RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 IPO8O15397 1037 aaKnown RBP22.69■■□□□ 1.22
HDAC6-225ENST00000483506 EIF6P56537 245 aaKnown RBP22.69■■□□□ 1.22
HDAC6-225ENST00000483506 IFIT5Q13325 482 aaKnown RBP22.69■■□□□ 1.22
HDAC6-225ENST00000483506 GPC2Q8N158 579 aa22.69■■□□□ 1.22
HDAC6-225ENST00000483506 EYA3Q99504 573 aa22.69■■□□□ 1.22
HDAC6-225ENST00000483506 ANKIB1Q9P2G1 1089 aa22.69■■□□□ 1.22
HDAC6-225ENST00000483506 GGA1Q9UJY5 639 aa22.69■■□□□ 1.22
HDAC6-225ENST00000483506 ZNRF3Q9ULT6 936 aa22.69■■□□□ 1.22
HDAC6-225ENST00000483506 TOMM70O94826 608 aa22.68■■□□□ 1.22
HDAC6-225ENST00000483506 WASHC4Q2M389 1173 aa22.68■■□□□ 1.22
HDAC6-225ENST00000483506 INTS3Q68E01 1043 aaKnown RBP22.68■■□□□ 1.22
HDAC6-225ENST00000483506 ATF7IPQ6VMQ6 1270 aa22.68■■□□□ 1.22
HDAC6-225ENST00000483506 A0A1B0GUL6 1792 aa22.68■■□□□ 1.22
HDAC6-225ENST00000483506 C6orf229H3BNL8 230 aa22.67■■□□□ 1.22
HDAC6-225ENST00000483506 UFL1O94874 794 aa22.67■■□□□ 1.22
HDAC6-225ENST00000483506 TRIM27P14373 513 aa22.67■■□□□ 1.22
HDAC6-225ENST00000483506 ANKRD44Q8N8A2 993 aa22.67■■□□□ 1.22
HDAC6-225ENST00000483506 ATP2B4P23634 1241 aa22.66■■□□□ 1.22
HDAC6-225ENST00000483506 RBM46Q8TBY0 533 aaKnown RBP22.66■■□□□ 1.22
HDAC6-225ENST00000483506 MPHOSPH8Q99549 860 aa22.66■■□□□ 1.22
HDAC6-225ENST00000483506 BICC1Q9H694 974 aaKnown RBP22.66■■□□□ 1.22
HDAC6-225ENST00000483506 CHMP3Q9Y3E7 222 aa22.66■■□□□ 1.22
HDAC6-225ENST00000483506 IQCA1LA6NCM1 817 aa22.65■■□□□ 1.22
HDAC6-225ENST00000483506 CCDC57Q2TAC2 916 aa22.65■■□□□ 1.22
HDAC6-225ENST00000483506 YDJCA8MPS7 323 aa22.64■■□□□ 1.21
HDAC6-225ENST00000483506 ANKRD2Q9GZV1 360 aa22.64■■□□□ 1.21
HDAC6-225ENST00000483506 MED23Q9ULK4 1368 aa22.63■■□□□ 1.21
HDAC6-225ENST00000483506 CXCL9Q07325 125 aa22.63■■□□□ 1.21
HDAC6-225ENST00000483506 ZKSCAN2Q63HK3 967 aa22.63■■□□□ 1.21
HDAC6-225ENST00000483506 C16orf71Q8IYS4 520 aaPredicted RBP22.63■■□□□ 1.21
HDAC6-225ENST00000483506 GPR101Q96P66 508 aaPredicted RBP22.63■■□□□ 1.21
HDAC6-225ENST00000483506 ZC3H12CQ9C0D7 883 aaKnown RBP22.63■■□□□ 1.21
HDAC6-225ENST00000483506 LEMD3Q9Y2U8 911 aa22.63■■□□□ 1.21
HDAC6-225ENST00000483506 CHRNDQ07001 517 aa22.62■■□□□ 1.21
HDAC6-225ENST00000483506 FRAT1Q92837 279 aaPredicted RBP22.62■■□□□ 1.21
HDAC6-225ENST00000483506 RIMBP2O15034 1052 aa22.61■■□□□ 1.21
HDAC6-225ENST00000483506 UBTFL1P0CB47 393 aaPredicted RBP22.61■■□□□ 1.21
HDAC6-225ENST00000483506 TAF1DQ9H5J8 278 aaPredicted RBP22.61■■□□□ 1.21
HDAC6-225ENST00000483506 DBNDD1Q9H9R9 158 aa22.61■■□□□ 1.21
HDAC6-225ENST00000483506 SCN9AQ15858 1988 aa22.61■■□□□ 1.21
HDAC6-225ENST00000483506 PSME4Q14997 1843 aa22.61■■□□□ 1.21
HDAC6-225ENST00000483506 ECE2O60344 883 aa22.6■■□□□ 1.21
HDAC6-225ENST00000483506 SCNN1DP51172 638 aa22.6■■□□□ 1.21
HDAC6-225ENST00000483506 FSTL1Q12841 308 aa22.6■■□□□ 1.21
HDAC6-225ENST00000483506 TNIP1Q15025 636 aa22.6■■□□□ 1.21
HDAC6-225ENST00000483506 CIAPIN1Q6FI81 312 aa22.6■■□□□ 1.21
HDAC6-225ENST00000483506 ZNF594Q96JF6 807 aaPredicted RBP22.6■■□□□ 1.21
HDAC6-225ENST00000483506 HACL1Q9UJ83 578 aa22.6■■□□□ 1.21
HDAC6-225ENST00000483506 HDAC5Q9UQL6 1122 aa22.6■■□□□ 1.21
HDAC6-225ENST00000483506 TNNQ9UQP3 1299 aa22.6■■□□□ 1.21
HDAC6-225ENST00000483506 GJA3Q9Y6H8 435 aa22.6■■□□□ 1.21
HDAC6-225ENST00000483506 ADAMTSL1Q8N6G6 1762 aa22.6■■□□□ 1.21
HDAC6-225ENST00000483506 TAF7LQ5H9L4 462 aa22.59■■□□□ 1.21
HDAC6-225ENST00000483506 LDHAL6AQ6ZMR3 332 aa22.59■■□□□ 1.21
HDAC6-225ENST00000483506 MEIS3Q99687 375 aa22.59■■□□□ 1.21
HDAC6-225ENST00000483506 ZNF804BA4D1E1 1349 aa22.58■■□□□ 1.21
HDAC6-225ENST00000483506 ZNF609O15014 1411 aa22.58■■□□□ 1.21
HDAC6-225ENST00000483506 WTIPA6NIX2 430 aaPredicted RBP22.58■■□□□ 1.21
HDAC6-225ENST00000483506 RAD17O75943 681 aa22.58■■□□□ 1.21
HDAC6-225ENST00000483506 DOK7Q18PE1 504 aa22.58■■□□□ 1.21
HDAC6-225ENST00000483506 IRS2Q9Y4H2 1338 aa22.57■■□□□ 1.2
HDAC6-225ENST00000483506 GNAI3P08754 354 aa22.57■■□□□ 1.2
HDAC6-225ENST00000483506 C15orf52Q6ZUT6 534 aaKnown RBP22.57■■□□□ 1.2
HDAC6-225ENST00000483506 SMC1BQ8NDV3 1235 aa22.57■■□□□ 1.2
HDAC6-225ENST00000483506 EPHX2P34913 555 aa22.56■■□□□ 1.2
HDAC6-225ENST00000483506 RFX5P48382 616 aaPredicted RBP22.56■■□□□ 1.2
HDAC6-225ENST00000483506 PODNQ7Z5L7 613 aa22.56■■□□□ 1.2
HDAC6-225ENST00000483506 CLUAP1Q96AJ1 413 aa22.56■■□□□ 1.2
HDAC6-225ENST00000483506 CNNM1Q9NRU3 951 aa22.56■■□□□ 1.2
HDAC6-225ENST00000483506 RIPOR2Q9Y4F9 1068 aa22.56■■□□□ 1.2
HDAC6-225ENST00000483506 LRRFIP2Q9Y608 721 aaKnown RBP22.56■■□□□ 1.2
HDAC6-225ENST00000483506 ZNF646O15015 1829 aaPredicted RBP22.55■■□□□ 1.2
HDAC6-225ENST00000483506 PSMD14O00487 310 aa22.55■■□□□ 1.2
HDAC6-225ENST00000483506 LMOD1P29536 600 aaPredicted RBP22.55■■□□□ 1.2
HDAC6-225ENST00000483506 TMEM57Q8N5G2 664 aa22.55■■□□□ 1.2
HDAC6-225ENST00000483506 GPRC5DQ9NZD1 345 aa22.55■■□□□ 1.2
HDAC6-225ENST00000483506 MROH5Q6ZUA9 1318 aa22.55■■□□□ 1.2
HDAC6-225ENST00000483506 TAF5LO75529 589 aa22.54■■□□□ 1.2
HDAC6-225ENST00000483506 GMPSP49915 693 aaPredicted RBP22.54■■□□□ 1.2
HDAC6-225ENST00000483506 PNMA8AQ86V59 439 aaPredicted RBP22.54■■□□□ 1.2
HDAC6-225ENST00000483506 TXNRD3Q86VQ6 643 aa22.54■■□□□ 1.2
HDAC6-225ENST00000483506 LDHDQ86WU2 507 aa22.54■■□□□ 1.2
HDAC6-225ENST00000483506 DZIP1LQ8IYY4 767 aaKnown RBP22.54■■□□□ 1.2
HDAC6-225ENST00000483506 DPF2Q92785 391 aa22.54■■□□□ 1.2
HDAC6-225ENST00000483506 PUS3Q9BZE2 481 aaKnown RBP22.54■■□□□ 1.2
HDAC6-225ENST00000483506 KCNQ5Q9NR82 932 aa22.54■■□□□ 1.2
HDAC6-225ENST00000483506 VIL1P09327 827 aaKnown RBP22.53■■□□□ 1.2
HDAC6-225ENST00000483506 RPS12P25398 132 aaKnown RBP22.53■■□□□ 1.2
HDAC6-225ENST00000483506 KLRK1P26718 216 aa22.53■■□□□ 1.2
HDAC6-225ENST00000483506 EPS15P42566 896 aa22.53■■□□□ 1.2
HDAC6-225ENST00000483506 KCNJ4P48050 445 aa22.53■■□□□ 1.2
HDAC6-225ENST00000483506 HELBQ8NG08 1087 aaPredicted RBP22.53■■□□□ 1.2
HDAC6-225ENST00000483506 COA1Q9GZY4 146 aa22.53■■□□□ 1.2
HDAC6-225ENST00000483506 G3V3G9 751 aa22.52■■□□□ 1.2
HDAC6-225ENST00000483506 POTEIP0CG38 1075 aa22.52■■□□□ 1.2
HDAC6-225ENST00000483506 POTEJP0CG39 1038 aa22.52■■□□□ 1.2
HDAC6-225ENST00000483506 HSPA6P17066 643 aa22.52■■□□□ 1.2
HDAC6-225ENST00000483506 PTPN12Q05209 780 aaKnown RBP22.52■■□□□ 1.2
HDAC6-225ENST00000483506 MTX1Q13505 466 aa22.52■■□□□ 1.2
HDAC6-225ENST00000483506 DCAF8Q5TAQ9 597 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms