RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 CACNA1FO60840 1977 aa8.74□□□□□ -1.01
BRCA1-216ENST00000484087 PI4KAP2A4QPH2 592 aa8.73□□□□□ -1.01
BRCA1-216ENST00000484087 F6X3S4 739 aa8.73□□□□□ -1.01
BRCA1-216ENST00000484087 IGKV5-2P06315 115 aa8.73□□□□□ -1.01
BRCA1-216ENST00000484087 IFNL1Q8IU54 200 aa8.73□□□□□ -1.01
BRCA1-216ENST00000484087 DZIP1LQ8IYY4 767 aaKnown RBP8.73□□□□□ -1.01
BRCA1-216ENST00000484087 PI4KAP1Q8N8J0 262 aa8.73□□□□□ -1.01
BRCA1-216ENST00000484087 C7orf43Q8WVR3 580 aa8.73□□□□□ -1.01
BRCA1-216ENST00000484087 SSH1Q8WYL5 1049 aa8.73□□□□□ -1.01
BRCA1-216ENST00000484087 CNKSR1Q969H4 720 aa8.73□□□□□ -1.01
BRCA1-216ENST00000484087 CHMP4BQ9H444 224 aaKnown RBP8.73□□□□□ -1.01
BRCA1-216ENST00000484087 ZNF277Q9NRM2 450 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-216ENST00000484087 SH3TC1Q8TE82 1336 aa8.73□□□□□ -1.01
BRCA1-216ENST00000484087 PPEF1O14829 653 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-216ENST00000484087 FLIIQ13045 1269 aa8.72□□□□□ -1.01
BRCA1-216ENST00000484087 HSP90AB3PQ58FF7 597 aa8.72□□□□□ -1.01
BRCA1-216ENST00000484087 ATF7IPQ6VMQ6 1270 aa8.72□□□□□ -1.01
BRCA1-216ENST00000484087 PANK1Q8TE04 598 aa8.72□□□□□ -1.01
BRCA1-216ENST00000484087 CLUAP1Q96AJ1 413 aa8.72□□□□□ -1.01
BRCA1-216ENST00000484087 STK31Q9BXU1 1019 aa8.72□□□□□ -1.01
BRCA1-216ENST00000484087 TAOK3Q9H2K8 898 aa8.72□□□□□ -1.01
BRCA1-216ENST00000484087 COG6Q9Y2V7 657 aa8.72□□□□□ -1.01
BRCA1-216ENST00000484087 LTBP1Q14766 1721 aa8.71□□□□□ -1.01
BRCA1-216ENST00000484087 KIF3CO14782 793 aa8.71□□□□□ -1.01
BRCA1-216ENST00000484087 LMNB1P20700 586 aa8.71□□□□□ -1.01
BRCA1-216ENST00000484087 BRPF1P55201 1214 aaPredicted RBP8.71□□□□□ -1.01
BRCA1-216ENST00000484087 FKBP5Q13451 457 aaPredicted RBP8.71□□□□□ -1.01
BRCA1-216ENST00000484087 CCDC93Q567U6 631 aa8.71□□□□□ -1.01
BRCA1-216ENST00000484087 CELF1Q92879 486 aaKnown RBP8.71□□□□□ -1.01
BRCA1-216ENST00000484087 NLRP3Q96P20 1036 aa8.71□□□□□ -1.01
BRCA1-216ENST00000484087 METTL22Q9BUU2 404 aaPredicted RBP8.71□□□□□ -1.01
BRCA1-216ENST00000484087 SEC31BQ9NQW1 1179 aa8.71□□□□□ -1.01
BRCA1-216ENST00000484087 ZNF541Q9H0D2 1346 aa8.71□□□□□ -1.02
BRCA1-216ENST00000484087 A0A1B0GUL6 1792 aa8.71□□□□□ -1.02
BRCA1-216ENST00000484087 IRS4O14654 1257 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-216ENST00000484087 MVPQ14764 893 aaKnown RBP8.7□□□□□ -1.02
BRCA1-216ENST00000484087 KSR2Q6VAB6 950 aa8.7□□□□□ -1.02
BRCA1-216ENST00000484087 SLAIN1Q8ND83 568 aa8.7□□□□□ -1.02
BRCA1-216ENST00000484087 ARHGAP45Q92619 1136 aa8.7□□□□□ -1.02
BRCA1-216ENST00000484087 FAM212AQ96EL1 285 aa8.7□□□□□ -1.02
BRCA1-216ENST00000484087 RBM17Q96I25 401 aaKnown RBP8.7□□□□□ -1.02
BRCA1-216ENST00000484087 GPR101Q96P66 508 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-216ENST00000484087 NOB1Q9ULX3 412 aaKnown RBP8.7□□□□□ -1.02
BRCA1-216ENST00000484087 DDX19BQ9UMR2 479 aa8.7□□□□□ -1.02
BRCA1-216ENST00000484087 NEURL1BA8MQ27 555 aa8.7□□□□□ -1.02
BRCA1-216ENST00000484087 HOXA10P31260 410 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-216ENST00000484087 SLC10A5Q5PT55 438 aa8.7□□□□□ -1.02
BRCA1-216ENST00000484087 TMEM106CQ9BVX2 250 aa8.7□□□□□ -1.02
BRCA1-216ENST00000484087 RRAGCQ9HB90 399 aa8.7□□□□□ -1.02
BRCA1-216ENST00000484087 CWC25Q9NXE8 425 aaPredicted RBP8.7□□□□□ -1.02
BRCA1-216ENST00000484087 PDZRN3Q9UPQ7 1066 aa8.7□□□□□ -1.02
BRCA1-216ENST00000484087 WDR90Q96KV7 1748 aa8.69□□□□□ -1.02
BRCA1-216ENST00000484087 DDNO94850 711 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-216ENST00000484087 DDX58O95786 925 aaKnown RBP8.69□□□□□ -1.02
BRCA1-216ENST00000484087 TRIM27P14373 513 aa8.69□□□□□ -1.02
BRCA1-216ENST00000484087 ALDH1B1P30837 517 aa8.69□□□□□ -1.02
BRCA1-216ENST00000484087 C1QTNF8P60827 252 aa8.69□□□□□ -1.02
BRCA1-216ENST00000484087 FKBP4Q02790 459 aaKnown RBP eCLIP8.69□□□□□ -1.02
BRCA1-216ENST00000484087 NBR1Q14596 966 aa8.69□□□□□ -1.02
BRCA1-216ENST00000484087 UBE3BQ7Z3V4 1068 aa8.69□□□□□ -1.02
BRCA1-216ENST00000484087 ITPRIPQ8IWB1 547 aa8.69□□□□□ -1.02
BRCA1-216ENST00000484087 ZBTB38Q8NAP3 1195 aaPredicted RBP8.69□□□□□ -1.02
BRCA1-216ENST00000484087 CHMP4AQ9BY43 222 aa8.69□□□□□ -1.02
BRCA1-216ENST00000484087 API5Q9BZZ5 524 aaKnown RBP8.69□□□□□ -1.02
BRCA1-216ENST00000484087 KDM2BQ8NHM5 1336 aa8.68□□□□□ -1.02
BRCA1-216ENST00000484087 WTIPA6NIX2 430 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-216ENST00000484087 PCCAP05165 728 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-216ENST00000484087 GRAPQ13588 217 aa8.68□□□□□ -1.02
BRCA1-216ENST00000484087 AOC3Q16853 763 aa8.68□□□□□ -1.02
BRCA1-216ENST00000484087 SLC4A10Q6U841 1118 aa8.68□□□□□ -1.02
BRCA1-216ENST00000484087 DDX46Q7L014 1031 aaKnown RBP8.68□□□□□ -1.02
BRCA1-216ENST00000484087 MRPL50Q8N5N7 158 aaKnown RBP8.68□□□□□ -1.02
BRCA1-216ENST00000484087 GRAPLQ8TC17 118 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-216ENST00000484087 DNAAF4Q8WXU2 420 aa8.68□□□□□ -1.02
BRCA1-216ENST00000484087 CRAMP1Q96RY5 1269 aa8.68□□□□□ -1.02
BRCA1-216ENST00000484087 RWDD1Q9H446 243 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-216ENST00000484087 LTBP3Q9NS15 1303 aa8.68□□□□□ -1.02
BRCA1-216ENST00000484087 SCN9AQ15858 1988 aa8.67□□□□□ -1.02
BRCA1-216ENST00000484087 PCNTO95613 3336 aa8.67□□□□□ -1.02
BRCA1-216ENST00000484087 POTECB2RU33 542 aa8.67□□□□□ -1.02
BRCA1-216ENST00000484087 RLBP1P12271 317 aa8.67□□□□□ -1.02
BRCA1-216ENST00000484087 PLCG2P16885 1265 aa8.67□□□□□ -1.02
BRCA1-216ENST00000484087 IARSP41252 1262 aaKnown RBP8.67□□□□□ -1.02
BRCA1-216ENST00000484087 IRX5P78411 483 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-216ENST00000484087 TRIM28Q13263 835 aaKnown RBP8.67□□□□□ -1.02
BRCA1-216ENST00000484087 HS6ST3Q8IZP7 471 aa8.67□□□□□ -1.02
BRCA1-216ENST00000484087 CCDC191Q8NCU4 936 aa8.67□□□□□ -1.02
BRCA1-216ENST00000484087 GREM2Q9H772 168 aa8.67□□□□□ -1.02
BRCA1-216ENST00000484087 ATP6V0A2Q9Y487 856 aa8.67□□□□□ -1.02
BRCA1-216ENST00000484087 RBM19Q9Y4C8 960 aaKnown RBP8.67□□□□□ -1.02
BRCA1-216ENST00000484087 GLTPD2A6NH11 291 aa8.66□□□□□ -1.02
BRCA1-216ENST00000484087 GPSM2P81274 684 aa8.66□□□□□ -1.02
BRCA1-216ENST00000484087 HTRA3P83110 453 aa8.66□□□□□ -1.02
BRCA1-216ENST00000484087 NEXNQ0ZGT2 675 aa8.66□□□□□ -1.02
BRCA1-216ENST00000484087 GCKRQ14397 625 aa8.66□□□□□ -1.02
BRCA1-216ENST00000484087 FAM161AQ3B820 660 aa8.66□□□□□ -1.02
BRCA1-216ENST00000484087 BEND3Q5T5X7 828 aa8.66□□□□□ -1.02
BRCA1-216ENST00000484087 TNNQ9UQP3 1299 aa8.66□□□□□ -1.02
BRCA1-216ENST00000484087 ZNF646O15015 1829 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-216ENST00000484087 PPIP5K2O43314 1243 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms