RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 EYA3Q99504 573 aa24.62■■□□□ 1.53
NDUFA3-213ENST00000484103 EXOSC9Q06265 439 aaKnown RBP24.61■■□□□ 1.53
NDUFA3-213ENST00000484103 FKBP5Q13451 457 aaPredicted RBP24.61■■□□□ 1.53
NDUFA3-213ENST00000484103 MICALL2Q8IY33 904 aa24.61■■□□□ 1.53
NDUFA3-213ENST00000484103 CTSWP56202 376 aa24.6■■□□□ 1.53
NDUFA3-213ENST00000484103 FLIIQ13045 1269 aa24.6■■□□□ 1.53
NDUFA3-213ENST00000484103 UBE3BQ7Z3V4 1068 aa24.6■■□□□ 1.53
NDUFA3-213ENST00000484103 ANKRD18AQ8IVF6 992 aa24.6■■□□□ 1.53
NDUFA3-213ENST00000484103 ZNF408Q9H9D4 720 aa24.6■■□□□ 1.53
NDUFA3-213ENST00000484103 CNOT7Q9UIV1 285 aaKnown RBP24.6■■□□□ 1.53
NDUFA3-213ENST00000484103 NEURL1BA8MQ27 555 aa24.59■■□□□ 1.53
NDUFA3-213ENST00000484103 DEFB115Q30KQ5 88 aa24.59■■□□□ 1.53
NDUFA3-213ENST00000484103 RBM26Q5T8P6 1007 aaKnown RBP24.59■■□□□ 1.53
NDUFA3-213ENST00000484103 GLIS2Q9BZE0 524 aaPredicted RBP24.59■■□□□ 1.53
NDUFA3-213ENST00000484103 ZC3H12CQ9C0D7 883 aaKnown RBP24.59■■□□□ 1.53
NDUFA3-213ENST00000484103 SPINK5Q9NQ38 1064 aaPredicted RBP24.59■■□□□ 1.53
NDUFA3-213ENST00000484103 GGA1Q9UJY5 639 aa24.59■■□□□ 1.53
NDUFA3-213ENST00000484103 SPEF2Q9C093 1822 aa24.58■■□□□ 1.53
NDUFA3-213ENST00000484103 CAPN15O75808 1086 aa24.58■■□□□ 1.53
NDUFA3-213ENST00000484103 HIRAP54198 1017 aaPredicted RBP24.58■■□□□ 1.53
NDUFA3-213ENST00000484103 GREM2Q9H772 168 aa24.58■■□□□ 1.53
NDUFA3-213ENST00000484103 H7C1D1 291 aa24.57■■□□□ 1.52
NDUFA3-213ENST00000484103 TBC1D10BQ4KMP7 808 aaPredicted RBP24.57■■□□□ 1.52
NDUFA3-213ENST00000484103 SAMD7Q7Z3H4 446 aa24.57■■□□□ 1.52
NDUFA3-213ENST00000484103 CDHR2Q9BYE9 1310 aa24.57■■□□□ 1.52
NDUFA3-213ENST00000484103 RTL9Q8NET4 1388 aa24.56■■□□□ 1.52
NDUFA3-213ENST00000484103 WDR63Q8IWG1 891 aa24.56■■□□□ 1.52
NDUFA3-213ENST00000484103 TNS4Q8IZW8 715 aa24.56■■□□□ 1.52
NDUFA3-213ENST00000484103 WTIPA6NIX2 430 aaPredicted RBP24.55■■□□□ 1.52
NDUFA3-213ENST00000484103 VAMP4O75379 141 aa24.55■■□□□ 1.52
NDUFA3-213ENST00000484103 CST9Q5W186 159 aa24.55■■□□□ 1.52
NDUFA3-213ENST00000484103 DLK2Q6UY11 383 aa24.55■■□□□ 1.52
NDUFA3-213ENST00000484103 TTLL11Q8NHH1 800 aa24.55■■□□□ 1.52
NDUFA3-213ENST00000484103 FOXN1O15353 648 aa24.54■■□□□ 1.52
NDUFA3-213ENST00000484103 CELF2O95319 508 aaKnown RBP24.54■■□□□ 1.52
NDUFA3-213ENST00000484103 EGFRP00533 1210 aa24.54■■□□□ 1.52
NDUFA3-213ENST00000484103 DNAAF4Q8WXU2 420 aa24.54■■□□□ 1.52
NDUFA3-213ENST00000484103 CDC5LQ99459 802 aaKnown RBP24.54■■□□□ 1.52
NDUFA3-213ENST00000484103 RASSF10A6NK89 507 aa24.53■■□□□ 1.52
NDUFA3-213ENST00000484103 F6X3S4 739 aa24.53■■□□□ 1.52
NDUFA3-213ENST00000484103 CYP4F22Q6NT55 531 aa24.53■■□□□ 1.52
NDUFA3-213ENST00000484103 AIDAQ96BJ3 306 aa24.53■■□□□ 1.52
NDUFA3-213ENST00000484103 PODXL2Q9NZ53 605 aa24.53■■□□□ 1.52
NDUFA3-213ENST00000484103 WDR33Q9C0J8 1336 aaKnown RBP24.53■■□□□ 1.52
NDUFA3-213ENST00000484103 GCKRQ14397 625 aa24.52■■□□□ 1.52
NDUFA3-213ENST00000484103 XDHP47989 1333 aa24.52■■□□□ 1.52
NDUFA3-213ENST00000484103 H7C1W4 665 aa24.51■■□□□ 1.51
NDUFA3-213ENST00000484103 USP48Q86UV5 1035 aa24.51■■□□□ 1.51
NDUFA3-213ENST00000484103 FBXW7Q969H0 707 aa24.51■■□□□ 1.51
NDUFA3-213ENST00000484103 MYH3P11055 1940 aa24.51■■□□□ 1.51
NDUFA3-213ENST00000484103 TRPM7Q96QT4 1865 aa24.5■■□□□ 1.51
NDUFA3-213ENST00000484103 FAM161AQ3B820 660 aa24.5■■□□□ 1.51
NDUFA3-213ENST00000484103 MYH16Q9H6N6 1097 aa24.5■■□□□ 1.51
NDUFA3-213ENST00000484103 SCN9AQ15858 1988 aa24.5■■□□□ 1.51
NDUFA3-213ENST00000484103 ATP2B4P23634 1241 aa24.49■■□□□ 1.51
NDUFA3-213ENST00000484103 NCBP3Q53F19 620 aaKnown RBP24.49■■□□□ 1.51
NDUFA3-213ENST00000484103 DPF2Q92785 391 aa24.49■■□□□ 1.51
NDUFA3-213ENST00000484103 CAPNS2Q96L46 248 aa24.49■■□□□ 1.51
NDUFA3-213ENST00000484103 MINPP1Q9UNW1 487 aa24.49■■□□□ 1.51
NDUFA3-213ENST00000484103 CHMP3Q9Y3E7 222 aa24.49■■□□□ 1.51
NDUFA3-213ENST00000484103 ITGA6P23229 1130 aa24.48■■□□□ 1.51
NDUFA3-213ENST00000484103 IGHMBP2P38935 993 aaKnown RBP24.48■■□□□ 1.51
NDUFA3-213ENST00000484103 LINS1Q8NG48 757 aa24.48■■□□□ 1.51
NDUFA3-213ENST00000484103 RPS12P25398 132 aaKnown RBP24.47■■□□□ 1.51
NDUFA3-213ENST00000484103 KIF4BQ2VIQ3 1234 aa24.47■■□□□ 1.51
NDUFA3-213ENST00000484103 CDC37L1Q7L3B6 337 aa24.47■■□□□ 1.51
NDUFA3-213ENST00000484103 BSDC1Q9NW68 430 aaPredicted RBP24.47■■□□□ 1.51
NDUFA3-213ENST00000484103 TLL2Q9Y6L7 1015 aa24.47■■□□□ 1.51
NDUFA3-213ENST00000484103 ASTN2O75129 1339 aaPredicted RBP24.46■■□□□ 1.51
NDUFA3-213ENST00000484103 ADM5C9JUS6 153 aa24.46■■□□□ 1.51
NDUFA3-213ENST00000484103 AOC2O75106 756 aa24.46■■□□□ 1.51
NDUFA3-213ENST00000484103 ZC3H15Q8WU90 426 aaKnown RBP24.46■■□□□ 1.51
NDUFA3-213ENST00000484103 PGAP2Q9UHJ9 254 aa24.46■■□□□ 1.51
NDUFA3-213ENST00000484103 VIL1P09327 827 aaKnown RBP24.45■■□□□ 1.5
NDUFA3-213ENST00000484103 SLC4A10Q6U841 1118 aa24.45■■□□□ 1.5
NDUFA3-213ENST00000484103 KRT26Q7Z3Y9 468 aa24.45■■□□□ 1.5
NDUFA3-213ENST00000484103 MPHOSPH8Q99549 860 aa24.45■■□□□ 1.5
NDUFA3-213ENST00000484103 CCT4P50991 539 aaKnown RBP24.44■■□□□ 1.5
NDUFA3-213ENST00000484103 CASP7P55210 303 aa24.44■■□□□ 1.5
NDUFA3-213ENST00000484103 RSBN1LQ6PCB5 846 aaPredicted RBP24.44■■□□□ 1.5
NDUFA3-213ENST00000484103 DCPSQ96C86 337 aaKnown RBP24.44■■□□□ 1.5
NDUFA3-213ENST00000484103 MXD3Q9BW11 206 aa24.44■■□□□ 1.5
NDUFA3-213ENST00000484103 WBP1LQ9NX94 342 aa24.44■■□□□ 1.5
NDUFA3-213ENST00000484103 GGA3Q9NZ52 723 aa24.44■■□□□ 1.5
NDUFA3-213ENST00000484103 KLRK1P26718 216 aa24.43■■□□□ 1.5
NDUFA3-213ENST00000484103 ECE1P42892 770 aa24.43■■□□□ 1.5
NDUFA3-213ENST00000484103 CTCFP49711 727 aaPredicted RBP24.43■■□□□ 1.5
NDUFA3-213ENST00000484103 LBX1P52954 281 aa24.43■■□□□ 1.5
NDUFA3-213ENST00000484103 SAPCD2Q86UD0 394 aa24.43■■□□□ 1.5
NDUFA3-213ENST00000484103 SCAF8Q9UPN6 1271 aaKnown RBP24.43■■□□□ 1.5
NDUFA3-213ENST00000484103 USP17L3A6NCW0 530 aa24.41■■□□□ 1.5
NDUFA3-213ENST00000484103 USP17L4A6NCW7 530 aa24.41■■□□□ 1.5
NDUFA3-213ENST00000484103 KCNJ4P48050 445 aa24.41■■□□□ 1.5
NDUFA3-213ENST00000484103 BEND3Q5T5X7 828 aa24.41■■□□□ 1.5
NDUFA3-213ENST00000484103 USP17L1Q7RTZ2 530 aa24.41■■□□□ 1.5
NDUFA3-213ENST00000484103 TXNRD3Q86VQ6 643 aa24.41■■□□□ 1.5
NDUFA3-213ENST00000484103 PLA2G12BQ9BX93 195 aa24.41■■□□□ 1.5
NDUFA3-213ENST00000484103 TSKSQ9UJT2 592 aa24.41■■□□□ 1.5
NDUFA3-213ENST00000484103 MED23Q9ULK4 1368 aa24.41■■□□□ 1.5
NDUFA3-213ENST00000484103 ANKRD18BA2A2Z9 1011 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms