RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 BICC1Q9H694 974 aaKnown RBP13.08□□□□□ -0.32
EWSR1-217ENST00000483415 NAP1L2Q9ULW6 460 aaPredicted RBP13.08□□□□□ -0.32
EWSR1-217ENST00000483415 CRY2Q49AN0 593 aa13.07□□□□□ -0.32
EWSR1-217ENST00000483415 TBC1D9BQ66K14 1250 aa13.07□□□□□ -0.32
EWSR1-217ENST00000483415 TMEM51Q9NW97 253 aa13.07□□□□□ -0.32
EWSR1-217ENST00000483415 MAST2Q6P0Q8 1798 aa13.07□□□□□ -0.32
EWSR1-217ENST00000483415 CCDC152Q4G0S7 254 aa13.07□□□□□ -0.32
EWSR1-217ENST00000483415 GRIPAP1Q4V328 841 aa13.07□□□□□ -0.32
EWSR1-217ENST00000483415 UBE3BQ7Z3V4 1068 aa13.07□□□□□ -0.32
EWSR1-217ENST00000483415 KIF1BPQ96EK5 621 aa13.07□□□□□ -0.32
EWSR1-217ENST00000483415 TRMT112Q9UI30 125 aaKnown RBP13.07□□□□□ -0.32
EWSR1-217ENST00000483415 POLRMTO00411 1230 aaKnown RBP13.07□□□□□ -0.32
EWSR1-217ENST00000483415 IRS4O14654 1257 aaPredicted RBP13.07□□□□□ -0.32
EWSR1-217ENST00000483415 COL23A1Q86Y22 540 aaPredicted RBP13.07□□□□□ -0.32
EWSR1-217ENST00000483415 RFX7Q2KHR2 1363 aa13.07□□□□□ -0.32
EWSR1-217ENST00000483415 KIF20AO95235 890 aa13.06□□□□□ -0.32
EWSR1-217ENST00000483415 HOXA10P31260 410 aaPredicted RBP13.06□□□□□ -0.32
EWSR1-217ENST00000483415 PIP4K2AP48426 406 aaPredicted RBP13.06□□□□□ -0.32
EWSR1-217ENST00000483415 GTPBP4Q9BZE4 634 aaKnown RBP13.06□□□□□ -0.32
EWSR1-217ENST00000483415 TFCP2L1Q9NZI6 479 aa13.06□□□□□ -0.32
EWSR1-217ENST00000483415 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
EWSR1-217ENST00000483415 PSME4Q14997 1843 aa13.06□□□□□ -0.32
EWSR1-217ENST00000483415 MYH13Q9UKX3 1938 aa13.06□□□□□ -0.32
EWSR1-217ENST00000483415 ST5P78524 1137 aa13.06□□□□□ -0.32
EWSR1-217ENST00000483415 TTLL11Q8NHH1 800 aa13.06□□□□□ -0.32
EWSR1-217ENST00000483415 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.06□□□□□ -0.32
EWSR1-217ENST00000483415 SALL3Q9BXA9 1300 aa13.06□□□□□ -0.32
EWSR1-217ENST00000483415 PTMSP20962 102 aa13.05□□□□□ -0.32
EWSR1-217ENST00000483415 IL15P40933 162 aaPredicted RBP13.05□□□□□ -0.32
EWSR1-217ENST00000483415 EN1Q05925 392 aaPredicted RBP13.05□□□□□ -0.32
EWSR1-217ENST00000483415 NFIXQ14938 502 aa13.05□□□□□ -0.32
EWSR1-217ENST00000483415 STAP2Q9UGK3 403 aa13.05□□□□□ -0.32
EWSR1-217ENST00000483415 ATP5J2-PTCD1G3V325 749 aa13.05□□□□□ -0.32
EWSR1-217ENST00000483415 NCLP19338 710 aaKnown RBP13.05□□□□□ -0.32
EWSR1-217ENST00000483415 TMED8Q6PL24 325 aaPredicted RBP13.05□□□□□ -0.32
EWSR1-217ENST00000483415 ZNF609O15014 1411 aa13.05□□□□□ -0.32
EWSR1-217ENST00000483415 MROH5Q6ZUA9 1318 aa13.05□□□□□ -0.32
EWSR1-217ENST00000483415 MYH7P12883 1935 aa13.05□□□□□ -0.32
EWSR1-217ENST00000483415 SASS6Q6UVJ0 657 aa13.05□□□□□ -0.32
EWSR1-217ENST00000483415 SNX21Q969T3 373 aa13.05□□□□□ -0.32
EWSR1-217ENST00000483415 CDC5LQ99459 802 aaKnown RBP13.05□□□□□ -0.32
EWSR1-217ENST00000483415 TTC41PQ6P2S7 1318 aa13.04□□□□□ -0.32
EWSR1-217ENST00000483415 SRGAP3O43295 1099 aa13.04□□□□□ -0.32
EWSR1-217ENST00000483415 CHD1LQ86WJ1 897 aa13.04□□□□□ -0.32
EWSR1-217ENST00000483415 CRAMP1Q96RY5 1269 aa13.04□□□□□ -0.32
EWSR1-217ENST00000483415 ANKRD18BA2A2Z9 1011 aa13.04□□□□□ -0.32
EWSR1-217ENST00000483415 PTPN12Q05209 780 aaKnown RBP13.04□□□□□ -0.32
EWSR1-217ENST00000483415 CLEC17AQ6ZS10 378 aa13.04□□□□□ -0.32
EWSR1-217ENST00000483415 ZNF512BQ96KM6 892 aaPredicted RBP13.04□□□□□ -0.32
EWSR1-217ENST00000483415 GBP4Q96PP9 640 aa13.04□□□□□ -0.32
EWSR1-217ENST00000483415 ARID3AQ99856 593 aa13.04□□□□□ -0.32
EWSR1-217ENST00000483415 BRIP1Q9BX63 1249 aa13.04□□□□□ -0.32
EWSR1-217ENST00000483415 LRRCC1Q9C099 1032 aa13.04□□□□□ -0.32
EWSR1-217ENST00000483415 PNMA6EA0A0J9YXQ4 647 aa13.03□□□□□ -0.32
EWSR1-217ENST00000483415 AMIGO3Q86WK7 504 aa13.03□□□□□ -0.32
EWSR1-217ENST00000483415 IPO4Q8TEX9 1081 aaKnown RBP13.03□□□□□ -0.32
EWSR1-217ENST00000483415 ZNF445P59923 1031 aa13.03□□□□□ -0.32
EWSR1-217ENST00000483415 CSPP1Q1MSJ5 1256 aa13.03□□□□□ -0.32
EWSR1-217ENST00000483415 C15orf52Q6ZUT6 534 aaKnown RBP13.03□□□□□ -0.32
EWSR1-217ENST00000483415 NBPF5PQ86XG9 351 aaPredicted RBP13.03□□□□□ -0.32
EWSR1-217ENST00000483415 HSCBQ8IWL3 235 aa13.03□□□□□ -0.32
EWSR1-217ENST00000483415 ZKSCAN5Q9Y2L8 839 aa13.03□□□□□ -0.32
EWSR1-217ENST00000483415 EYA2O00167 538 aa13.02□□□□□ -0.32
EWSR1-217ENST00000483415 IFIT5Q13325 482 aaKnown RBP13.02□□□□□ -0.32
EWSR1-217ENST00000483415 EPHA10Q5JZY3 1008 aa13.02□□□□□ -0.32
EWSR1-217ENST00000483415 CNBD1Q8NA66 436 aa13.02□□□□□ -0.32
EWSR1-217ENST00000483415 SRP68Q9UHB9 627 aaKnown RBP13.02□□□□□ -0.32
EWSR1-217ENST00000483415 PDE6BP35913 854 aa13.02□□□□□ -0.33
EWSR1-217ENST00000483415 CCDC57Q2TAC2 916 aa13.02□□□□□ -0.33
EWSR1-217ENST00000483415 STYK1Q6J9G0 422 aa13.02□□□□□ -0.33
EWSR1-217ENST00000483415 LMBR1LQ6UX01 489 aa13.02□□□□□ -0.33
EWSR1-217ENST00000483415 NLRP3Q96P20 1036 aa13.02□□□□□ -0.33
EWSR1-217ENST00000483415 AKAP2Q9Y2D5 859 aa13.02□□□□□ -0.33
EWSR1-217ENST00000483415 PDS5AQ29RF7 1337 aaKnown RBP13.02□□□□□ -0.33
EWSR1-217ENST00000483415 LETM1O95202 739 aaPredicted RBP13.01□□□□□ -0.33
EWSR1-217ENST00000483415 SERPINB2P05120 415 aa13.01□□□□□ -0.33
EWSR1-217ENST00000483415 MCM5P33992 734 aa13.01□□□□□ -0.33
EWSR1-217ENST00000483415 PRR5LQ6MZQ0 368 aa13.01□□□□□ -0.33
EWSR1-217ENST00000483415 ZNF710Q8N1W2 664 aa13.01□□□□□ -0.33
EWSR1-217ENST00000483415 ZNF646O15015 1829 aaPredicted RBP13.01□□□□□ -0.33
EWSR1-217ENST00000483415 G3BP1Q13283 466 aaKnown RBP eCLIP13.01□□□□□ -0.338e-7■□□□□ 10.5
EWSR1-217ENST00000483415 KLHL40Q2TBA0 621 aa13.01□□□□□ -0.33
EWSR1-217ENST00000483415 PARP3Q9Y6F1 533 aa13.01□□□□□ -0.33
EWSR1-217ENST00000483415 RHPN1Q8TCX5 695 aa13.01□□□□□ -0.33
EWSR1-217ENST00000483415 MTFR1LQ9H019 292 aa13□□□□□ -0.33
EWSR1-217ENST00000483415 BSDC1Q9NW68 430 aaPredicted RBP13□□□□□ -0.33
EWSR1-217ENST00000483415 AKAP11Q9UKA4 1901 aa13□□□□□ -0.33
EWSR1-217ENST00000483415 RBM25P49756 843 aaKnown RBP13□□□□□ -0.33
EWSR1-217ENST00000483415 DDR1Q08345 913 aa13□□□□□ -0.33
EWSR1-217ENST00000483415 FAM89AQ96GI7 184 aa13□□□□□ -0.33
EWSR1-217ENST00000483415 C1orf115Q9H7X2 142 aa13□□□□□ -0.33
EWSR1-217ENST00000483415 ZNF330Q9Y3S2 320 aaPredicted RBP13□□□□□ -0.33
EWSR1-217ENST00000483415 EPB41L2O43491 1005 aaKnown RBP13□□□□□ -0.33
EWSR1-217ENST00000483415 GPTP24298 496 aa13□□□□□ -0.33
EWSR1-217ENST00000483415 MFAP1P55081 439 aaKnown RBP13□□□□□ -0.33
EWSR1-217ENST00000483415 ERFEQ4G0M1 354 aa13□□□□□ -0.33
EWSR1-217ENST00000483415 ANP32BQ92688 251 aaKnown RBP13□□□□□ -0.33
EWSR1-217ENST00000483415 RBM17Q96I25 401 aaKnown RBP13□□□□□ -0.33
EWSR1-217ENST00000483415 RIPOR2Q9Y4F9 1068 aa13□□□□□ -0.33
EWSR1-217ENST00000483415 ATG9AQ7Z3C6 839 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms