RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 SLC10A3P09131 477 aa20■□□□□ 0.79
HLA-DQB1-208ENST00000484729 RPS12P25398 132 aaKnown RBP19.99■□□□□ 0.79
HLA-DQB1-208ENST00000484729 KIF4BQ2VIQ3 1234 aa19.99■□□□□ 0.79
HLA-DQB1-208ENST00000484729 GGA3Q9NZ52 723 aa19.99■□□□□ 0.79
HLA-DQB1-208ENST00000484729 CTU1Q7Z7A3 348 aaKnown RBP19.98■□□□□ 0.79
HLA-DQB1-208ENST00000484729 SULF1Q8IWU6 871 aa19.98■□□□□ 0.79
HLA-DQB1-208ENST00000484729 CDCA5Q96FF9 252 aa19.98■□□□□ 0.79
HLA-DQB1-208ENST00000484729 FAM89AQ96GI7 184 aa19.98■□□□□ 0.79
HLA-DQB1-208ENST00000484729 LAS1LQ9Y4W2 734 aaKnown RBP19.98■□□□□ 0.79
HLA-DQB1-208ENST00000484729 AKAP11Q9UKA4 1901 aa19.98■□□□□ 0.79
HLA-DQB1-208ENST00000484729 DDX60Q8IY21 1712 aaKnown RBP19.97■□□□□ 0.79
HLA-DQB1-208ENST00000484729 KRT24Q2M2I5 525 aa19.97■□□□□ 0.79
HLA-DQB1-208ENST00000484729 RTL5Q5HYW3 569 aaPredicted RBP19.97■□□□□ 0.79
HLA-DQB1-208ENST00000484729 RUNDC1Q96C34 613 aa19.97■□□□□ 0.79
HLA-DQB1-208ENST00000484729 ATP5J2-PTCD1G3V325 749 aa19.95■□□□□ 0.78
HLA-DQB1-208ENST00000484729 SF3B3Q15393 1217 aaKnown RBP19.95■□□□□ 0.78
HLA-DQB1-208ENST00000484729 PRPF38BQ5VTL8 546 aaKnown RBP19.95■□□□□ 0.78
HLA-DQB1-208ENST00000484729 RASAL3Q86YV0 1011 aa19.95■□□□□ 0.78
HLA-DQB1-208ENST00000484729 TBC1D16Q8TBP0 767 aa19.95■□□□□ 0.78
HLA-DQB1-208ENST00000484729 EYA3Q99504 573 aa19.95■□□□□ 0.78
HLA-DQB1-208ENST00000484729 CHPF2Q9P2E5 772 aa19.95■□□□□ 0.78
HLA-DQB1-208ENST00000484729 HPS5Q9UPZ3 1129 aa19.95■□□□□ 0.78
HLA-DQB1-208ENST00000484729 CHL1O00533 1208 aa19.94■□□□□ 0.78
HLA-DQB1-208ENST00000484729 VIL1P09327 827 aaKnown RBP19.94■□□□□ 0.78
HLA-DQB1-208ENST00000484729 ANGEL2Q5VTE6 544 aaKnown RBP19.94■□□□□ 0.78
HLA-DQB1-208ENST00000484729 TRIM35Q9UPQ4 493 aa19.94■□□□□ 0.78
HLA-DQB1-208ENST00000484729 SCN9AQ15858 1988 aa19.94■□□□□ 0.78
HLA-DQB1-208ENST00000484729 SCARF1Q14162 830 aa19.93■□□□□ 0.78
HLA-DQB1-208ENST00000484729 ZC3H12CQ9C0D7 883 aaKnown RBP19.93■□□□□ 0.78
HLA-DQB1-208ENST00000484729 ADAMTS8Q9UP79 889 aa19.93■□□□□ 0.78
HLA-DQB1-208ENST00000484729 SCAF8Q9UPN6 1271 aaKnown RBP19.93■□□□□ 0.78
HLA-DQB1-208ENST00000484729 RPS8P62241 208 aaKnown RBP19.92■□□□□ 0.78
HLA-DQB1-208ENST00000484729 MOB2Q70IA6 237 aa19.92■□□□□ 0.78
HLA-DQB1-208ENST00000484729 PLBD2Q8NHP8 589 aa19.92■□□□□ 0.78
HLA-DQB1-208ENST00000484729 ISCA1Q9BUE6 129 aa19.92■□□□□ 0.78
HLA-DQB1-208ENST00000484729 G3V3G9 751 aa19.91■□□□□ 0.78
HLA-DQB1-208ENST00000484729 TBC1D8O95759 1140 aa19.91■□□□□ 0.78
HLA-DQB1-208ENST00000484729 DCAF8Q5TAQ9 597 aa19.91■□□□□ 0.78
HLA-DQB1-208ENST00000484729 HDGFL1Q5TGJ6 251 aa19.91■□□□□ 0.78
HLA-DQB1-208ENST00000484729 ANKRD13DQ6ZTN6 518 aa19.91■□□□□ 0.78
HLA-DQB1-208ENST00000484729 IRS4O14654 1257 aaPredicted RBP19.9■□□□□ 0.78
HLA-DQB1-208ENST00000484729 UFL1O94874 794 aa19.9■□□□□ 0.78
HLA-DQB1-208ENST00000484729 ZNF280AP59817 542 aaPredicted RBP19.9■□□□□ 0.78
HLA-DQB1-208ENST00000484729 SEC31BQ9NQW1 1179 aa19.9■□□□□ 0.78
HLA-DQB1-208ENST00000484729 HDAC9Q9UKV0 1011 aa19.9■□□□□ 0.78
HLA-DQB1-208ENST00000484729 REM2Q8IYK8 340 aaPredicted RBP19.89■□□□□ 0.77
HLA-DQB1-208ENST00000484729 ZNF296Q8WUU4 475 aaPredicted RBP19.89■□□□□ 0.77
HLA-DQB1-208ENST00000484729 PRKRIP1Q9H875 184 aaPredicted RBP19.89■□□□□ 0.77
HLA-DQB1-208ENST00000484729 UBE2Q2LH0YL09 131 aa19.88■□□□□ 0.77
HLA-DQB1-208ENST00000484729 PRAMEF18Q5VWM3 479 aa19.88■□□□□ 0.77
HLA-DQB1-208ENST00000484729 RSBN1LQ6PCB5 846 aaPredicted RBP19.88■□□□□ 0.77
HLA-DQB1-208ENST00000484729 ANKIB1Q9P2G1 1089 aa19.88■□□□□ 0.77
HLA-DQB1-208ENST00000484729 HOXB7P09629 217 aa19.87■□□□□ 0.77
HLA-DQB1-208ENST00000484729 PODXL2Q9NZ53 605 aa19.87■□□□□ 0.77
HLA-DQB1-208ENST00000484729 PAPPA2Q9BXP8 1791 aa19.86■□□□□ 0.77
HLA-DQB1-208ENST00000484729 FKBP1BP68106 108 aa19.86■□□□□ 0.77
HLA-DQB1-208ENST00000484729 PKN2Q16513 984 aaKnown RBP19.86■□□□□ 0.77
HLA-DQB1-208ENST00000484729 AGBL3Q8NEM8 1001 aa19.86■□□□□ 0.77
HLA-DQB1-208ENST00000484729 MYOZ2Q9NPC6 264 aa19.86■□□□□ 0.77
HLA-DQB1-208ENST00000484729 DBF4Q9UBU7 674 aaPredicted RBP19.86■□□□□ 0.77
HLA-DQB1-208ENST00000484729 GGA1Q9UJY5 639 aa19.86■□□□□ 0.77
HLA-DQB1-208ENST00000484729 MKRN3Q13064 507 aaKnown RBP19.85■□□□□ 0.77
HLA-DQB1-208ENST00000484729 DUSP27Q5VZP5 1158 aa19.85■□□□□ 0.77
HLA-DQB1-208ENST00000484729 GMLQ99445 158 aa19.85■□□□□ 0.77
HLA-DQB1-208ENST00000484729 MBIPQ9NS73 344 aa19.85■□□□□ 0.77
HLA-DQB1-208ENST00000484729 USP17L8P0C7I0 530 aa19.84■□□□□ 0.77
HLA-DQB1-208ENST00000484729 JARID2Q92833 1246 aaPredicted RBP19.84■□□□□ 0.77
HLA-DQB1-208ENST00000484729 CCDC85AQ96PX6 553 aaPredicted RBP19.84■□□□□ 0.77
HLA-DQB1-208ENST00000484729 GPR25O00155 361 aa19.83■□□□□ 0.77
HLA-DQB1-208ENST00000484729 APAF1O14727 1248 aa19.83■□□□□ 0.77
HLA-DQB1-208ENST00000484729 TRIM28Q13263 835 aaKnown RBP19.83■□□□□ 0.77
HLA-DQB1-208ENST00000484729 TTLL12Q14166 644 aaPredicted RBP19.83■□□□□ 0.77
HLA-DQB1-208ENST00000484729 PITPNM2Q9BZ72 1349 aa19.82■□□□□ 0.76
HLA-DQB1-208ENST00000484729 WTIPA6NIX2 430 aaPredicted RBP19.82■□□□□ 0.76
HLA-DQB1-208ENST00000484729 NBPF9Q3BBW0 867 aa19.82■□□□□ 0.76
HLA-DQB1-208ENST00000484729 ZBTB38Q8NAP3 1195 aaPredicted RBP19.82■□□□□ 0.76
HLA-DQB1-208ENST00000484729 HYPKQ9NX55 129 aa19.82■□□□□ 0.76
HLA-DQB1-208ENST00000484729 ZNF609O15014 1411 aa19.82■□□□□ 0.76
HLA-DQB1-208ENST00000484729 USP17L3A6NCW0 530 aa19.81■□□□□ 0.76
HLA-DQB1-208ENST00000484729 USP17L4A6NCW7 530 aa19.81■□□□□ 0.76
HLA-DQB1-208ENST00000484729 TM4SF4P48230 202 aa19.81■□□□□ 0.76
HLA-DQB1-208ENST00000484729 USP17L1Q7RTZ2 530 aa19.81■□□□□ 0.76
HLA-DQB1-208ENST00000484729 MXD3Q9BW11 206 aa19.81■□□□□ 0.76
HLA-DQB1-208ENST00000484729 R3HDMLQ9H3Y0 253 aa19.81■□□□□ 0.76
HLA-DQB1-208ENST00000484729 CALD1Q05682 793 aaKnown RBP19.8■□□□□ 0.76
HLA-DQB1-208ENST00000484729 FBXO46Q6PJ61 603 aaPredicted RBP19.8■□□□□ 0.76
HLA-DQB1-208ENST00000484729 RIC3Q7Z5B4 369 aa19.8■□□□□ 0.76
HLA-DQB1-208ENST00000484729 IFT57Q9NWB7 429 aa19.8■□□□□ 0.76
HLA-DQB1-208ENST00000484729 PSME4Q14997 1843 aa19.79■□□□□ 0.76
HLA-DQB1-208ENST00000484729 ZNF853P0CG23 659 aa19.79■□□□□ 0.76
HLA-DQB1-208ENST00000484729 GNAI1P63096 354 aa19.79■□□□□ 0.76
HLA-DQB1-208ENST00000484729 CCDC152Q4G0S7 254 aa19.79■□□□□ 0.76
HLA-DQB1-208ENST00000484729 XDHP47989 1333 aa19.78■□□□□ 0.76
HLA-DQB1-208ENST00000484729 ELL2O00472 640 aaPredicted RBP19.78■□□□□ 0.76
HLA-DQB1-208ENST00000484729 GOLGA2Q08379 1002 aa19.78■□□□□ 0.76
HLA-DQB1-208ENST00000484729 PRKG1Q13976 671 aa19.78■□□□□ 0.76
HLA-DQB1-208ENST00000484729 MYD88Q99836 296 aa19.78■□□□□ 0.76
HLA-DQB1-208ENST00000484729 PHAXQ9H814 394 aaKnown RBP19.78■□□□□ 0.76
HLA-DQB1-208ENST00000484729 PODNQ7Z5L7 613 aa19.77■□□□□ 0.76
HLA-DQB1-208ENST00000484729 ANKRD18AQ8IVF6 992 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms