RNA–Protein interactions for RNA: ENST00000484042.1

FXR1-217, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 4

Gene FXR1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-217ENST00000484042 HOXD8P13378 290 aaPredicted RBP9.08□□□□□ -0.96
FXR1-217ENST00000484042 KRT25Q7Z3Z0 450 aa9.08□□□□□ -0.96
FXR1-217ENST00000484042 ELP3Q9H9T3 547 aa9.08□□□□□ -0.96
FXR1-217ENST00000484042 MAPK1P28482 360 aa9.07□□□□□ -0.96
FXR1-217ENST00000484042 C8orf34Q49A92 452 aa9.07□□□□□ -0.96
FXR1-217ENST00000484042 ZNF438Q7Z4V0 828 aa9.07□□□□□ -0.96
FXR1-217ENST00000484042 TTC16Q8NEE8 873 aa9.07□□□□□ -0.96
FXR1-217ENST00000484042 ALKBH8Q96BT7 664 aaKnown RBP9.07□□□□□ -0.96
FXR1-217ENST00000484042 DMRTB1Q96MA1 342 aa9.07□□□□□ -0.96
FXR1-217ENST00000484042 A6NHS1 94 aa9.06□□□□□ -0.96
FXR1-217ENST00000484042 MMP20O60882 483 aa9.06□□□□□ -0.96
FXR1-217ENST00000484042 ALAS2P22557 587 aa9.06□□□□□ -0.96
FXR1-217ENST00000484042 SOX18P35713 384 aa9.06□□□□□ -0.96
FXR1-217ENST00000484042 TMC7Q7Z402 723 aa9.06□□□□□ -0.96
FXR1-217ENST00000484042 ASB16Q96NS5 453 aa9.06□□□□□ -0.96
FXR1-217ENST00000484042 ABI2Q9NYB9 513 aaPredicted RBP9.06□□□□□ -0.96
FXR1-217ENST00000484042 TLR7Q9NYK1 1049 aaKnown RBP9.06□□□□□ -0.96
FXR1-217ENST00000484042 TMEM63CQ9P1W3 806 aa9.06□□□□□ -0.96
FXR1-217ENST00000484042 DHX32Q7L7V1 743 aaKnown RBP9.05□□□□□ -0.96
FXR1-217ENST00000484042 OR13H1Q8NG92 308 aa9.05□□□□□ -0.96
FXR1-217ENST00000484042 GPR182O15218 404 aa9.04□□□□□ -0.96
FXR1-217ENST00000484042 TNFRSF21O75509 655 aa9.04□□□□□ -0.96
FXR1-217ENST00000484042 NRLP54845 237 aa9.04□□□□□ -0.96
FXR1-217ENST00000484042 GPLD1P80108 840 aa9.04□□□□□ -0.96
FXR1-217ENST00000484042 COL9A3Q14050 684 aaPredicted RBP9.04□□□□□ -0.96
FXR1-217ENST00000484042 RSPO4Q2I0M5 234 aaPredicted RBP9.04□□□□□ -0.96
FXR1-217ENST00000484042 CCDC27Q2M243 656 aa9.04□□□□□ -0.96
FXR1-217ENST00000484042 ZMYM1Q5SVZ6 1142 aa9.04□□□□□ -0.96
FXR1-217ENST00000484042 TRPM4Q8TD43 1214 aa9.04□□□□□ -0.96
FXR1-217ENST00000484042 SNX29Q8TEQ0 813 aa9.04□□□□□ -0.96
FXR1-217ENST00000484042 PSMG3-AS1Q96PY0 264 aa9.04□□□□□ -0.96
FXR1-217ENST00000484042 PCSK7Q16549 785 aa9.03□□□□□ -0.96
FXR1-217ENST00000484042 TMCO4Q5TGY1 634 aa9.03□□□□□ -0.96
FXR1-217ENST00000484042 TTC39BQ5VTQ0 682 aaPredicted RBP9.03□□□□□ -0.96
FXR1-217ENST00000484042 DNAJC14Q6Y2X3 702 aaPredicted RBP9.03□□□□□ -0.96
FXR1-217ENST00000484042 ZSCAN29Q8IWY8 852 aaPredicted RBP9.03□□□□□ -0.96
FXR1-217ENST00000484042 SPDYE3A6NKU9 549 aa9.02□□□□□ -0.97
FXR1-217ENST00000484042 TREHO43280 583 aa9.02□□□□□ -0.97
FXR1-217ENST00000484042 PSAPP07602 524 aa9.02□□□□□ -0.97
FXR1-217ENST00000484042 ADH7P40394 386 aa9.02□□□□□ -0.97
FXR1-217ENST00000484042 PLAURQ03405 335 aa9.02□□□□□ -0.97
FXR1-217ENST00000484042 DSC3Q14574 896 aa9.02□□□□□ -0.97
FXR1-217ENST00000484042 PRRT3Q5FWE3 981 aa9.02□□□□□ -0.97
FXR1-217ENST00000484042 NKAPLQ5M9Q1 402 aa9.02□□□□□ -0.97
FXR1-217ENST00000484042 UBE2OQ9C0C9 1292 aaKnown RBP9.02□□□□□ -0.97
FXR1-217ENST00000484042 CHRDQ9H2X0 955 aa9.02□□□□□ -0.97
FXR1-217ENST00000484042 DNAJB12Q9NXW2 375 aaKnown RBP9.02□□□□□ -0.97
FXR1-217ENST00000484042 CNTN3Q9P232 1028 aa9.02□□□□□ -0.97
FXR1-217ENST00000484042 STARD13Q9Y3M8 1113 aa9.02□□□□□ -0.97
FXR1-217ENST00000484042 ZBTB42B2RXF5 422 aa9.01□□□□□ -0.97
FXR1-217ENST00000484042 M0R082 166 aa9.01□□□□□ -0.97
FXR1-217ENST00000484042 NEFLP07196 543 aa9.01□□□□□ -0.97
FXR1-217ENST00000484042 ZNF417Q8TAU3 575 aa9.01□□□□□ -0.97
FXR1-217ENST00000484042 TMC1Q8TDI8 760 aa9.01□□□□□ -0.97
FXR1-217ENST00000484042 ZNF587Q96SQ5 575 aaPredicted RBP9.01□□□□□ -0.97
FXR1-217ENST00000484042 TPSG1Q9NRR2 321 aa9.01□□□□□ -0.97
FXR1-217ENST00000484042 SLC6A14Q9UN76 642 aa9.01□□□□□ -0.97
FXR1-217ENST00000484042 FAM229AH3BQW9 127 aa9□□□□□ -0.97
FXR1-217ENST00000484042 KIF4AO95239 1232 aa9□□□□□ -0.97
FXR1-217ENST00000484042 APBA3O96018 575 aa9□□□□□ -0.97
FXR1-217ENST00000484042 C8orf86Q6ZUL3 223 aa9□□□□□ -0.97
FXR1-217ENST00000484042 C1orf127Q8N9H9 656 aa9□□□□□ -0.97
FXR1-217ENST00000484042 PMEPA1Q969W9 287 aa9□□□□□ -0.97
FXR1-217ENST00000484042 PODXL2Q9NZ53 605 aa9□□□□□ -0.97
FXR1-217ENST00000484042 FOXD3Q9UJU5 478 aaPredicted RBP9□□□□□ -0.97
FXR1-217ENST00000484042 PHACTR2O75167 634 aa8.99□□□□□ -0.97
FXR1-217ENST00000484042 FMR1Q06787 632 aaKnown RBP eCLIP8.99□□□□□ -0.97
FXR1-217ENST00000484042 FOXD4L6Q3SYB3 417 aaPredicted RBP8.99□□□□□ -0.97
FXR1-217ENST00000484042 FOXD4L3Q6VB84 417 aaPredicted RBP8.99□□□□□ -0.97
FXR1-217ENST00000484042 MICALL1Q8N3F8 863 aa8.99□□□□□ -0.97
FXR1-217ENST00000484042 NIF3L1Q9GZT8 377 aa8.99□□□□□ -0.97
FXR1-217ENST00000484042 ZFYVE28Q9HCC9 887 aa8.99□□□□□ -0.97
FXR1-217ENST00000484042 PRDM6Q9NQX0 595 aa8.99□□□□□ -0.97
FXR1-217ENST00000484042 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.98□□□□□ -0.97
FXR1-217ENST00000484042 ALBP02768 609 aa8.98□□□□□ -0.97
FXR1-217ENST00000484042 CYP2E1P05181 493 aaPredicted RBP8.98□□□□□ -0.97
FXR1-217ENST00000484042 ERCC3P19447 782 aa8.98□□□□□ -0.97
FXR1-217ENST00000484042 COL19A1Q14993 1142 aa8.98□□□□□ -0.97
FXR1-217ENST00000484042 KRTAP9-2Q9BYQ4 174 aa8.98□□□□□ -0.97
FXR1-217ENST00000484042 DNAJC25Q9H1X3 360 aa8.98□□□□□ -0.97
FXR1-217ENST00000484042 LOC102724428A0A0B4J2F2 783 aa8.97□□□□□ -0.97
FXR1-217ENST00000484042 CES1P23141 567 aa8.97□□□□□ -0.97
FXR1-217ENST00000484042 SIK1P57059 783 aa8.97□□□□□ -0.97
FXR1-217ENST00000484042 HYAL2Q12891 473 aa8.97□□□□□ -0.97
FXR1-217ENST00000484042 TRIM28Q13263 835 aaKnown RBP8.97□□□□□ -0.97
FXR1-217ENST00000484042 ORC1Q13415 861 aa8.97□□□□□ -0.97
FXR1-217ENST00000484042 COL13A1Q5TAT6 717 aaPredicted RBP8.97□□□□□ -0.97
FXR1-217ENST00000484042 IGFLR1Q9H665 355 aa8.97□□□□□ -0.97
FXR1-217ENST00000484042 SALL4Q9UJQ4 1053 aa8.97□□□□□ -0.97
FXR1-217ENST00000484042 NAGPAQ9UK23 515 aa8.97□□□□□ -0.97
FXR1-217ENST00000484042 ANKRD33BA6NCL7 494 aa8.96□□□□□ -0.98
FXR1-217ENST00000484042 NID1P14543 1247 aa8.96□□□□□ -0.98
FXR1-217ENST00000484042 PLCB3Q01970 1234 aa8.96□□□□□ -0.98
FXR1-217ENST00000484042 TBC1D8BQ0IIM8 1120 aa8.96□□□□□ -0.98
FXR1-217ENST00000484042 NSUN5Q96P11 429 aaKnown RBP8.96□□□□□ -0.98
FXR1-217ENST00000484042 FRRS1LQ9P0K9 344 aa8.96□□□□□ -0.98
FXR1-217ENST00000484042 AMOTL2Q9Y2J4 779 aa8.96□□□□□ -0.98
FXR1-217ENST00000484042 EREGO14944 169 aa8.95□□□□□ -0.98
FXR1-217ENST00000484042 DYRK3O43781 588 aa8.95□□□□□ -0.98
FXR1-217ENST00000484042 CPNE3O75131 537 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms