RNA–Protein interactions for RNA: ENST00000484979.5

PCDH17-202, Transcript of protocadherin 17, humanhuman

TSL 1 (best)

Gene PCDH17, Length 4,471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-202ENST00000484979 SLAIN2Q9P270 581 aa18.32■□□□□ 0.52
PCDH17-202ENST00000484979 SHANK2Q9UPX8 1470 aa18.32■□□□□ 0.52
PCDH17-202ENST00000484979 YEATS4O95619 227 aa18.32■□□□□ 0.52
PCDH17-202ENST00000484979 ESPNB1AK53 854 aa18.32■□□□□ 0.52
PCDH17-202ENST00000484979 EZRP15311 586 aaKnown RBP18.32■□□□□ 0.52
PCDH17-202ENST00000484979 CALML3P27482 149 aa18.32■□□□□ 0.52
PCDH17-202ENST00000484979 TTC6Q86TZ1 520 aa18.32■□□□□ 0.52
PCDH17-202ENST00000484979 TSPYL6Q8N831 410 aa18.32■□□□□ 0.52
PCDH17-202ENST00000484979 TBC1D32Q96NH3 1257 aa18.31■□□□□ 0.52
PCDH17-202ENST00000484979 KIAA0556O60303 1618 aa18.31■□□□□ 0.52
PCDH17-202ENST00000484979 KIF5CO60282 957 aa18.31■□□□□ 0.52
PCDH17-202ENST00000484979 CCDC174Q6PII3 467 aa18.31■□□□□ 0.52
PCDH17-202ENST00000484979 USP37Q86T82 979 aa18.31■□□□□ 0.52
PCDH17-202ENST00000484979 SBNO1A3KN83 1393 aa18.3■□□□□ 0.52
PCDH17-202ENST00000484979 TNPO1Q92973 898 aaKnown RBP18.3■□□□□ 0.52
PCDH17-202ENST00000484979 CENPHQ9H3R5 247 aa18.3■□□□□ 0.52
PCDH17-202ENST00000484979 ARHGEF10O15013 1369 aa18.3■□□□□ 0.52
PCDH17-202ENST00000484979 RNF113AO15541 343 aaKnown RBP18.3■□□□□ 0.52
PCDH17-202ENST00000484979 KRT24Q2M2I5 525 aa18.3■□□□□ 0.52
PCDH17-202ENST00000484979 PLBD2Q8NHP8 589 aa18.3■□□□□ 0.52
PCDH17-202ENST00000484979 TMX3Q96JJ7 454 aa18.3■□□□□ 0.52
PCDH17-202ENST00000484979 PAFAH1B1P43034 410 aa18.3■□□□□ 0.52
PCDH17-202ENST00000484979 ZNF165P49910 485 aa18.3■□□□□ 0.52
PCDH17-202ENST00000484979 UBE2HP62256 183 aa18.3■□□□□ 0.52
PCDH17-202ENST00000484979 TAX1BP1Q86VP1 789 aa18.3■□□□□ 0.52
PCDH17-202ENST00000484979 KCNG4Q8TDN1 519 aa18.3■□□□□ 0.52
PCDH17-202ENST00000484979 C6orf50Q9HD87 102 aa18.3■□□□□ 0.52
PCDH17-202ENST00000484979 PIK3C2GO75747 1445 aa18.3■□□□□ 0.52
PCDH17-202ENST00000484979 PTPN14Q15678 1187 aa18.29■□□□□ 0.52
PCDH17-202ENST00000484979 ENOX2Q16206 610 aaKnown RBP18.29■□□□□ 0.52
PCDH17-202ENST00000484979 TCEANC2Q96MN5 208 aa18.29■□□□□ 0.52
PCDH17-202ENST00000484979 NUP88Q99567 741 aaPredicted RBP18.29■□□□□ 0.52
PCDH17-202ENST00000484979 GBP3Q9H0R5 595 aa18.29■□□□□ 0.52
PCDH17-202ENST00000484979 BIN1O00499 593 aa18.29■□□□□ 0.52
PCDH17-202ENST00000484979 TNNI2P48788 182 aa18.29■□□□□ 0.52
PCDH17-202ENST00000484979 LEKR1Q6ZMV7 388 aa18.29■□□□□ 0.52
PCDH17-202ENST00000484979 GDPD2Q9HCC8 539 aa18.29■□□□□ 0.52
PCDH17-202ENST00000484979 KIF4BQ2VIQ3 1234 aa18.29■□□□□ 0.52
PCDH17-202ENST00000484979 RMND1Q9NWS8 449 aa18.29■□□□□ 0.52
PCDH17-202ENST00000484979 PPFIA3O75145 1194 aa18.29■□□□□ 0.52
PCDH17-202ENST00000484979 CEP85Q6P2H3 762 aa18.29■□□□□ 0.52
PCDH17-202ENST00000484979 SMARCC2Q8TAQ2 1214 aa18.29■□□□□ 0.52
PCDH17-202ENST00000484979 LRRC2Q9BYS8 371 aa18.29■□□□□ 0.52
PCDH17-202ENST00000484979 TCOF1Q13428 1488 aaKnown RBP18.28■□□□□ 0.52
PCDH17-202ENST00000484979 PRC1O43663 620 aa18.28■□□□□ 0.52
PCDH17-202ENST00000484979 NAPAP54920 295 aa18.28■□□□□ 0.52
PCDH17-202ENST00000484979 STX1AQ16623 288 aa18.28■□□□□ 0.52
PCDH17-202ENST00000484979 SYKP43405 635 aa18.28■□□□□ 0.52
PCDH17-202ENST00000484979 RBM26Q5T8P6 1007 aaKnown RBP18.28■□□□□ 0.52
PCDH17-202ENST00000484979 HEATR3Q7Z4Q2 680 aa18.28■□□□□ 0.52
PCDH17-202ENST00000484979 FAM89AQ96GI7 184 aa18.28■□□□□ 0.52
PCDH17-202ENST00000484979 RBM17Q96I25 401 aaKnown RBP18.28■□□□□ 0.52
PCDH17-202ENST00000484979 DENND2AQ9ULE3 1009 aa18.28■□□□□ 0.52
PCDH17-202ENST00000484979 ADAMTS12P58397 1594 aa18.28■□□□□ 0.52
PCDH17-202ENST00000484979 NEMFO60524 1076 aa18.28■□□□□ 0.52
PCDH17-202ENST00000484979 BRPF3Q9ULD4 1205 aa18.28■□□□□ 0.52
PCDH17-202ENST00000484979 EYA2O00167 538 aa18.27■□□□□ 0.52
PCDH17-202ENST00000484979 USP8P40818 1118 aa18.27■□□□□ 0.52
PCDH17-202ENST00000484979 NECAB1Q8N987 351 aa18.27■□□□□ 0.52
PCDH17-202ENST00000484979 EDC4Q6P2E9 1401 aaKnown RBP18.27■□□□□ 0.52
PCDH17-202ENST00000484979 ZSCAN30Q86W11 494 aa18.27■□□□□ 0.52
PCDH17-202ENST00000484979 LMOD1P29536 600 aaPredicted RBP18.27■□□□□ 0.52
PCDH17-202ENST00000484979 GBP2P32456 591 aaPredicted RBP18.27■□□□□ 0.52
PCDH17-202ENST00000484979 KIF18AQ8NI77 898 aa18.27■□□□□ 0.52
PCDH17-202ENST00000484979 SPDYE3A6NKU9 549 aa18.27■□□□□ 0.51
PCDH17-202ENST00000484979 RIMBP2O15034 1052 aa18.27■□□□□ 0.51
PCDH17-202ENST00000484979 GSDMDP57764 484 aa18.27■□□□□ 0.51
PCDH17-202ENST00000484979 TRIM75PA6NK02 468 aa18.26■□□□□ 0.51
PCDH17-202ENST00000484979 CPLX3Q8WVH0 158 aa18.26■□□□□ 0.51
PCDH17-202ENST00000484979 CLIP2Q9UDT6 1046 aa18.26■□□□□ 0.51
PCDH17-202ENST00000484979 EIF4G3O43432 1585 aaKnown RBP18.26■□□□□ 0.51
PCDH17-202ENST00000484979 NMIQ13287 307 aaPredicted RBP18.26■□□□□ 0.51
PCDH17-202ENST00000484979 EXOC1Q9NV70 894 aa18.26■□□□□ 0.51
PCDH17-202ENST00000484979 EIF2AK4Q9P2K8 1649 aaKnown RBP18.26■□□□□ 0.51
PCDH17-202ENST00000484979 ZSCAN22P10073 491 aaPredicted RBP18.25■□□□□ 0.51
PCDH17-202ENST00000484979 TFCP2Q12800 502 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 VSIG10Q8N0Z9 540 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 MAGEB6Q8N7X4 407 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 METTL22Q9BUU2 404 aaPredicted RBP18.25■□□□□ 0.51
PCDH17-202ENST00000484979 WWC3Q9ULE0 1092 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 RAD50Q92878 1312 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 PLEKHG3A1L390 1219 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 GNA11P29992 359 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 PRIM1P49642 420 aaKnown RBP18.25■□□□□ 0.51
PCDH17-202ENST00000484979 SPAG1Q07617 926 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 LUZP1Q86V48 1076 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 TRIM47Q96LD4 638 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 SH2D4AQ9H788 454 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 CCDC172P0C7W6 258 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 Q6ZUG5 572 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 MIGA1Q8NAN2 632 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 RTL9Q8NET4 1388 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 MACROD2A1Z1Q3 448 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 BICD1Q96G01 975 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 CRACR2AQ9BSW2 395 aa18.25■□□□□ 0.51
PCDH17-202ENST00000484979 ZBTB40Q9NUA8 1239 aa18.24■□□□□ 0.51
PCDH17-202ENST00000484979 N4BP3O15049 544 aa18.24■□□□□ 0.51
PCDH17-202ENST00000484979 PDE8AO60658 829 aa18.24■□□□□ 0.51
PCDH17-202ENST00000484979 DRC1Q96MC2 740 aa18.24■□□□□ 0.51
PCDH17-202ENST00000484979 WDR62O43379 1518 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms