENST00000485592 USP17L1Q7RTZ2 530 aa17.7■□□□□ 0.42
SMARCD3-211ENST00000485592 JARID2Q92833 1246 aaPredicted RBP17.7■□□□□ 0.42
SMARCD3-211ENST00000485592 CTSWP56202 376 aa17.69■□□□□ 0.42
SMARCD3-211ENST00000485592 RASAL3Q86YV0 1011 aa17.69■□□□□ 0.42
SMARCD3-211ENST00000485592 MAP3K2Q9Y2U5 619 aa17.69■□□□□ 0.42
SMARCD3-211ENST00000485592 MED23Q9ULK4 1368 aa17.68■□□□□ 0.42
SMARCD3-211ENST00000485592 NEXNQ0ZGT2 675 aa17.68■□□□□ 0.42
SMARCD3-211ENST00000485592 C8orf58Q8NAV2 365 aa17.68■□□□□ 0.42
SMARCD3-211ENST00000485592 CSRNP1Q96S65 589 aa17.68■□□□□ 0.42
SMARCD3-211ENST00000485592 GMLQ99445 158 aa17.68■□□□□ 0.42
SMARCD3-211ENST00000485592 PRKRIP1Q9H875 184 aaPredicted RBP17.68■□□□□ 0.42
SMARCD3-211ENST00000485592 ZEB1P37275 1124 aaPredicted RBP17.66■□□□□ 0.42
SMARCD3-211ENST00000485592 KSR2Q6VAB6 950 aa17.66■□□□□ 0.42
SMARCD3-211ENST00000485592 OGFOD1Q8N543 542 aa17.66■□□□□ 0.42
SMARCD3-211ENST00000485592 FBXW7Q969H0 707 aa17.66■□□□□ 0.42
SMARCD3-211ENST00000485592 STK31Q9BXU1 1019 aa17.66■□□□□ 0.42
SMARCD3-211ENST00000485592 BSDC1Q9NW68 430 aaPredicted RBP17.66■□□□□ 0.42
SMARCD3-211ENST00000485592 MYO3BQ8WXR4 1341 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms