RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 H2AFB1P0C5Y9 115 aa9.43□□□□□ -0.9
SCAF11-207ENST00000484275 H2AFB2P0C5Z0 115 aa9.43□□□□□ -0.9
SCAF11-207ENST00000484275 NOS3P29474 1203 aa9.43□□□□□ -0.9
SCAF11-207ENST00000484275 ZAP70P43403 619 aa9.43□□□□□ -0.9
SCAF11-207ENST00000484275 IREB2P48200 963 aaKnown RBP9.43□□□□□ -0.9
SCAF11-207ENST00000484275 TP53INP1Q96A56 240 aa9.43□□□□□ -0.9
SCAF11-207ENST00000484275 SEPT3Q9UH03 358 aa9.43□□□□□ -0.9
SCAF11-207ENST00000484275 TRIM33Q9UPN9 1127 aa9.43□□□□□ -0.9
SCAF11-207ENST00000484275 GHRHP01286 108 aa9.42□□□□□ -0.9
SCAF11-207ENST00000484275 IGF2-ASQ6U949 168 aa9.42□□□□□ -0.9
SCAF11-207ENST00000484275 OR13H1Q8NG92 308 aa9.42□□□□□ -0.9
SCAF11-207ENST00000484275 GPR152Q8TDT2 470 aa9.42□□□□□ -0.9
SCAF11-207ENST00000484275 PIK3R5Q8WYR1 880 aa9.42□□□□□ -0.9
SCAF11-207ENST00000484275 CCDC97Q96F63 343 aaPredicted RBP9.42□□□□□ -0.9
SCAF11-207ENST00000484275 STIM2Q9P246 746 aa9.42□□□□□ -0.9
SCAF11-207ENST00000484275 IL22RA1Q8N6P7 574 aa9.41□□□□□ -0.9
SCAF11-207ENST00000484275 ATP2B4P23634 1241 aa9.4□□□□□ -0.9
SCAF11-207ENST00000484275 SCNN1AP37088 669 aa9.4□□□□□ -0.9
SCAF11-207ENST00000484275 ADAMTSL4Q6UY14 1074 aa9.4□□□□□ -0.9
SCAF11-207ENST00000484275 MEGF10Q96KG7 1140 aa9.4□□□□□ -0.9
SCAF11-207ENST00000484275 SERPINA10Q9UK55 444 aa9.4□□□□□ -0.9
SCAF11-207ENST00000484275 ATP11AP98196 1134 aa9.39□□□□□ -0.91
SCAF11-207ENST00000484275 SETDB1Q15047 1291 aa9.39□□□□□ -0.91
SCAF11-207ENST00000484275 CYP2E1P05181 493 aaPredicted RBP9.38□□□□□ -0.91
SCAF11-207ENST00000484275 ATCAYQ86WG3 371 aa9.38□□□□□ -0.91
SCAF11-207ENST00000484275 FAM13BQ9NYF5 915 aa9.38□□□□□ -0.91
SCAF11-207ENST00000484275 ALX3O95076 343 aa9.37□□□□□ -0.91
SCAF11-207ENST00000484275 RBSNQ9H1K0 784 aa9.37□□□□□ -0.91
SCAF11-207ENST00000484275 ABTB2Q8N961 1025 aa9.36□□□□□ -0.91
SCAF11-207ENST00000484275 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.36□□□□□ -0.91
SCAF11-207ENST00000484275 KIF4AO95239 1232 aa9.35□□□□□ -0.91
SCAF11-207ENST00000484275 HYAL2Q12891 473 aa9.35□□□□□ -0.91
SCAF11-207ENST00000484275 NUDT16Q96DE0 195 aaKnown RBP9.35□□□□□ -0.91
SCAF11-207ENST00000484275 RASSF4Q9H2L5 321 aa9.35□□□□□ -0.91
SCAF11-207ENST00000484275 ABI2Q9NYB9 513 aaPredicted RBP9.35□□□□□ -0.91
SCAF11-207ENST00000484275 TMEM63CQ9P1W3 806 aa9.35□□□□□ -0.91
SCAF11-207ENST00000484275 FNDC3AQ9Y2H6 1198 aaKnown RBP9.35□□□□□ -0.91
SCAF11-207ENST00000484275 SCO2A0A1W2PP80 73 aa9.34□□□□□ -0.91
SCAF11-207ENST00000484275 F8W735 103 aaPredicted RBP9.34□□□□□ -0.91
SCAF11-207ENST00000484275 TM4SF5O14894 197 aa9.34□□□□□ -0.91
SCAF11-207ENST00000484275 TTC39BQ5VTQ0 682 aaPredicted RBP9.34□□□□□ -0.91
SCAF11-207ENST00000484275 DZIP1LQ8IYY4 767 aaKnown RBP9.34□□□□□ -0.91
SCAF11-207ENST00000484275 TMEM130Q8N3G9 435 aa9.34□□□□□ -0.91
SCAF11-207ENST00000484275 GALNT11Q8NCW6 608 aa9.34□□□□□ -0.91
SCAF11-207ENST00000484275 AKTIPQ9H8T0 292 aa9.34□□□□□ -0.91
SCAF11-207ENST00000484275 TMEM88BA6NKF7 163 aa9.33□□□□□ -0.92
SCAF11-207ENST00000484275 ARTNQ5T4W7 220 aa9.33□□□□□ -0.92
SCAF11-207ENST00000484275 CEP135Q66GS9 1140 aa9.33□□□□□ -0.92
SCAF11-207ENST00000484275 LACRTQ9GZZ8 138 aa9.33□□□□□ -0.92
SCAF11-207ENST00000484275 MRPL18Q9H0U6 180 aaKnown RBP9.33□□□□□ -0.92
SCAF11-207ENST00000484275 CNTN3Q9P232 1028 aa9.33□□□□□ -0.92
SCAF11-207ENST00000484275 PPME1Q9Y570 386 aa9.33□□□□□ -0.92
SCAF11-207ENST00000484275 LINC01387J3KSC0 135 aa9.32□□□□□ -0.92
SCAF11-207ENST00000484275 TXNDC11Q6PKC3 985 aa9.32□□□□□ -0.92
SCAF11-207ENST00000484275 AGGF1Q8N302 714 aaeCLIP9.32□□□□□ -0.92
SCAF11-207ENST00000484275 CCDC82Q8N4S0 544 aa9.32□□□□□ -0.92
SCAF11-207ENST00000484275 CEP120Q8N960 986 aa9.32□□□□□ -0.92
SCAF11-207ENST00000484275 HELQQ8TDG4 1101 aa9.32□□□□□ -0.92
SCAF11-207ENST00000484275 ELP3Q9H9T3 547 aa9.32□□□□□ -0.92
SCAF11-207ENST00000484275 SRA1Q9HD15 236 aaKnown RBP9.32□□□□□ -0.92
SCAF11-207ENST00000484275 GTF3C3Q9Y5Q9 886 aa9.32□□□□□ -0.92
SCAF11-207ENST00000484275 PRR23CQ6ZRP0 262 aa9.31□□□□□ -0.92
SCAF11-207ENST00000484275 MAP4K3Q8IVH8 894 aa9.31□□□□□ -0.92
SCAF11-207ENST00000484275 C1orf115Q9H7X2 142 aa9.31□□□□□ -0.92
SCAF11-207ENST00000484275 KCNK4Q9NYG8 393 aa9.31□□□□□ -0.92
SCAF11-207ENST00000484275 A6NHS1 94 aa9.3□□□□□ -0.92
SCAF11-207ENST00000484275 WISP1O95388 367 aa9.3□□□□□ -0.92
SCAF11-207ENST00000484275 PDE12Q6L8Q7 609 aaKnown RBP9.3□□□□□ -0.92
SCAF11-207ENST00000484275 Q6ZS46 218 aa9.3□□□□□ -0.92
SCAF11-207ENST00000484275 CACTIN-AS1Q8N1I8 211 aa9.3□□□□□ -0.92
SCAF11-207ENST00000484275 EDEM1Q92611 657 aa9.3□□□□□ -0.92
SCAF11-207ENST00000484275 SPACA7Q96KW9 195 aa9.3□□□□□ -0.92
SCAF11-207ENST00000484275 PBX4Q9BYU1 374 aa9.3□□□□□ -0.92
SCAF11-207ENST00000484275 GGNBP2Q9H3C7 697 aa9.3□□□□□ -0.92
SCAF11-207ENST00000484275 ZFP64Q9NPA5 681 aa9.3□□□□□ -0.92
SCAF11-207ENST00000484275 KANSL3Q9P2N6 904 aa9.3□□□□□ -0.92
SCAF11-207ENST00000484275 SMNDC1O75940 238 aaKnown RBP eCLIP9.29□□□□□ -0.92
SCAF11-207ENST00000484275 ACPPP15309 386 aa9.29□□□□□ -0.92
SCAF11-207ENST00000484275 CDC25BP30305 580 aa9.29□□□□□ -0.92
SCAF11-207ENST00000484275 POP1Q99575 1024 aaKnown RBP9.29□□□□□ -0.92
SCAF11-207ENST00000484275 MUC3BQ9H195 1237 aa9.29□□□□□ -0.92
SCAF11-207ENST00000484275 SH2B1Q9NRF2 756 aaPredicted RBP9.29□□□□□ -0.92
SCAF11-207ENST00000484275 EPHA1P21709 976 aa9.28□□□□□ -0.92
SCAF11-207ENST00000484275 MPSTP25325 297 aa9.28□□□□□ -0.92
SCAF11-207ENST00000484275 SSFA2P28290 1259 aa9.28□□□□□ -0.92
SCAF11-207ENST00000484275 CDC27P30260 824 aa9.28□□□□□ -0.92
SCAF11-207ENST00000484275 DNM1Q05193 864 aaKnown RBP9.28□□□□□ -0.92
SCAF11-207ENST00000484275 MTMR3Q13615 1198 aa9.28□□□□□ -0.92
SCAF11-207ENST00000484275 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.28□□□□□ -0.92
SCAF11-207ENST00000484275 ZNF438Q7Z4V0 828 aa9.28□□□□□ -0.92
SCAF11-207ENST00000484275 NCAPG2Q86XI2 1143 aa9.28□□□□□ -0.92
SCAF11-207ENST00000484275 C1orf127Q8N9H9 656 aa9.28□□□□□ -0.92
SCAF11-207ENST00000484275 GTF3C2Q8WUA4 911 aaPredicted RBP9.28□□□□□ -0.92
SCAF11-207ENST00000484275 CARD10Q9BWT7 1032 aa9.28□□□□□ -0.92
SCAF11-207ENST00000484275 KRTAP4-8Q9BYQ9 185 aa9.28□□□□□ -0.92
SCAF11-207ENST00000484275 CARNS1A5YM72 827 aa9.27□□□□□ -0.93
SCAF11-207ENST00000484275 PDGFAP04085 211 aa9.27□□□□□ -0.93
SCAF11-207ENST00000484275 EIF1AXP47813 144 aaKnown RBP9.27□□□□□ -0.93
SCAF11-207ENST00000484275 XKR5Q6UX68 686 aa9.27□□□□□ -0.93
SCAF11-207ENST00000484275 SALL4Q9UJQ4 1053 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms