RNA–Protein interactions for RNA: ENST00000484254.1

CNTNAP3B-208, Transcript of contactin associated protein like 3B, human

TSL 3

Gene CNTNAP3B, Length 742 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNTNAP3B-208	ENST00000484254	ARHGAP45	Q92619	1136 aa		27.95	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	SUCLG2	Q96I99	432 aa		27.95	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	GGA1	Q9UJY5	639 aa		27.95	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	MINPP1	Q9UNW1	487 aa		27.95	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	XDH	P47989	1333 aa		27.94	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	UFL1	O94874	794 aa		27.94	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	CCT4	P50991	539 aa	Known RBP	27.94	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	IFIT5	Q13325	482 aa	Known RBP	27.94	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	KAZALD1	Q96I82	304 aa		27.94	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	CHMP3	Q9Y3E7	222 aa		27.94	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	IQCA1L	A6NCM1	817 aa		27.93	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	MPHOSPH8	Q99549	860 aa		27.93	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	USP44	Q9H0E7	712 aa		27.93	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	RIMBP2	O15034	1052 aa		27.92	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	GPR101	Q96P66	508 aa	Predicted RBP	27.92	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	GJA3	Q9Y6H8	435 aa		27.92	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	SCN4A	P35499	1836 aa		27.92	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	BCAR3	O75815	825 aa		27.91	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	ATP2B4	P23634	1241 aa		27.91	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	CXCL9	Q07325	125 aa		27.91	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	ZC3H12C	Q9C0D7	883 aa	Known RBP	27.91	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	IPO8	O15397	1037 aa	Known RBP	27.9	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	CCDC57	Q2TAC2	916 aa		27.9	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	YDJC	A8MPS7	323 aa		27.89	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	HACL1	Q9UJ83	578 aa		27.89	■■■□□ 2.06
CNTNAP3B-208	ENST00000484254	FSTL1	Q12841	308 aa		27.88	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	RABL6	Q3YEC7	729 aa	Predicted RBP	27.88	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	ANKRD2	Q9GZV1	360 aa		27.88	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	TAF1D	Q9H5J8	278 aa	Predicted RBP	27.88	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	BICC1	Q9H694	974 aa	Known RBP	27.88	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	TNIP1	Q15025	636 aa		27.87	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	CIAPIN1	Q6FI81	312 aa		27.87	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	ANKRD44	Q8N8A2	993 aa		27.87	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	SMC1B	Q8NDV3	1235 aa		27.87	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	DBNDD1	Q9H9R9	158 aa		27.87	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	RAD17	O75943	681 aa		27.86	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	DOK7	Q18PE1	504 aa		27.86	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	FRAT1	Q92837	279 aa	Predicted RBP	27.86	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	LEMD3	Q9Y2U8	911 aa		27.86	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	WTIP	A6NIX2	430 aa	Predicted RBP	27.85	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	ECE2	O60344	883 aa		27.85	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	CHRND	Q07001	517 aa		27.85	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	TAF7L	Q5H9L4	462 aa		27.85	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	INTS3	Q68E01	1043 aa	Known RBP	27.85	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	ZNF594	Q96JF6	807 aa	Predicted RBP	27.85	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	TRIM27	P14373	513 aa		27.84	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	EPHX2	P34913	555 aa		27.84	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	SCNN1D	P51172	638 aa		27.84	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	ATF7IP	Q6VMQ6	1270 aa		27.84	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254		G3V3G9	751 aa		27.83	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	HSPA6	P17066	643 aa		27.83	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	LMOD1	P29536	600 aa	Predicted RBP	27.83	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	DCAF8	Q5TAQ9	597 aa		27.83	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	LDHAL6A	Q6ZMR3	332 aa		27.83	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	MED23	Q9ULK4	1368 aa		27.83	■■■□□ 2.05
CNTNAP3B-208	ENST00000484254	UBTFL1	P0CB47	393 aa	Predicted RBP	27.81	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	GMPS	P49915	693 aa	Predicted RBP	27.81	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	ZKSCAN2	Q63HK3	967 aa		27.81	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	PNMA8A	Q86V59	439 aa	Predicted RBP	27.81	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	ZNF804B	A4D1E1	1349 aa		27.81	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	POTEI	P0CG38	1075 aa		27.8	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	POTEJ	P0CG39	1038 aa		27.8	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	EPS15	P42566	896 aa		27.8	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	KCNQ5	Q9NR82	932 aa		27.8	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	CNNM1	Q9NRU3	951 aa		27.8	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	GPRC5D	Q9NZD1	345 aa		27.8	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	TNN	Q9UQP3	1299 aa		27.8	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	PSMD14	O00487	310 aa		27.79	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	EAPP	Q56P03	285 aa	Predicted RBP	27.79	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	CHADL	Q6NUI6	762 aa		27.79	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	LDHD	Q86WU2	507 aa		27.79	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	HDAC5	Q9UQL6	1122 aa		27.79	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	KCNJ4	P48050	445 aa		27.78	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	HELB	Q8NG08	1087 aa	Predicted RBP	27.78	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254		A0A1B0GUL6	1792 aa		27.78	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	TAF5L	O75529	589 aa		27.77	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	PODN	Q7Z5L7	613 aa		27.77	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	CLUAP1	Q96AJ1	413 aa		27.77	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	MEIS3	Q99687	375 aa		27.77	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	SCN9A	Q15858	1988 aa		27.77	■■■□□ 2.04
CNTNAP3B-208	ENST00000484254	ADAMTSL1	Q8N6G6	1762 aa		27.76	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	TXNRD3	Q86VQ6	643 aa		27.76	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	PUS3	Q9BZE2	481 aa	Known RBP	27.76	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	VIL1	P09327	827 aa	Known RBP	27.75	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	DPF2	Q92785	391 aa		27.75	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	COA1	Q9GZY4	146 aa		27.75	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	ZBTB12	Q9Y330	459 aa	Predicted RBP	27.75	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	RIPOR2	Q9Y4F9	1068 aa		27.75	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	GNAI3	P08754	354 aa		27.74	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	RPS12	P25398	132 aa	Known RBP	27.74	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	KLRK1	P26718	216 aa		27.74	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	C15orf52	Q6ZUT6	534 aa	Known RBP	27.74	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	USP50	Q70EL3	339 aa	Predicted RBP	27.74	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	ADARB2	Q9NS39	739 aa	Known RBP	27.74	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	CLEC11A	Q9Y240	323 aa		27.74	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	LRRFIP2	Q9Y608	721 aa	Known RBP	27.74	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	IRS2	Q9Y4H2	1338 aa		27.73	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	SNAP23	O00161	211 aa		27.73	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	PLIN1	O60240	522 aa		27.73	■■■□□ 2.03
CNTNAP3B-208	ENST00000484254	APLP1	P51693	650 aa		27.73	■■■□□ 2.03

Retrieved 100 of 20,778 RNA–protein pairs in 178.7 ms