RNA–Protein interactions for RNA: ENST00000484412.1

HDLBP-240, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-240ENST00000484412 C15orf52Q6ZUT6 534 aaKnown RBP17.52■□□□□ 0.4
HDLBP-240ENST00000484412 RIPOR2Q9Y4F9 1068 aa17.52■□□□□ 0.4
HDLBP-240ENST00000484412 KDM2BQ8NHM5 1336 aa17.51■□□□□ 0.39
HDLBP-240ENST00000484412 RFX5P48382 616 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-240ENST00000484412 CCDC85AQ96PX6 553 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-240ENST00000484412 ZNRF3Q9ULT6 936 aa17.51■□□□□ 0.39
HDLBP-240ENST00000484412 COL4A1P02462 1669 aa17.51■□□□□ 0.39
HDLBP-240ENST00000484412 LTBP1Q14766 1721 aa17.5■□□□□ 0.39
HDLBP-240ENST00000484412 LDHAL6AQ6ZMR3 332 aa17.5■□□□□ 0.39
HDLBP-240ENST00000484412 LARGE2Q8N3Y3 721 aa17.5■□□□□ 0.39
HDLBP-240ENST00000484412 TMEM57Q8N5G2 664 aa17.5■□□□□ 0.39
HDLBP-240ENST00000484412 GGA1Q9UJY5 639 aa17.5■□□□□ 0.39
HDLBP-240ENST00000484412 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.49■□□□□ 0.39
HDLBP-240ENST00000484412 L3MBTL3Q96JM7 780 aaPredicted RBP17.49■□□□□ 0.39
HDLBP-240ENST00000484412 MEIS3Q99687 375 aa17.49■□□□□ 0.39
HDLBP-240ENST00000484412 ZC3H12CQ9C0D7 883 aaKnown RBP17.49■□□□□ 0.39
HDLBP-240ENST00000484412 TNNQ9UQP3 1299 aa17.49■□□□□ 0.39
HDLBP-240ENST00000484412 POTECB2RU33 542 aa17.48■□□□□ 0.39
HDLBP-240ENST00000484412 ZBTB22O15209 634 aa17.48■□□□□ 0.39
HDLBP-240ENST00000484412 PPIP5K2O43314 1243 aa17.48■□□□□ 0.39
HDLBP-240ENST00000484412 PTPN12Q05209 780 aaKnown RBP17.48■□□□□ 0.39
HDLBP-240ENST00000484412 PODNQ7Z5L7 613 aa17.48■□□□□ 0.39
HDLBP-240ENST00000484412 GPC2Q8N158 579 aa17.48■□□□□ 0.39
HDLBP-240ENST00000484412 CLUAP1Q96AJ1 413 aa17.48■□□□□ 0.39
HDLBP-240ENST00000484412 CHMP4BQ9H444 224 aaKnown RBP17.48■□□□□ 0.39
HDLBP-240ENST00000484412 GPBP1L1Q9HC44 474 aaPredicted RBP17.48■□□□□ 0.39
HDLBP-240ENST00000484412 COPRSQ9NQ92 184 aa17.48■□□□□ 0.39
HDLBP-240ENST00000484412 ANKIB1Q9P2G1 1089 aa17.48■□□□□ 0.39
HDLBP-240ENST00000484412 DUOX1Q9NRD9 1551 aa17.48■□□□□ 0.39
HDLBP-240ENST00000484412 GNAI2P04899 355 aa17.47■□□□□ 0.39
HDLBP-240ENST00000484412 RLBP1P12271 317 aa17.47■□□□□ 0.39
HDLBP-240ENST00000484412 CHRNDQ07001 517 aa17.47■□□□□ 0.39
HDLBP-240ENST00000484412 UBE4AQ14139 1066 aa17.47■□□□□ 0.39
HDLBP-240ENST00000484412 SLC51AQ86UW1 340 aa17.47■□□□□ 0.39
HDLBP-240ENST00000484412 MROH5Q6ZUA9 1318 aa17.47■□□□□ 0.39
HDLBP-240ENST00000484412 C6orf229H3BNL8 230 aa17.46■□□□□ 0.39
HDLBP-240ENST00000484412 CIAO1O76071 339 aa17.46■□□□□ 0.39
HDLBP-240ENST00000484412 VEGFAP15692 232 aaPredicted RBP17.46■□□□□ 0.39
HDLBP-240ENST00000484412 EIF6P56537 245 aaKnown RBP17.46■□□□□ 0.39
HDLBP-240ENST00000484412 AOC3Q16853 763 aa17.46■□□□□ 0.39
HDLBP-240ENST00000484412 FTSJ3Q8IY81 847 aaKnown RBP17.46■□□□□ 0.39
HDLBP-240ENST00000484412 NIM1KQ8IY84 436 aa17.46■□□□□ 0.39
HDLBP-240ENST00000484412 ZNF804BA4D1E1 1349 aa17.46■□□□□ 0.38
HDLBP-240ENST00000484412 IRS2Q9Y4H2 1338 aa17.46■□□□□ 0.38
HDLBP-240ENST00000484412 MED23Q9ULK4 1368 aa17.45■□□□□ 0.38
HDLBP-240ENST00000484412 KIF3CO14782 793 aa17.45■□□□□ 0.38
HDLBP-240ENST00000484412 ATP8B2P98198 1209 aa17.45■□□□□ 0.38
HDLBP-240ENST00000484412 CXCL9Q07325 125 aa17.45■□□□□ 0.38
HDLBP-240ENST00000484412 ZNF594Q96JF6 807 aaPredicted RBP17.45■□□□□ 0.38
HDLBP-240ENST00000484412 CHMP3Q9Y3E7 222 aa17.45■□□□□ 0.38
HDLBP-240ENST00000484412 LRRFIP2Q9Y608 721 aaKnown RBP17.45■□□□□ 0.38
HDLBP-240ENST00000484412 EYA2O00167 538 aa17.44■□□□□ 0.38
HDLBP-240ENST00000484412 DDNO94850 711 aaPredicted RBP17.44■□□□□ 0.38
HDLBP-240ENST00000484412 UFL1O94874 794 aa17.44■□□□□ 0.38
HDLBP-240ENST00000484412 MMP14P50281 582 aa17.44■□□□□ 0.38
HDLBP-240ENST00000484412 TNIP1Q15025 636 aa17.44■□□□□ 0.38
HDLBP-240ENST00000484412 VGLL2Q8N8G2 317 aa17.44■□□□□ 0.38
HDLBP-240ENST00000484412 COA1Q9GZY4 146 aa17.44■□□□□ 0.38
HDLBP-240ENST00000484412 CNNM1Q9NRU3 951 aa17.44■□□□□ 0.38
HDLBP-240ENST00000484412 DDX19BQ9UMR2 479 aa17.44■□□□□ 0.38
HDLBP-240ENST00000484412 WDR90Q96KV7 1748 aa17.44■□□□□ 0.38
HDLBP-240ENST00000484412 COL4A5P29400 1685 aa17.43■□□□□ 0.38
HDLBP-240ENST00000484412 PDE8BO95263 885 aa17.43■□□□□ 0.38
HDLBP-240ENST00000484412 MVPQ14764 893 aaKnown RBP17.43■□□□□ 0.38
HDLBP-240ENST00000484412 TAF7LQ5H9L4 462 aa17.43■□□□□ 0.38
HDLBP-240ENST00000484412 DPF2Q92785 391 aa17.43■□□□□ 0.38
HDLBP-240ENST00000484412 PUS3Q9BZE2 481 aaKnown RBP17.43■□□□□ 0.38
HDLBP-240ENST00000484412 YDJCA8MPS7 323 aa17.42■□□□□ 0.38
HDLBP-240ENST00000484412 VIL1P09327 827 aaKnown RBP17.42■□□□□ 0.38
HDLBP-240ENST00000484412 POLA2Q14181 598 aa17.42■□□□□ 0.38
HDLBP-240ENST00000484412 CIAPIN1Q6FI81 312 aa17.42■□□□□ 0.38
HDLBP-240ENST00000484412 ATG9AQ7Z3C6 839 aa17.42■□□□□ 0.38
HDLBP-240ENST00000484412 SSH3Q8TE77 659 aa17.42■□□□□ 0.38
HDLBP-240ENST00000484412 RRAGCQ9HB90 399 aa17.42■□□□□ 0.38
HDLBP-240ENST00000484412 ZBTB40Q9NUA8 1239 aa17.42■□□□□ 0.38
HDLBP-240ENST00000484412 ZNF609O15014 1411 aa17.41■□□□□ 0.38
HDLBP-240ENST00000484412 IQCA1LA6NCM1 817 aa17.41■□□□□ 0.38
HDLBP-240ENST00000484412 TOMM70O94826 608 aa17.41■□□□□ 0.38
HDLBP-240ENST00000484412 IL15P40933 162 aaPredicted RBP17.41■□□□□ 0.38
HDLBP-240ENST00000484412 LRRC24Q50LG9 513 aa17.41■□□□□ 0.38
HDLBP-240ENST00000484412 WTIPA6NIX2 430 aaPredicted RBP17.4■□□□□ 0.38
HDLBP-240ENST00000484412 RIMBP2O15034 1052 aa17.4■□□□□ 0.38
HDLBP-240ENST00000484412 IL1R1P14778 569 aa17.4■□□□□ 0.38
HDLBP-240ENST00000484412 FGFR2P21802 821 aa17.4■□□□□ 0.38
HDLBP-240ENST00000484412 ITPRIPQ8IWB1 547 aa17.4■□□□□ 0.38
HDLBP-240ENST00000484412 RPAP2Q8IXW5 612 aaPredicted RBP17.4■□□□□ 0.38
HDLBP-240ENST00000484412 PANK1Q8TE04 598 aa17.4■□□□□ 0.38
HDLBP-240ENST00000484412 NMRK2Q9NPI5 230 aa17.4■□□□□ 0.38
HDLBP-240ENST00000484412 NOP58Q9Y2X3 529 aaKnown RBP17.4■□□□□ 0.38
HDLBP-240ENST00000484412 TIAM2Q8IVF5 1701 aa17.4■□□□□ 0.38
HDLBP-240ENST00000484412 ZNF541Q9H0D2 1346 aa17.4■□□□□ 0.38
HDLBP-240ENST00000484412 SCN4AP35499 1836 aa17.4■□□□□ 0.38
HDLBP-240ENST00000484412 SRGAP3O43295 1099 aa17.39■□□□□ 0.37
HDLBP-240ENST00000484412 ECE2O60344 883 aa17.39■□□□□ 0.37
HDLBP-240ENST00000484412 TAF5LO75529 589 aa17.39■□□□□ 0.37
HDLBP-240ENST00000484412 RPS12P25398 132 aaKnown RBP17.39■□□□□ 0.37
HDLBP-240ENST00000484412 TXNRD3Q86VQ6 643 aa17.39■□□□□ 0.37
HDLBP-240ENST00000484412 FKBP1AP62942 108 aaKnown RBP17.38■□□□□ 0.37
HDLBP-240ENST00000484412 STRIP1Q5VSL9 837 aa17.38■□□□□ 0.37
HDLBP-240ENST00000484412 FBXO33Q7Z6M2 555 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms