RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 LGR6Q9HBX8 967 aa7.91□□□□□ -1.14
CSDE1-207ENST00000483407 NARFQ9UHQ1 456 aa7.91□□□□□ -1.14
CSDE1-207ENST00000483407 NDUFB9Q9Y6M9 179 aa7.91□□□□□ -1.14
CSDE1-207ENST00000483407 KIF13BQ9NQT8 1826 aa7.9□□□□□ -1.14
CSDE1-207ENST00000483407 COL15A1P39059 1388 aa7.9□□□□□ -1.14
CSDE1-207ENST00000483407 ZC3H4Q9UPT8 1303 aaKnown RBP7.9□□□□□ -1.14
CSDE1-207ENST00000483407 CFAP99D6REC4 459 aa7.9□□□□□ -1.14
CSDE1-207ENST00000483407 DIAPH1O60610 1272 aaKnown RBP7.9□□□□□ -1.14
CSDE1-207ENST00000483407 STARD3NLO95772 234 aa7.9□□□□□ -1.14
CSDE1-207ENST00000483407 NFIXQ14938 502 aa7.9□□□□□ -1.14
CSDE1-207ENST00000483407 MTHFSDQ2M296 383 aaKnown RBP7.9□□□□□ -1.14
CSDE1-207ENST00000483407 KMT5BQ4FZB7 885 aa7.9□□□□□ -1.14
CSDE1-207ENST00000483407 TTC5Q8N0Z6 440 aa7.9□□□□□ -1.14
CSDE1-207ENST00000483407 MRPL50Q8N5N7 158 aaKnown RBP7.9□□□□□ -1.14
CSDE1-207ENST00000483407 HELBQ8NG08 1087 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-207ENST00000483407 HMX1Q9NP08 348 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-207ENST00000483407 ZBTB1Q9Y2K1 713 aa7.9□□□□□ -1.14
CSDE1-207ENST00000483407 COL5A3P25940 1745 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-207ENST00000483407 A0A087WZG4 1122 aa7.89□□□□□ -1.15
CSDE1-207ENST00000483407 C6orf229H3BNL8 230 aa7.89□□□□□ -1.15
CSDE1-207ENST00000483407 SERPINB2P05120 415 aa7.89□□□□□ -1.15
CSDE1-207ENST00000483407 LMNB1P20700 586 aa7.89□□□□□ -1.15
CSDE1-207ENST00000483407 NPM2Q86SE8 214 aaKnown RBP7.89□□□□□ -1.15
CSDE1-207ENST00000483407 DNAJC5GQ8N7S2 189 aa7.89□□□□□ -1.15
CSDE1-207ENST00000483407 TTLL6Q8N841 843 aa7.89□□□□□ -1.15
CSDE1-207ENST00000483407 TRIM34Q9BYJ4 488 aa7.89□□□□□ -1.15
CSDE1-207ENST00000483407 RRAGCQ9HB90 399 aa7.89□□□□□ -1.15
CSDE1-207ENST00000483407 N4BP2Q86UW6 1770 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-207ENST00000483407 KIAA1551Q9HCM1 1747 aa7.89□□□□□ -1.15
CSDE1-207ENST00000483407 MRC1P22897 1456 aa7.88□□□□□ -1.15
CSDE1-207ENST00000483407 KIF7Q2M1P5 1343 aa7.88□□□□□ -1.15
CSDE1-207ENST00000483407 H0YIN7 160 aa7.88□□□□□ -1.15
CSDE1-207ENST00000483407 HRO43593 1189 aa7.88□□□□□ -1.15
CSDE1-207ENST00000483407 ACTN4O43707 911 aaKnown RBP7.88□□□□□ -1.15
CSDE1-207ENST00000483407 RNF40O75150 1001 aa7.88□□□□□ -1.15
CSDE1-207ENST00000483407 CANXP27824 592 aaKnown RBP7.88□□□□□ -1.15
CSDE1-207ENST00000483407 TEFQ10587 303 aa7.88□□□□□ -1.15
CSDE1-207ENST00000483407 IRF5Q13568 498 aa7.88□□□□□ -1.15
CSDE1-207ENST00000483407 MORN1Q5T089 497 aa7.88□□□□□ -1.15
CSDE1-207ENST00000483407 CC2D1BQ5T0F9 858 aaKnown RBP7.88□□□□□ -1.15
CSDE1-207ENST00000483407 SMC1BQ8NDV3 1235 aa7.88□□□□□ -1.15
CSDE1-207ENST00000483407 GAS2L2Q8NHY3 880 aa7.88□□□□□ -1.15
CSDE1-207ENST00000483407 LRCH3Q96II8 777 aa7.88□□□□□ -1.15
CSDE1-207ENST00000483407 TEX13AQ9BXU3 409 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-207ENST00000483407 PDZRN3Q9UPQ7 1066 aa7.88□□□□□ -1.15
CSDE1-207ENST00000483407 KCPQ6ZWJ8 1503 aa7.88□□□□□ -1.15
CSDE1-207ENST00000483407 POM121CA8CG34 1229 aa7.87□□□□□ -1.15
CSDE1-207ENST00000483407 U2SURPO15042 1029 aaKnown RBP7.87□□□□□ -1.15
CSDE1-207ENST00000483407 NPHP1O15259 732 aa7.87□□□□□ -1.15
CSDE1-207ENST00000483407 GPR37L1O60883 481 aa7.87□□□□□ -1.15
CSDE1-207ENST00000483407 VEGFAP15692 232 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-207ENST00000483407 RASSF7Q02833 373 aa7.87□□□□□ -1.15
CSDE1-207ENST00000483407 BICDL1Q6ZP65 573 aa7.87□□□□□ -1.15
CSDE1-207ENST00000483407 C2CD5Q86YS7 1000 aa7.87□□□□□ -1.15
CSDE1-207ENST00000483407 LRRN4Q8WUT4 740 aa7.87□□□□□ -1.15
CSDE1-207ENST00000483407 KLRG1Q96E93 195 aa7.87□□□□□ -1.15
CSDE1-207ENST00000483407 MYH14Q7Z406 1995 aaKnown RBP7.87□□□□□ -1.15
CSDE1-207ENST00000483407 TJP1Q07157 1748 aa7.86□□□□□ -1.15
CSDE1-207ENST00000483407 GLTPD2A6NH11 291 aa7.86□□□□□ -1.15
CSDE1-207ENST00000483407 GNAT3A8MTJ3 354 aa7.86□□□□□ -1.15
CSDE1-207ENST00000483407 PER1O15534 1290 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-207ENST00000483407 PDE6BP35913 854 aa7.86□□□□□ -1.15
CSDE1-207ENST00000483407 EIF5P55010 431 aaKnown RBP7.86□□□□□ -1.15
CSDE1-207ENST00000483407 ZNF790Q6PG37 636 aa7.86□□□□□ -1.15
CSDE1-207ENST00000483407 PRR7Q8TB68 274 aa7.86□□□□□ -1.15
CSDE1-207ENST00000483407 TSC1Q92574 1164 aa7.86□□□□□ -1.15
CSDE1-207ENST00000483407 SYMPKQ92797 1274 aaKnown RBP7.86□□□□□ -1.15
CSDE1-207ENST00000483407 CALR3Q96L12 384 aaKnown RBP7.86□□□□□ -1.15
CSDE1-207ENST00000483407 PRR14Q9BWN1 585 aa7.86□□□□□ -1.15
CSDE1-207ENST00000483407 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-207ENST00000483407 IL6STP40189 918 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-207ENST00000483407 HTRA3P83110 453 aa7.85□□□□□ -1.15
CSDE1-207ENST00000483407 CNGB1Q14028 1251 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-207ENST00000483407 WASHC4Q2M389 1173 aa7.85□□□□□ -1.15
CSDE1-207ENST00000483407 TBC1D9BQ66K14 1250 aa7.85□□□□□ -1.15
CSDE1-207ENST00000483407 DESI1Q6ICB0 168 aa7.85□□□□□ -1.15
CSDE1-207ENST00000483407 RETREG3Q86VR2 466 aa7.85□□□□□ -1.15
CSDE1-207ENST00000483407 JMYQ8N9B5 988 aa7.85□□□□□ -1.15
CSDE1-207ENST00000483407 GLMNQ92990 594 aa7.85□□□□□ -1.15
CSDE1-207ENST00000483407 ZNF622Q969S3 477 aaKnown RBP eCLIP7.85□□□□□ -1.15
CSDE1-207ENST00000483407 ZNF496Q96IT1 587 aaPredicted RBP7.85□□□□□ -1.15
CSDE1-207ENST00000483407 FMNL2Q96PY5 1086 aa7.85□□□□□ -1.15
CSDE1-207ENST00000483407 BRIP1Q9BX63 1249 aa7.85□□□□□ -1.15
CSDE1-207ENST00000483407 SLC27A5Q9Y2P5 690 aa7.85□□□□□ -1.15
CSDE1-207ENST00000483407 CARMIL3Q8ND23 1372 aa7.84□□□□□ -1.15
CSDE1-207ENST00000483407 NPC1L1Q9UHC9 1359 aa7.84□□□□□ -1.15
CSDE1-207ENST00000483407 HEG1Q9ULI3 1381 aa7.84□□□□□ -1.15
CSDE1-207ENST00000483407 SCN11AQ9UI33 1791 aa7.84□□□□□ -1.15
CSDE1-207ENST00000483407 BRCA1P38398 1863 aaKnown RBP7.84□□□□□ -1.15
CSDE1-207ENST00000483407 NFKBIEO00221 500 aa7.84□□□□□ -1.15
CSDE1-207ENST00000483407 ST5P78524 1137 aa7.84□□□□□ -1.15
CSDE1-207ENST00000483407 Q3C1V9 767 aa7.84□□□□□ -1.15
CSDE1-207ENST00000483407 PUS10Q3MIT2 529 aaKnown RBP7.84□□□□□ -1.15
CSDE1-207ENST00000483407 ERFEQ4G0M1 354 aa7.84□□□□□ -1.15
CSDE1-207ENST00000483407 COL13A1Q5TAT6 717 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-207ENST00000483407 IL17REQ8NFR9 667 aa7.84□□□□□ -1.15
CSDE1-207ENST00000483407 CFAP53Q96M91 514 aa7.84□□□□□ -1.15
CSDE1-207ENST00000483407 SETDB2Q96T68 719 aa7.84□□□□□ -1.15
CSDE1-207ENST00000483407 ARFGEF1Q9Y6D6 1849 aa7.84□□□□□ -1.15
CSDE1-207ENST00000483407 BTBD11A6QL63 1104 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 407.1 ms