RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 NFATC2IPQ8NCF5 419 aa8.2□□□□□ -1.1
VPS8-223ENST00000485024 CD68P34810 354 aaPredicted RBP8.19□□□□□ -1.1
VPS8-223ENST00000485024 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.19□□□□□ -1.1
VPS8-223ENST00000485024 MFSD14AQ96MC6 490 aa8.19□□□□□ -1.1
VPS8-223ENST00000485024 NSUN5Q96P11 429 aaKnown RBP8.19□□□□□ -1.1
VPS8-223ENST00000485024 PPME1Q9Y570 386 aa8.19□□□□□ -1.1
VPS8-223ENST00000485024 ATAD2Q6PL18 1390 aa8.19□□□□□ -1.1
VPS8-223ENST00000485024 LINC01387J3KSC0 135 aa8.18□□□□□ -1.1
VPS8-223ENST00000485024 BMP3P12645 472 aa8.18□□□□□ -1.1
VPS8-223ENST00000485024 ARID4AP29374 1257 aaPredicted RBP8.18□□□□□ -1.1
VPS8-223ENST00000485024 TXNDC11Q6PKC3 985 aa8.18□□□□□ -1.1
VPS8-223ENST00000485024 TRIM50Q86XT4 487 aa8.18□□□□□ -1.1
VPS8-223ENST00000485024 TP53INP2Q8IXH6 220 aa8.18□□□□□ -1.1
VPS8-223ENST00000485024 KCNF1Q9H3M0 494 aa8.18□□□□□ -1.1
VPS8-223ENST00000485024 PAPLNO95428 1278 aa8.17□□□□□ -1.1
VPS8-223ENST00000485024 VSIG10LQ86VR7 867 aa8.17□□□□□ -1.1
VPS8-223ENST00000485024 FBXL18Q96ME1 805 aa8.17□□□□□ -1.1
VPS8-223ENST00000485024 C11orf16Q9NQ32 467 aa8.17□□□□□ -1.1
VPS8-223ENST00000485024 KLK14Q9P0G3 267 aa8.17□□□□□ -1.1
VPS8-223ENST00000485024 GHRHP01286 108 aa8.16□□□□□ -1.1
VPS8-223ENST00000485024 FOSL1P15407 271 aa8.16□□□□□ -1.1
VPS8-223ENST00000485024 PREPP48147 710 aa8.16□□□□□ -1.1
VPS8-223ENST00000485024 ARSDP51689 593 aa8.16□□□□□ -1.1
VPS8-223ENST00000485024 CHMP7Q8WUX9 453 aaPredicted RBP8.16□□□□□ -1.1
VPS8-223ENST00000485024 SCG3Q8WXD2 468 aaKnown RBP8.16□□□□□ -1.1
VPS8-223ENST00000485024 MUC3BQ9H195 1237 aa8.16□□□□□ -1.1
VPS8-223ENST00000485024 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.16□□□□□ -1.1
VPS8-223ENST00000485024 UBASH3BQ8TF42 649 aa8.15□□□□□ -1.1
VPS8-223ENST00000485024 CARD10Q9BWT7 1032 aa8.15□□□□□ -1.1
VPS8-223ENST00000485024 USP20Q9Y2K6 914 aa8.15□□□□□ -1.1
VPS8-223ENST00000485024 DKK1O94907 266 aa8.14□□□□□ -1.11
VPS8-223ENST00000485024 F13BP05160 661 aa8.14□□□□□ -1.11
VPS8-223ENST00000485024 ZNF865P0CJ78 1059 aaPredicted RBP8.14□□□□□ -1.11
VPS8-223ENST00000485024 FOXD4L4Q8WXT5 416 aaPredicted RBP8.14□□□□□ -1.11
VPS8-223ENST00000485024 KRTAP9-3Q9BYQ3 159 aa8.14□□□□□ -1.11
VPS8-223ENST00000485024 LEMD3Q9Y2U8 911 aa8.14□□□□□ -1.11
VPS8-223ENST00000485024 DDX3YO15523 660 aaKnown RBP8.13□□□□□ -1.11
VPS8-223ENST00000485024 MMP20O60882 483 aa8.13□□□□□ -1.11
VPS8-223ENST00000485024 ADAM11O75078 769 aa8.13□□□□□ -1.11
VPS8-223ENST00000485024 HOXD8P13378 290 aaPredicted RBP8.13□□□□□ -1.11
VPS8-223ENST00000485024 RASA1P20936 1047 aa8.13□□□□□ -1.11
VPS8-223ENST00000485024 ATP1A2P50993 1020 aa8.13□□□□□ -1.11
VPS8-223ENST00000485024 DUOXA2Q1HG44 320 aa8.13□□□□□ -1.11
VPS8-223ENST00000485024 ALG2Q9H553 416 aa8.13□□□□□ -1.11
VPS8-223ENST00000485024 PSAPP07602 524 aa8.12□□□□□ -1.11
VPS8-223ENST00000485024 ADAMTSL4Q6UY14 1074 aa8.12□□□□□ -1.11
VPS8-223ENST00000485024 SHISA5Q8N114 240 aa8.12□□□□□ -1.11
VPS8-223ENST00000485024 CARMIL2Q6F5E8 1435 aa8.12□□□□□ -1.11
VPS8-223ENST00000485024 EGFRP00533 1210 aa8.11□□□□□ -1.11
VPS8-223ENST00000485024 SIX5Q8N196 739 aa8.11□□□□□ -1.11
VPS8-223ENST00000485024 CACTIN-AS1Q8N1I8 211 aa8.11□□□□□ -1.11
VPS8-223ENST00000485024 FBXL6Q8N531 539 aa8.11□□□□□ -1.11
VPS8-223ENST00000485024 OGFOD1Q8N543 542 aa8.11□□□□□ -1.11
VPS8-223ENST00000485024 GAS2L2Q8NHY3 880 aa8.11□□□□□ -1.11
VPS8-223ENST00000485024 RBSNQ9H1K0 784 aa8.11□□□□□ -1.11
VPS8-223ENST00000485024 ATG3Q9NT62 314 aa8.11□□□□□ -1.11
VPS8-223ENST00000485024 MICAL2O94851 1124 aa8.1□□□□□ -1.11
VPS8-223ENST00000485024 LARGE2Q8N3Y3 721 aa8.1□□□□□ -1.11
VPS8-223ENST00000485024 PAK6Q9NQU5 681 aaPredicted RBP8.1□□□□□ -1.11
VPS8-223ENST00000485024 RTCBQ9Y3I0 505 aaKnown RBP8.1□□□□□ -1.11
VPS8-223ENST00000485024 PALM3A6NDB9 673 aaPredicted RBP8.09□□□□□ -1.11
VPS8-223ENST00000485024 SART1O43290 800 aaKnown RBP8.09□□□□□ -1.11
VPS8-223ENST00000485024 XYLBO75191 536 aa8.09□□□□□ -1.11
VPS8-223ENST00000485024 CDC25BP30305 580 aa8.09□□□□□ -1.11
VPS8-223ENST00000485024 SOX18P35713 384 aa8.09□□□□□ -1.11
VPS8-223ENST00000485024 DGKZQ13574 1117 aa8.09□□□□□ -1.11
VPS8-223ENST00000485024 LACRTQ9GZZ8 138 aa8.09□□□□□ -1.11
VPS8-223ENST00000485024 HIF3AQ9Y2N7 669 aa8.09□□□□□ -1.11
VPS8-223ENST00000485024 USP17L3A6NCW0 530 aa8.08□□□□□ -1.12
VPS8-223ENST00000485024 USP17L4A6NCW7 530 aa8.08□□□□□ -1.12
VPS8-223ENST00000485024 OPLAHO14841 1288 aa8.08□□□□□ -1.12
VPS8-223ENST00000485024 FSCN2O14926 492 aa8.08□□□□□ -1.12
VPS8-223ENST00000485024 ANKRD34AQ69YU3 496 aa8.08□□□□□ -1.12
VPS8-223ENST00000485024 USP17L2Q6R6M4 530 aa8.08□□□□□ -1.12
VPS8-223ENST00000485024 USP17L1Q7RTZ2 530 aa8.08□□□□□ -1.12
VPS8-223ENST00000485024 PLEKHM2Q8IWE5 1019 aa8.08□□□□□ -1.12
VPS8-223ENST00000485024 FLCNQ8NFG4 579 aa8.08□□□□□ -1.12
VPS8-223ENST00000485024 ZNF594Q96JF6 807 aaPredicted RBP8.08□□□□□ -1.12
VPS8-223ENST00000485024 OSBPL1AQ9BXW6 950 aa8.08□□□□□ -1.12
VPS8-223ENST00000485024 NCANO14594 1321 aa8.07□□□□□ -1.12
VPS8-223ENST00000485024 MAP4P27816 1152 aaKnown RBP8.07□□□□□ -1.12
VPS8-223ENST00000485024 ATP11AP98196 1134 aa8.07□□□□□ -1.12
VPS8-223ENST00000485024 NEUROD2Q15784 382 aa8.07□□□□□ -1.12
VPS8-223ENST00000485024 CPSF6Q16630 551 aaKnown RBP eCLIP8.06□□□□□ -1.12
VPS8-223ENST00000485024 SGO2Q562F6 1265 aa8.06□□□□□ -1.12
VPS8-223ENST00000485024 KLHL23Q8NBE8 558 aa8.06□□□□□ -1.12
VPS8-223ENST00000485024 AGBL5Q8NDL9 886 aa8.06□□□□□ -1.12
VPS8-223ENST00000485024 GIMAP7Q8NHV1 300 aa8.06□□□□□ -1.12
VPS8-223ENST00000485024 BSDC1Q9NW68 430 aaPredicted RBP8.06□□□□□ -1.12
VPS8-223ENST00000485024 FARP2O94887 1054 aaPredicted RBP8.05□□□□□ -1.12
VPS8-223ENST00000485024 CDC27P30260 824 aa8.05□□□□□ -1.12
VPS8-223ENST00000485024 KLHDC7BQ96G42 594 aa8.05□□□□□ -1.12
VPS8-223ENST00000485024 QTRT2Q9H974 415 aaKnown RBP8.05□□□□□ -1.12
VPS8-223ENST00000485024 PRRG2O14669 202 aa8.04□□□□□ -1.12
VPS8-223ENST00000485024 LGR5O75473 907 aa8.04□□□□□ -1.12
VPS8-223ENST00000485024 COL13A1Q5TAT6 717 aaPredicted RBP8.04□□□□□ -1.12
VPS8-223ENST00000485024 KCNMB2Q9Y691 235 aa8.04□□□□□ -1.12
VPS8-223ENST00000485024 EPHA1P21709 976 aa8.03□□□□□ -1.12
VPS8-223ENST00000485024 PKN1Q16512 942 aa8.03□□□□□ -1.12
VPS8-223ENST00000485024 TMEM132AQ24JP5 1023 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms